RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ABCB7O75027 752 aa5.06□□□□□ -1.6
NEDD4-209ENST00000508871 GNL2Q13823 731 aaKnown RBP5.06□□□□□ -1.6
NEDD4-209ENST00000508871 SF3A1Q15459 793 aaKnown RBP5.06□□□□□ -1.6
NEDD4-209ENST00000508871 GLI2P10070 1586 aa5.06□□□□□ -1.6
NEDD4-209ENST00000508871 POLR1AO95602 1720 aaPredicted RBP5.06□□□□□ -1.6
NEDD4-209ENST00000508871 MRS2Q9HD23 443 aa5.06□□□□□ -1.6
NEDD4-209ENST00000508871 DHX57Q6P158 1386 aaKnown RBP5.06□□□□□ -1.6
NEDD4-209ENST00000508871 TSNAXIP1Q2TAA8 658 aa5.06□□□□□ -1.6
NEDD4-209ENST00000508871 ABCC1P33527 1531 aa5.06□□□□□ -1.6
NEDD4-209ENST00000508871 ERCC6L2Q5T890 1561 aa5.06□□□□□ -1.6
NEDD4-209ENST00000508871 DEPDC5O75140 1603 aa5.05□□□□□ -1.6
NEDD4-209ENST00000508871 KIAA1107Q9UPP5 1409 aa5.05□□□□□ -1.6
NEDD4-209ENST00000508871 PPP1R15AO75807 674 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-209ENST00000508871 CEP89Q96ST8 783 aa5.05□□□□□ -1.6
NEDD4-209ENST00000508871 IQGAP3Q86VI3 1631 aa5.05□□□□□ -1.6
NEDD4-209ENST00000508871 MAP3K4Q9Y6R4 1608 aa5.05□□□□□ -1.6
NEDD4-209ENST00000508871 NUTM2BA6NNL0 878 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-209ENST00000508871 NUTM2EB1AL46 878 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-209ENST00000508871 NUTM2DQ5VT03 806 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-209ENST00000508871 NUTM2AQ8IVF1 878 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-209ENST00000508871 SLKQ9H2G2 1235 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-209ENST00000508871 R3HCC1Q9Y3T6 440 aaKnown RBP5.05□□□□□ -1.6
NEDD4-209ENST00000508871 INO80Q9ULG1 1556 aaPredicted RBP5.04□□□□□ -1.6
NEDD4-209ENST00000508871 ABL1P00519 1130 aa5.04□□□□□ -1.6
NEDD4-209ENST00000508871 PYGBP11216 843 aa5.04□□□□□ -1.6
NEDD4-209ENST00000508871 NEURL4Q96JN8 1562 aa5.04□□□□□ -1.6
NEDD4-209ENST00000508871 APPP05067 770 aa5.04□□□□□ -1.6
NEDD4-209ENST00000508871 MORC4Q8TE76 937 aa5.04□□□□□ -1.6
NEDD4-209ENST00000508871 SREK1Q8WXA9 508 aaKnown RBP5.04□□□□□ -1.6
NEDD4-209ENST00000508871 RNF187Q5TA31 235 aaPredicted RBP5.04□□□□□ -1.6
NEDD4-209ENST00000508871 DNAJC2Q99543 621 aaKnown RBP5.04□□□□□ -1.6
NEDD4-209ENST00000508871 WDHD1O75717 1129 aaPredicted RBP5.04□□□□□ -1.6
NEDD4-209ENST00000508871 CCDC141Q6ZP82 1450 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 NAIPQ13075 1403 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 PPP1R12AO14974 1030 aaPredicted RBP5.03□□□□□ -1.6
NEDD4-209ENST00000508871 HOXD11P31277 338 aaPredicted RBP5.03□□□□□ -1.6
NEDD4-209ENST00000508871 RAB3GAP2Q9H2M9 1393 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 ABCC5O15440 1437 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 SRPK2P78362 688 aaKnown RBP5.03□□□□□ -1.6
NEDD4-209ENST00000508871 BARGINQ6ZT62 677 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 WDR75Q8IWA0 830 aaKnown RBP5.03□□□□□ -1.6
NEDD4-209ENST00000508871 FAM13BQ9NYF5 915 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 BRPF3Q9ULD4 1205 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 MAGI2Q86UL8 1455 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 DUOX2Q9NRD8 1548 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 PLIN1O60240 522 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 PIK3R5Q8WYR1 880 aa5.03□□□□□ -1.6
NEDD4-209ENST00000508871 EXOC8Q8IYI6 725 aa5.02□□□□□ -1.61
NEDD4-209ENST00000508871 PDILTQ8N807 584 aa5.02□□□□□ -1.61
NEDD4-209ENST00000508871 MRRFQ96E11 262 aaKnown RBP5.02□□□□□ -1.61
NEDD4-209ENST00000508871 ZC3H13Q5T200 1668 aaKnown RBP5.02□□□□□ -1.61
NEDD4-209ENST00000508871 FAM135AQ9P2D6 1515 aa5.02□□□□□ -1.61
NEDD4-209ENST00000508871 RNF17Q9BXT8 1623 aaKnown RBP5.02□□□□□ -1.61
NEDD4-209ENST00000508871 TPD52L2O43399 206 aaKnown RBP5.02□□□□□ -1.61
NEDD4-209ENST00000508871 RTEL1-TNFRSF6BF6WH68 1400 aa5.02□□□□□ -1.61
NEDD4-209ENST00000508871 ERBINQ96RT1 1412 aa5.02□□□□□ -1.61
NEDD4-209ENST00000508871 ARHGAP5Q13017 1502 aa5.02□□□□□ -1.61
NEDD4-209ENST00000508871 ERCC5P28715 1186 aaPredicted RBP5.02□□□□□ -1.61
NEDD4-209ENST00000508871 RGS22Q8NE09 1264 aa5.02□□□□□ -1.61
NEDD4-209ENST00000508871 TCEAL9Q9UHQ7 104 aa5.02□□□□□ -1.61
NEDD4-209ENST00000508871 PLCH2O75038 1416 aa5.02□□□□□ -1.61
NEDD4-209ENST00000508871 HIRIP3Q9BW71 556 aaPredicted RBP5.02□□□□□ -1.61
NEDD4-209ENST00000508871 LAMC1P11047 1609 aa5.01□□□□□ -1.61
NEDD4-209ENST00000508871 CCDC85CA6NKD9 419 aa5.01□□□□□ -1.61
NEDD4-209ENST00000508871 TRIM66O15016 1216 aa5.01□□□□□ -1.61
NEDD4-209ENST00000508871 LMOD1P29536 600 aaPredicted RBP5.01□□□□□ -1.61
NEDD4-209ENST00000508871 RIMBP3CA6NJZ7 1639 aa5.01□□□□□ -1.61
NEDD4-209ENST00000508871 RIMBP3BA6NNM3 1639 aa5.01□□□□□ -1.61
NEDD4-209ENST00000508871 RIMBP3Q9UFD9 1639 aa5.01□□□□□ -1.61
NEDD4-209ENST00000508871 PTPRKQ15262 1439 aa5.01□□□□□ -1.61
NEDD4-209ENST00000508871 KDM6BO15054 1643 aa5.01□□□□□ -1.61
NEDD4-209ENST00000508871 TEX14Q8IWB6 1497 aa5.01□□□□□ -1.61
NEDD4-209ENST00000508871 CT47A1Q5JQC4 288 aaPredicted RBP5.01□□□□□ -1.61
NEDD4-209ENST00000508871 CEP152O94986 1710 aa5.01□□□□□ -1.61
NEDD4-209ENST00000508871 KDM5CP41229 1560 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 DNAJA1P31689 397 aaKnown RBP5□□□□□ -1.61
NEDD4-209ENST00000508871 MICAL1Q8TDZ2 1067 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 G3BP2Q9UN86 482 aaKnown RBP5□□□□□ -1.61
NEDD4-209ENST00000508871 PDE4AP27815 886 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 WDR3Q9UNX4 943 aaKnown RBP eCLIP5□□□□□ -1.61
NEDD4-209ENST00000508871 MBD5Q9P267 1494 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 TCF3P15923 654 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 KCNA1Q09470 495 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 ZFYVE16Q7Z3T8 1539 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 SYCP2Q9BX26 1530 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 PLEKHD1A6NEE1 506 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 FOXD4L6Q3SYB3 417 aaPredicted RBP5□□□□□ -1.61
NEDD4-209ENST00000508871 FOXD4L3Q6VB84 417 aaPredicted RBP5□□□□□ -1.61
NEDD4-209ENST00000508871 GDPD2Q9HCC8 539 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 TET3O43151 1660 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 ANKRD30AQ9BXX3 1397 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 PPARGC1BQ86YN6 1023 aaKnown RBP5□□□□□ -1.61
NEDD4-209ENST00000508871 VRTNQ9H8Y1 702 aa5□□□□□ -1.61
NEDD4-209ENST00000508871 XPCQ01831 940 aaPredicted RBP4.99□□□□□ -1.61
NEDD4-209ENST00000508871 TTC16Q8NEE8 873 aa4.99□□□□□ -1.61
NEDD4-209ENST00000508871 C9orf84Q5VXU9 1444 aa4.99□□□□□ -1.61
NEDD4-209ENST00000508871 U2SURPO15042 1029 aaKnown RBP4.99□□□□□ -1.61
NEDD4-209ENST00000508871 CCSER2Q9H7U1 834 aa4.99□□□□□ -1.61
NEDD4-209ENST00000508871 IQSEC3Q9UPP2 1182 aaPredicted RBP4.99□□□□□ -1.61
NEDD4-209ENST00000508871 A6NJR5 290 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms