RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 ESCO1Q5FWF5 840 aa14.82□□□□□ -0.04
UBE2D3-227ENST00000508818 NALCNQ8IZF0 1738 aa14.82□□□□□ -0.04
UBE2D3-227ENST00000508818 SETD1AO15047 1707 aaKnown RBP14.81□□□□□ -0.04
UBE2D3-227ENST00000508818 WAPLQ7Z5K2 1190 aa14.81□□□□□ -0.04
UBE2D3-227ENST00000508818 LRPPRCP42704 1394 aaKnown RBP14.81□□□□□ -0.04
UBE2D3-227ENST00000508818 PRAG1Q86YV5 1406 aa14.8□□□□□ -0.04
UBE2D3-227ENST00000508818 LRP6O75581 1613 aa14.8□□□□□ -0.04
UBE2D3-227ENST00000508818 SHPRHQ149N8 1683 aa14.8□□□□□ -0.04
UBE2D3-227ENST00000508818 ABCC11Q96J66 1382 aa14.79□□□□□ -0.04
UBE2D3-227ENST00000508818 C14orf93Q9H972 538 aaKnown RBP14.79□□□□□ -0.04
UBE2D3-227ENST00000508818 PIK3C2GO75747 1445 aa14.78□□□□□ -0.04
UBE2D3-227ENST00000508818 DHX57Q6P158 1386 aaKnown RBP14.78□□□□□ -0.04
UBE2D3-227ENST00000508818 NUTM2FA1L443 756 aa14.78□□□□□ -0.04
UBE2D3-227ENST00000508818 CFAP70Q5T0N1 1121 aa14.78□□□□□ -0.04
UBE2D3-227ENST00000508818 NHSL1Q5SYE7 1610 aa14.77□□□□□ -0.04
UBE2D3-227ENST00000508818 HRCP23327 699 aa14.77□□□□□ -0.05
UBE2D3-227ENST00000508818 RXRBP28702 533 aa14.77□□□□□ -0.05
UBE2D3-227ENST00000508818 C8orf37Q96NL8 207 aa14.77□□□□□ -0.05
UBE2D3-227ENST00000508818 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.05
UBE2D3-227ENST00000508818 YTHDC2Q9H6S0 1430 aaKnown RBP14.76□□□□□ -0.05
UBE2D3-227ENST00000508818 PNPLA6Q8IY17 1366 aa14.76□□□□□ -0.05
UBE2D3-227ENST00000508818 AFF2P51816 1311 aa14.76□□□□□ -0.05
UBE2D3-227ENST00000508818 SOS2Q07890 1332 aaPredicted RBP14.76□□□□□ -0.05
UBE2D3-227ENST00000508818 NPHP3Q7Z494 1330 aa14.76□□□□□ -0.05
UBE2D3-227ENST00000508818 ADAMTS2O95450 1211 aa14.76□□□□□ -0.05
UBE2D3-227ENST00000508818 SIRT1Q96EB6 747 aa14.76□□□□□ -0.05
UBE2D3-227ENST00000508818 NGLY1Q96IV0 654 aa14.76□□□□□ -0.05
UBE2D3-227ENST00000508818 TECPR2O15040 1411 aa14.75□□□□□ -0.05
UBE2D3-227ENST00000508818 IFT172Q9UG01 1749 aa14.75□□□□□ -0.05
UBE2D3-227ENST00000508818 FOXO3O43524 673 aa14.75□□□□□ -0.05
UBE2D3-227ENST00000508818 POGKQ9P215 609 aa14.75□□□□□ -0.05
UBE2D3-227ENST00000508818 DCAF11Q8TEB1 546 aa14.74□□□□□ -0.05
UBE2D3-227ENST00000508818 PLEKHH1Q9ULM0 1364 aa14.73□□□□□ -0.05
UBE2D3-227ENST00000508818 XPCQ01831 940 aaPredicted RBP14.73□□□□□ -0.05
UBE2D3-227ENST00000508818 SAFB2Q14151 953 aaKnown RBP eCLIP14.73□□□□□ -0.05
UBE2D3-227ENST00000508818 CDC42BPGQ6DT37 1551 aa14.73□□□□□ -0.05
UBE2D3-227ENST00000508818 MYOM2P54296 1465 aa14.72□□□□□ -0.05
UBE2D3-227ENST00000508818 PRAM1Q96QH2 718 aa14.72□□□□□ -0.05
UBE2D3-227ENST00000508818 QTRT2Q9H974 415 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-227ENST00000508818 STAC3Q96MF2 364 aa14.71□□□□□ -0.05
UBE2D3-227ENST00000508818 NRXN1Q9ULB1 1477 aa14.69□□□□□ -0.06
UBE2D3-227ENST00000508818 RBM6P78332 1123 aaKnown RBP14.69□□□□□ -0.06
UBE2D3-227ENST00000508818 TRAK1Q9UPV9 953 aa14.69□□□□□ -0.06
UBE2D3-227ENST00000508818 KNDC1Q76NI1 1749 aa14.69□□□□□ -0.06
UBE2D3-227ENST00000508818 LAMC1P11047 1609 aa14.68□□□□□ -0.06
UBE2D3-227ENST00000508818 PSME1Q06323 249 aa14.68□□□□□ -0.06
UBE2D3-227ENST00000508818 KRT28Q7Z3Y7 464 aa14.68□□□□□ -0.06
UBE2D3-227ENST00000508818 USP21Q9UK80 565 aa14.68□□□□□ -0.06
UBE2D3-227ENST00000508818 PHF8Q9UPP1 1060 aa14.68□□□□□ -0.06
UBE2D3-227ENST00000508818 NPM3O75607 178 aaKnown RBP14.67□□□□□ -0.06
UBE2D3-227ENST00000508818 HAP1P54257 671 aaPredicted RBP14.66□□□□□ -0.06
UBE2D3-227ENST00000508818 LMOD2Q6P5Q4 547 aa14.65□□□□□ -0.06
UBE2D3-227ENST00000508818 TRPC5Q9UL62 973 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-227ENST00000508818 PXDNQ92626 1479 aa14.64□□□□□ -0.07
UBE2D3-227ENST00000508818 HIRIP3Q9BW71 556 aaPredicted RBP14.64□□□□□ -0.07
UBE2D3-227ENST00000508818 MINK1Q8N4C8 1332 aaPredicted RBP14.64□□□□□ -0.07
UBE2D3-227ENST00000508818 FMN2Q9NZ56 1722 aa14.63□□□□□ -0.07
UBE2D3-227ENST00000508818 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
UBE2D3-227ENST00000508818 FNBP4Q8N3X1 1017 aaPredicted RBP14.63□□□□□ -0.07
UBE2D3-227ENST00000508818 SPATA31A3Q5VYP0 1347 aa14.63□□□□□ -0.07
UBE2D3-227ENST00000508818 CDK12Q9NYV4 1490 aaPredicted RBP14.63□□□□□ -0.07
UBE2D3-227ENST00000508818 DLC1Q96QB1 1528 aa14.62□□□□□ -0.07
UBE2D3-227ENST00000508818 PMFBP1Q8TBY8 1022 aa14.62□□□□□ -0.07
UBE2D3-227ENST00000508818 UPF1Q92900 1129 aaKnown RBP eCLIP14.62□□□□□ -0.07
UBE2D3-227ENST00000508818 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
UBE2D3-227ENST00000508818 KIF1AQ12756 1690 aa14.61□□□□□ -0.07
UBE2D3-227ENST00000508818 EIF3AQ14152 1382 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-227ENST00000508818 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
UBE2D3-227ENST00000508818 COL22A1Q8NFW1 1626 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-227ENST00000508818 WASLO00401 505 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-227ENST00000508818 ADGRB1O14514 1584 aa14.59□□□□□ -0.07
UBE2D3-227ENST00000508818 GPRASP1Q5JY77 1395 aa14.59□□□□□ -0.07
UBE2D3-227ENST00000508818 ANKARQ7Z5J8 1434 aa14.58□□□□□ -0.07
UBE2D3-227ENST00000508818 NGDNQ8NEJ9 315 aaKnown RBP14.58□□□□□ -0.08
UBE2D3-227ENST00000508818 CABLES1Q8TDN4 633 aa14.57□□□□□ -0.08
UBE2D3-227ENST00000508818 SBNO1A3KN83 1393 aa14.57□□□□□ -0.08
UBE2D3-227ENST00000508818 ARHGEF10O15013 1369 aa14.57□□□□□ -0.08
UBE2D3-227ENST00000508818 RGPD8O14715 1765 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-227ENST00000508818 RGS12O14924 1447 aa14.57□□□□□ -0.08
UBE2D3-227ENST00000508818 TNS3Q68CZ2 1445 aa14.57□□□□□ -0.08
UBE2D3-227ENST00000508818 UNC5CLQ8IV45 518 aa14.56□□□□□ -0.08
UBE2D3-227ENST00000508818 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-227ENST00000508818 GJD4Q96KN9 370 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-227ENST00000508818 ATRNO75882 1429 aa14.55□□□□□ -0.08
UBE2D3-227ENST00000508818 NUDT16Q96DE0 195 aaKnown RBP14.54□□□□□ -0.08
UBE2D3-227ENST00000508818 CCDC9Q9Y3X0 531 aaKnown RBP14.54□□□□□ -0.08
UBE2D3-227ENST00000508818 BCL9LQ86UU0 1499 aa14.54□□□□□ -0.08
UBE2D3-227ENST00000508818 ADGRB2O60241 1585 aa14.53□□□□□ -0.08
UBE2D3-227ENST00000508818 ATAD2Q6PL18 1390 aa14.53□□□□□ -0.08
UBE2D3-227ENST00000508818 PRR36Q9H6K5 1346 aa14.53□□□□□ -0.08
UBE2D3-227ENST00000508818 CDK19Q9BWU1 502 aa14.53□□□□□ -0.08
UBE2D3-227ENST00000508818 NEUROD1Q13562 356 aa14.52□□□□□ -0.09
UBE2D3-227ENST00000508818 NBPF1Q3BBV0 1214 aa14.52□□□□□ -0.09
UBE2D3-227ENST00000508818 MARF1Q9Y4F3 1742 aaKnown RBP14.52□□□□□ -0.09
UBE2D3-227ENST00000508818 TULP4Q9NRJ4 1543 aa14.51□□□□□ -0.09
UBE2D3-227ENST00000508818 L3MBTL2Q969R5 705 aa14.5□□□□□ -0.09
UBE2D3-227ENST00000508818 USP32Q8NFA0 1604 aa14.5□□□□□ -0.09
UBE2D3-227ENST00000508818 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-227ENST00000508818 SIN3AQ96ST3 1273 aa14.49□□□□□ -0.09
UBE2D3-227ENST00000508818 CCDC61Q9Y6R9 512 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms