RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 PRAG1Q86YV5 1406 aa17.47■□□□□ 0.39
NEDD9-212ENST00000508800 GLI3P10071 1580 aa17.46■□□□□ 0.39
NEDD9-212ENST00000508800 DEFB132Q7Z7B7 95 aa17.45■□□□□ 0.38
NEDD9-212ENST00000508800 UNC5CLQ8IV45 518 aa17.45■□□□□ 0.38
NEDD9-212ENST00000508800 SLIT2O94813 1529 aa17.44■□□□□ 0.38
NEDD9-212ENST00000508800 ZNF326Q5BKZ1 582 aaKnown RBP17.44■□□□□ 0.38
NEDD9-212ENST00000508800 PXDNQ92626 1479 aa17.44■□□□□ 0.38
NEDD9-212ENST00000508800 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
NEDD9-212ENST00000508800 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
NEDD9-212ENST00000508800 HRCP23327 699 aa17.42■□□□□ 0.38
NEDD9-212ENST00000508800 NEXMIFQ5QGS0 1516 aa17.42■□□□□ 0.38
NEDD9-212ENST00000508800 CDC42BPGQ6DT37 1551 aa17.41■□□□□ 0.38
NEDD9-212ENST00000508800 BAG6P46379 1132 aa17.4■□□□□ 0.38
NEDD9-212ENST00000508800 FAM50AQ14320 339 aaKnown RBP17.4■□□□□ 0.38
NEDD9-212ENST00000508800 NUP155O75694 1391 aa17.4■□□□□ 0.38
NEDD9-212ENST00000508800 ROCK1Q13464 1354 aa17.4■□□□□ 0.38
NEDD9-212ENST00000508800 ROBO2Q9HCK4 1378 aa17.4■□□□□ 0.38
NEDD9-212ENST00000508800 SEPT12Q8IYM1 358 aa17.38■□□□□ 0.37
NEDD9-212ENST00000508800 USP32Q8NFA0 1604 aa17.38■□□□□ 0.37
NEDD9-212ENST00000508800 NWD2Q9ULI1 1742 aa17.38■□□□□ 0.37
NEDD9-212ENST00000508800 ESCO1Q5FWF5 840 aa17.37■□□□□ 0.37
NEDD9-212ENST00000508800 KIF1BO60333 1816 aa17.37■□□□□ 0.37
NEDD9-212ENST00000508800 PSDA5PKW4 1024 aaPredicted RBP17.36■□□□□ 0.37
NEDD9-212ENST00000508800 KRT27Q7Z3Y8 459 aa17.36■□□□□ 0.37
NEDD9-212ENST00000508800 ONECUT3O60422 494 aaPredicted RBP17.35■□□□□ 0.37
NEDD9-212ENST00000508800 VPS72Q15906 364 aa17.35■□□□□ 0.37
NEDD9-212ENST00000508800 RGPD1P0DJD0 1748 aa17.34■□□□□ 0.37
NEDD9-212ENST00000508800 VGFO15240 615 aaPredicted RBP17.33■□□□□ 0.36
NEDD9-212ENST00000508800 FOXO3O43524 673 aa17.33■□□□□ 0.36
NEDD9-212ENST00000508800 KIF1AQ12756 1690 aa17.32■□□□□ 0.36
NEDD9-212ENST00000508800 CLTCL1P53675 1640 aa17.32■□□□□ 0.36
NEDD9-212ENST00000508800 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
NEDD9-212ENST00000508800 PLCH1Q4KWH8 1693 aa17.32■□□□□ 0.36
NEDD9-212ENST00000508800 YY1P25490 414 aa17.31■□□□□ 0.36
NEDD9-212ENST00000508800 DISP2A7MBM2 1401 aa17.3■□□□□ 0.36
NEDD9-212ENST00000508800 SPATA31A3Q5VYP0 1347 aa17.3■□□□□ 0.36
NEDD9-212ENST00000508800 XPCQ01831 940 aaPredicted RBP17.29■□□□□ 0.36
NEDD9-212ENST00000508800 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
NEDD9-212ENST00000508800 CCDC9Q9Y3X0 531 aaKnown RBP17.27■□□□□ 0.36
NEDD9-212ENST00000508800 NAIPQ13075 1403 aa17.27■□□□□ 0.35
NEDD9-212ENST00000508800 R3HDM1Q15032 1099 aaKnown RBP17.26■□□□□ 0.35
NEDD9-212ENST00000508800 RPGRIP1LQ68CZ1 1315 aa17.25■□□□□ 0.35
NEDD9-212ENST00000508800 ADGRB2O60241 1585 aa17.25■□□□□ 0.35
NEDD9-212ENST00000508800 TNS3Q68CZ2 1445 aa17.24■□□□□ 0.35
NEDD9-212ENST00000508800 ABCA3Q99758 1704 aa17.24■□□□□ 0.35
NEDD9-212ENST00000508800 FMN2Q9NZ56 1722 aa17.24■□□□□ 0.35
NEDD9-212ENST00000508800 A0A0G2JS52 829 aa17.23■□□□□ 0.35
NEDD9-212ENST00000508800 MYT1Q01538 1121 aa17.23■□□□□ 0.35
NEDD9-212ENST00000508800 EN1Q05925 392 aaPredicted RBP17.23■□□□□ 0.35
NEDD9-212ENST00000508800 PPLO60437 1756 aa17.23■□□□□ 0.35
NEDD9-212ENST00000508800 TECPR2O15040 1411 aa17.22■□□□□ 0.35
NEDD9-212ENST00000508800 TNS1Q9HBL0 1735 aaKnown RBP17.22■□□□□ 0.35
NEDD9-212ENST00000508800 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
NEDD9-212ENST00000508800 PARD3Q8TEW0 1356 aa17.21■□□□□ 0.35
NEDD9-212ENST00000508800 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.35
NEDD9-212ENST00000508800 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
NEDD9-212ENST00000508800 PSME1Q06323 249 aa17.21■□□□□ 0.35
NEDD9-212ENST00000508800 NRAPQ86VF7 1730 aa17.21■□□□□ 0.35
NEDD9-212ENST00000508800 KRT28Q7Z3Y7 464 aa17.2■□□□□ 0.34
NEDD9-212ENST00000508800 KNDC1Q76NI1 1749 aa17.19■□□□□ 0.34
NEDD9-212ENST00000508800 SBNO1A3KN83 1393 aa17.18■□□□□ 0.34
NEDD9-212ENST00000508800 FAM98CQ17RN3 349 aaKnown RBP17.18■□□□□ 0.34
NEDD9-212ENST00000508800 NUTM2FA1L443 756 aa17.16■□□□□ 0.34
NEDD9-212ENST00000508800 COL14A1Q05707 1796 aaKnown RBP17.15■□□□□ 0.34
NEDD9-212ENST00000508800 THSD7AQ9UPZ6 1657 aa17.15■□□□□ 0.34
NEDD9-212ENST00000508800 ABCC11Q96J66 1382 aa17.15■□□□□ 0.34
NEDD9-212ENST00000508800 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
NEDD9-212ENST00000508800 IFT172Q9UG01 1749 aa17.14■□□□□ 0.33
NEDD9-212ENST00000508800 CABLES1Q8TDN4 633 aa17.14■□□□□ 0.33
NEDD9-212ENST00000508800 FAM83GA6ND36 823 aa17.13■□□□□ 0.33
NEDD9-212ENST00000508800 CAMKK2Q96RR4 588 aa17.13■□□□□ 0.33
NEDD9-212ENST00000508800 RREB1Q92766 1687 aa17.13■□□□□ 0.33
NEDD9-212ENST00000508800 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
NEDD9-212ENST00000508800 NRXN1Q9ULB1 1477 aa17.12■□□□□ 0.33
NEDD9-212ENST00000508800 EZH2Q15910 746 aaKnown RBP17.12■□□□□ 0.33
NEDD9-212ENST00000508800 PHF8Q9UPP1 1060 aa17.12■□□□□ 0.33
NEDD9-212ENST00000508800 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
NEDD9-212ENST00000508800 WAPLQ7Z5K2 1190 aa17.11■□□□□ 0.33
NEDD9-212ENST00000508800 FAM196AQ6ZSG2 479 aa17.1■□□□□ 0.33
NEDD9-212ENST00000508800 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
NEDD9-212ENST00000508800 PPP1R1BQ9UD71 204 aaPredicted RBP17.1■□□□□ 0.33
NEDD9-212ENST00000508800 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
NEDD9-212ENST00000508800 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
NEDD9-212ENST00000508800 NBPF8Q3BBV2 869 aa17.09■□□□□ 0.33
NEDD9-212ENST00000508800 NBPF14Q5TI25 921 aa17.09■□□□□ 0.33
NEDD9-212ENST00000508800 LMOD2Q6P5Q4 547 aa17.09■□□□□ 0.33
NEDD9-212ENST00000508800 SPON1Q9HCB6 807 aa17.09■□□□□ 0.33
NEDD9-212ENST00000508800 NUP188Q5SRE5 1749 aa17.09■□□□□ 0.33
NEDD9-212ENST00000508800 STK26Q9P289 416 aa17.08■□□□□ 0.32
NEDD9-212ENST00000508800 UTRNP46939 3433 aa17.08■□□□□ 0.32
NEDD9-212ENST00000508800 FAM182BQ5T319 152 aa17.07■□□□□ 0.32
NEDD9-212ENST00000508800 SIRT1Q96EB6 747 aa17.07■□□□□ 0.32
NEDD9-212ENST00000508800 PLEKHH1Q9ULM0 1364 aa17.06■□□□□ 0.32
NEDD9-212ENST00000508800 ANKRD30BQ9BXX2 1392 aa17.05■□□□□ 0.32
NEDD9-212ENST00000508800 TRIM37O94972 964 aa17.05■□□□□ 0.32
NEDD9-212ENST00000508800 APBA3O96018 575 aa17.05■□□□□ 0.32
NEDD9-212ENST00000508800 ITGAEP38570 1179 aa17.05■□□□□ 0.32
NEDD9-212ENST00000508800 ANKARQ7Z5J8 1434 aa17.04■□□□□ 0.32
NEDD9-212ENST00000508800 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
NEDD9-212ENST00000508800 TRPM3Q9HCF6 1732 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms