RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 CDCA8Q53HL2 280 aa10.9□□□□□ -0.66
NR1I3-226ENST00000508740 IFT172Q9UG01 1749 aa10.89□□□□□ -0.67
NR1I3-226ENST00000508740 NUTM2DQ5VT03 806 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-226ENST00000508740 PER1O15534 1290 aaPredicted RBP10.88□□□□□ -0.67
NR1I3-226ENST00000508740 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
NR1I3-226ENST00000508740 IQGAP1P46940 1657 aa10.88□□□□□ -0.67
NR1I3-226ENST00000508740 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-226ENST00000508740 SETBP1Q9Y6X0 1596 aa10.87□□□□□ -0.67
NR1I3-226ENST00000508740 RALBP1Q15311 655 aa10.87□□□□□ -0.67
NR1I3-226ENST00000508740 CCDC184Q52MB2 194 aa10.87□□□□□ -0.67
NR1I3-226ENST00000508740 TMEM132EQ6IEE7 984 aa10.87□□□□□ -0.67
NR1I3-226ENST00000508740 PANK3Q9H999 370 aa10.87□□□□□ -0.67
NR1I3-226ENST00000508740 NEXMIFQ5QGS0 1516 aa10.87□□□□□ -0.67
NR1I3-226ENST00000508740 PPLO60437 1756 aa10.86□□□□□ -0.67
NR1I3-226ENST00000508740 MRS2Q9HD23 443 aa10.86□□□□□ -0.67
NR1I3-226ENST00000508740 TRAK1Q9UPV9 953 aa10.86□□□□□ -0.67
NR1I3-226ENST00000508740 KTN1Q86UP2 1357 aaKnown RBP10.86□□□□□ -0.67
NR1I3-226ENST00000508740 CENPJQ9HC77 1338 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-226ENST00000508740 TMEM131LA2VDJ0 1609 aa10.85□□□□□ -0.67
NR1I3-226ENST00000508740 HSPA1LP34931 641 aa10.84□□□□□ -0.67
NR1I3-226ENST00000508740 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
NR1I3-226ENST00000508740 THEMISQ8N1K5 641 aaPredicted RBP10.84□□□□□ -0.67
NR1I3-226ENST00000508740 GTF3C3Q9Y5Q9 886 aa10.84□□□□□ -0.67
NR1I3-226ENST00000508740 SBNO2Q9Y2G9 1366 aa10.84□□□□□ -0.67
NR1I3-226ENST00000508740 NLRP1Q9C000 1473 aa10.84□□□□□ -0.67
NR1I3-226ENST00000508740 ADGRB1O14514 1584 aa10.84□□□□□ -0.67
NR1I3-226ENST00000508740 TNRQ92752 1358 aa10.83□□□□□ -0.68
NR1I3-226ENST00000508740 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
NR1I3-226ENST00000508740 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
NR1I3-226ENST00000508740 MED14O60244 1454 aa10.82□□□□□ -0.68
NR1I3-226ENST00000508740 HDGFP51858 240 aaKnown RBP10.81□□□□□ -0.68
NR1I3-226ENST00000508740 PIP4K2BP78356 416 aa10.81□□□□□ -0.68
NR1I3-226ENST00000508740 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.81□□□□□ -0.68
NR1I3-226ENST00000508740 RIMS2Q9UQ26 1411 aa10.81□□□□□ -0.68
NR1I3-226ENST00000508740 MYBBP1AQ9BQG0 1328 aaKnown RBP10.81□□□□□ -0.68
NR1I3-226ENST00000508740 PARD3Q8TEW0 1356 aa10.8□□□□□ -0.68
NR1I3-226ENST00000508740 FAM9BQ8IZU0 186 aa10.8□□□□□ -0.68
NR1I3-226ENST00000508740 PUS7Q96PZ0 661 aaKnown RBP10.8□□□□□ -0.68
NR1I3-226ENST00000508740 KNSTRNQ9Y448 316 aa10.8□□□□□ -0.68
NR1I3-226ENST00000508740 HNRNPUQ00839 825 aaKnown RBP eCLIP10.79□□□□□ -0.68
NR1I3-226ENST00000508740 TMC1Q8TDI8 760 aa10.79□□□□□ -0.68
NR1I3-226ENST00000508740 STK26Q9P289 416 aa10.79□□□□□ -0.68
NR1I3-226ENST00000508740 BRD4O60885 1362 aaPredicted RBP10.78□□□□□ -0.68
NR1I3-226ENST00000508740 NPHP4O75161 1426 aaPredicted RBP10.78□□□□□ -0.68
NR1I3-226ENST00000508740 CC2D1BQ5T0F9 858 aaKnown RBP10.78□□□□□ -0.68
NR1I3-226ENST00000508740 NLRP13Q86W25 1043 aa10.78□□□□□ -0.68
NR1I3-226ENST00000508740 PNISRQ8TF01 805 aaKnown RBP10.78□□□□□ -0.68
NR1I3-226ENST00000508740 EVC2Q86UK5 1308 aa10.77□□□□□ -0.69
NR1I3-226ENST00000508740 YTHDC2Q9H6S0 1430 aaKnown RBP10.76□□□□□ -0.69
NR1I3-226ENST00000508740 ASXL1Q8IXJ9 1541 aa10.76□□□□□ -0.69
NR1I3-226ENST00000508740 MYO5BQ9ULV0 1848 aa10.76□□□□□ -0.69
NR1I3-226ENST00000508740 ALKQ9UM73 1620 aa10.76□□□□□ -0.69
NR1I3-226ENST00000508740 NPC1L1Q9UHC9 1359 aa10.76□□□□□ -0.69
NR1I3-226ENST00000508740 TMEM2Q9UHN6 1383 aa10.76□□□□□ -0.69
NR1I3-226ENST00000508740 PRAM1Q96QH2 718 aa10.75□□□□□ -0.69
NR1I3-226ENST00000508740 POGKQ9P215 609 aa10.75□□□□□ -0.69
NR1I3-226ENST00000508740 SAFB2Q14151 953 aaKnown RBP eCLIP10.74□□□□□ -0.69
NR1I3-226ENST00000508740 CARD14Q9BXL6 1004 aa10.74□□□□□ -0.69
NR1I3-226ENST00000508740 SLC12A5Q9H2X9 1139 aa10.74□□□□□ -0.69
NR1I3-226ENST00000508740 LRPPRCP42704 1394 aaKnown RBP10.74□□□□□ -0.69
NR1I3-226ENST00000508740 KDM5AP29375 1690 aaKnown RBP10.73□□□□□ -0.69
NR1I3-226ENST00000508740 ABCC11Q96J66 1382 aa10.73□□□□□ -0.69
NR1I3-226ENST00000508740 SIRT1Q96EB6 747 aa10.72□□□□□ -0.69
NR1I3-226ENST00000508740 RBM42Q9BTD8 480 aaKnown RBP10.72□□□□□ -0.69
NR1I3-226ENST00000508740 CABP2Q9NPB3 220 aa10.72□□□□□ -0.69
NR1I3-226ENST00000508740 ZBED9Q6R2W3 1325 aa10.72□□□□□ -0.69
NR1I3-226ENST00000508740 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
NR1I3-226ENST00000508740 LTKP29376 864 aa10.71□□□□□ -0.69
NR1I3-226ENST00000508740 PPP2R1AP30153 589 aa10.71□□□□□ -0.69
NR1I3-226ENST00000508740 TXNDC2Q86VQ3 553 aa10.71□□□□□ -0.69
NR1I3-226ENST00000508740 BCANQ96GW7 911 aa10.71□□□□□ -0.69
NR1I3-226ENST00000508740 QRICH2Q9H0J4 1663 aa10.71□□□□□ -0.69
NR1I3-226ENST00000508740 ARHGEF28Q8N1W1 1705 aaKnown RBP10.7□□□□□ -0.7
NR1I3-226ENST00000508740 METP08581 1390 aa10.7□□□□□ -0.7
NR1I3-226ENST00000508740 MINK1Q8N4C8 1332 aaPredicted RBP10.7□□□□□ -0.7
NR1I3-226ENST00000508740 SRPK2P78362 688 aaKnown RBP10.7□□□□□ -0.7
NR1I3-226ENST00000508740 WAPLQ7Z5K2 1190 aa10.7□□□□□ -0.7
NR1I3-226ENST00000508740 EID1Q9Y6B2 187 aa10.7□□□□□ -0.7
NR1I3-226ENST00000508740 MYOM1P52179 1685 aa10.69□□□□□ -0.7
NR1I3-226ENST00000508740 DLC1Q96QB1 1528 aa10.69□□□□□ -0.7
NR1I3-226ENST00000508740 TULP4Q9NRJ4 1543 aa10.69□□□□□ -0.7
NR1I3-226ENST00000508740 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
NR1I3-226ENST00000508740 CDK19Q9BWU1 502 aa10.69□□□□□ -0.7
NR1I3-226ENST00000508740 ATAD2Q6PL18 1390 aa10.68□□□□□ -0.7
NR1I3-226ENST00000508740 PLEKHG1Q9ULL1 1385 aa10.68□□□□□ -0.7
NR1I3-226ENST00000508740 NINLQ9Y2I6 1382 aa10.68□□□□□ -0.7
NR1I3-226ENST00000508740 UBR1Q8IWV7 1749 aa10.68□□□□□ -0.7
NR1I3-226ENST00000508740 FAM135BQ49AJ0 1406 aa10.67□□□□□ -0.7
NR1I3-226ENST00000508740 NSD3Q9BZ95 1437 aa10.67□□□□□ -0.7
NR1I3-226ENST00000508740 ANKRD36BQ8N2N9 1353 aa10.67□□□□□ -0.7
NR1I3-226ENST00000508740 PLEKHH1Q9ULM0 1364 aa10.67□□□□□ -0.7
NR1I3-226ENST00000508740 NRXN3Q9Y4C0 1643 aa10.67□□□□□ -0.7
NR1I3-226ENST00000508740 PLCD3Q8N3E9 789 aa10.67□□□□□ -0.7
NR1I3-226ENST00000508740 ADAMTS13Q76LX8 1427 aa10.67□□□□□ -0.7
NR1I3-226ENST00000508740 INSRP06213 1382 aa10.66□□□□□ -0.7
NR1I3-226ENST00000508740 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
NR1I3-226ENST00000508740 SLIT1O75093 1534 aa10.66□□□□□ -0.7
NR1I3-226ENST00000508740 ARHGAP23Q9P227 1491 aa10.66□□□□□ -0.7
NR1I3-226ENST00000508740 TECPR2O15040 1411 aa10.66□□□□□ -0.7
NR1I3-226ENST00000508740 SETD1AO15047 1707 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms