RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 FAM117AQ9C073 453 aa3.64□□□□□ -1.83
SMN2-208ENST00000508258 FCF1Q9Y324 198 aaKnown RBP3.64□□□□□ -1.83
SMN2-208ENST00000508258 TNFRSF10AO00220 468 aa3.63□□□□□ -1.83
SMN2-208ENST00000508258 ZBTB24O43167 697 aaPredicted RBP3.63□□□□□ -1.83
SMN2-208ENST00000508258 USP46P62068 366 aa3.63□□□□□ -1.83
SMN2-208ENST00000508258 SPRYD7Q5W111 196 aa3.63□□□□□ -1.83
SMN2-208ENST00000508258 BRICD5Q6PL45 260 aa3.63□□□□□ -1.83
SMN2-208ENST00000508258 LIAT1Q6ZQX7 453 aa3.63□□□□□ -1.83
SMN2-208ENST00000508258 PARP9Q8IXQ6 854 aa3.63□□□□□ -1.83
SMN2-208ENST00000508258 CCDC24Q8N4L8 307 aa3.63□□□□□ -1.83
SMN2-208ENST00000508258 THAP11Q96EK4 314 aa3.63□□□□□ -1.83
SMN2-208ENST00000508258 FAM217BQ9NTX9 383 aaPredicted RBP3.63□□□□□ -1.83
SMN2-208ENST00000508258 SUPT5HO00267 1087 aaKnown RBP3.62□□□□□ -1.83
SMN2-208ENST00000508258 HOXA2O43364 376 aa3.62□□□□□ -1.83
SMN2-208ENST00000508258 SSTR3P32745 418 aaPredicted RBP3.62□□□□□ -1.83
SMN2-208ENST00000508258 GUCA2AQ02747 115 aa3.62□□□□□ -1.83
SMN2-208ENST00000508258 PKDCCQ504Y2 493 aa3.62□□□□□ -1.83
SMN2-208ENST00000508258 PLA2G2CQ5R387 149 aa3.62□□□□□ -1.83
SMN2-208ENST00000508258 GIGYF2Q6Y7W6 1299 aaKnown RBP3.62□□□□□ -1.83
SMN2-208ENST00000508258 ZNF598Q86UK7 904 aaKnown RBP3.62□□□□□ -1.83
SMN2-208ENST00000508258 HOMEZQ8IX15 550 aa3.62□□□□□ -1.83
SMN2-208ENST00000508258 FAM160A2Q8N612 972 aaPredicted RBP3.62□□□□□ -1.83
SMN2-208ENST00000508258 DDRGK1Q96HY6 314 aa3.62□□□□□ -1.83
SMN2-208ENST00000508258 USB1Q9BQ65 265 aaKnown RBP3.62□□□□□ -1.83
SMN2-208ENST00000508258 ZMYND15Q9H091 742 aa3.62□□□□□ -1.83
SMN2-208ENST00000508258 FAM187AA6NFU0 413 aa3.61□□□□□ -1.83
SMN2-208ENST00000508258 C6orf229H3BNL8 230 aa3.61□□□□□ -1.83
SMN2-208ENST00000508258 CD2BP2O95400 341 aaKnown RBP3.61□□□□□ -1.83
SMN2-208ENST00000508258 MSS51Q4VC12 460 aa3.61□□□□□ -1.83
SMN2-208ENST00000508258 TRAF7Q6Q0C0 670 aa3.61□□□□□ -1.83
SMN2-208ENST00000508258 EMID1Q96A84 441 aaPredicted RBP3.61□□□□□ -1.83
SMN2-208ENST00000508258 REPIN1Q9BWE0 567 aaKnown RBP3.61□□□□□ -1.83
SMN2-208ENST00000508258 GOPCQ9HD26 462 aa3.61□□□□□ -1.83
SMN2-208ENST00000508258 SALL2Q9Y467 1007 aaPredicted RBP3.61□□□□□ -1.83
SMN2-208ENST00000508258 FDX1P10109 184 aa3.6□□□□□ -1.83
SMN2-208ENST00000508258 SYMPKQ92797 1274 aaKnown RBP3.6□□□□□ -1.83
SMN2-208ENST00000508258 MS4A1P11836 297 aa3.59□□□□□ -1.83
SMN2-208ENST00000508258 NDUFV2P19404 249 aa3.59□□□□□ -1.83
SMN2-208ENST00000508258 TRIM67Q6ZTA4 783 aa3.59□□□□□ -1.83
SMN2-208ENST00000508258 BEGAINQ9BUH8 593 aa3.59□□□□□ -1.83
SMN2-208ENST00000508258 TTC24A2A3L6 582 aaPredicted RBP3.58□□□□□ -1.84
SMN2-208ENST00000508258 MOXD2PA6NHM9 499 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 RPIAP49247 311 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 MMP16P51512 607 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 PRR20EP86478 221 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 PRR20CP86479 221 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 PRR20DP86480 221 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 PRR20BP86481 221 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 PRR20AP86496 221 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 TRIM32Q13049 653 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 CSPP1Q1MSJ5 1256 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 CYP4X1Q8N118 509 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 SPIRE2Q8WWL2 714 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 RSPH6AQ9H0K4 717 aa3.58□□□□□ -1.84
SMN2-208ENST00000508258 ATP1B4Q9UN42 357 aaPredicted RBP3.58□□□□□ -1.84
SMN2-208ENST00000508258 GDF9O60383 454 aa3.57□□□□□ -1.84
SMN2-208ENST00000508258 DGAT1O75907 488 aa3.57□□□□□ -1.84
SMN2-208ENST00000508258 DXOO77932 396 aaKnown RBP3.57□□□□□ -1.84
SMN2-208ENST00000508258 JUNDP17535 347 aa3.57□□□□□ -1.84
SMN2-208ENST00000508258 RETREG3Q86VR2 466 aa3.57□□□□□ -1.84
SMN2-208ENST00000508258 TSC1Q92574 1164 aa3.57□□□□□ -1.84
SMN2-208ENST00000508258 NUDT12Q9BQG2 462 aa3.57□□□□□ -1.84
SMN2-208ENST00000508258 TBC1D2Q9BYX2 928 aa3.57□□□□□ -1.84
SMN2-208ENST00000508258 PKD2L1Q9P0L9 805 aa3.57□□□□□ -1.84
SMN2-208ENST00000508258 PCDHGC3Q9UN70 934 aa3.57□□□□□ -1.84
SMN2-208ENST00000508258 LCE2BO14633 110 aa3.56□□□□□ -1.84
SMN2-208ENST00000508258 FLIIQ13045 1269 aa3.56□□□□□ -1.84
SMN2-208ENST00000508258 MTMR2Q13614 643 aa3.56□□□□□ -1.84
SMN2-208ENST00000508258 DIXDC1Q155Q3 683 aa3.56□□□□□ -1.84
SMN2-208ENST00000508258 ZNF787Q6DD87 383 aa3.56□□□□□ -1.84
SMN2-208ENST00000508258 PRR7Q8TB68 274 aa3.56□□□□□ -1.84
SMN2-208ENST00000508258 NUTM2BA6NNL0 878 aaPredicted RBP3.55□□□□□ -1.84
SMN2-208ENST00000508258 NUTM2EB1AL46 878 aaPredicted RBP3.55□□□□□ -1.84
SMN2-208ENST00000508258 ST8SIA5O15466 376 aa3.55□□□□□ -1.84
SMN2-208ENST00000508258 MYT1Q01538 1121 aa3.55□□□□□ -1.84
SMN2-208ENST00000508258 SH3D19Q5HYK7 790 aa3.55□□□□□ -1.84
SMN2-208ENST00000508258 NUTM2DQ5VT03 806 aaPredicted RBP3.55□□□□□ -1.84
SMN2-208ENST00000508258 RIC3Q7Z5B4 369 aa3.55□□□□□ -1.84
SMN2-208ENST00000508258 NUTM2AQ8IVF1 878 aaPredicted RBP3.55□□□□□ -1.84
SMN2-208ENST00000508258 MRGPRX2Q96LB1 330 aa3.55□□□□□ -1.84
SMN2-208ENST00000508258 WNT7AO00755 349 aa3.54□□□□□ -1.84
SMN2-208ENST00000508258 CCNYL3P0C7X3 344 aa3.54□□□□□ -1.84
SMN2-208ENST00000508258 CTHP32929 405 aa3.54□□□□□ -1.84
SMN2-208ENST00000508258 LINC01559Q495D7 138 aa3.54□□□□□ -1.84
SMN2-208ENST00000508258 RC3H1Q5TC82 1133 aaKnown RBP3.54□□□□□ -1.84
SMN2-208ENST00000508258 RSBN1LQ6PCB5 846 aaPredicted RBP3.54□□□□□ -1.84
SMN2-208ENST00000508258 EHBP1Q8NDI1 1231 aa3.54□□□□□ -1.84
SMN2-208ENST00000508258 SNIP1Q8TAD8 396 aaKnown RBP3.54□□□□□ -1.84
SMN2-208ENST00000508258 PCMTD1Q96MG8 357 aaPredicted RBP3.54□□□□□ -1.84
SMN2-208ENST00000508258 ZBTB3Q9H5J0 574 aa3.54□□□□□ -1.84
SMN2-208ENST00000508258 C1orf115Q9H7X2 142 aa3.54□□□□□ -1.84
SMN2-208ENST00000508258 SPDYE5A6NIY4 337 aa3.53□□□□□ -1.84
SMN2-208ENST00000508258 A6NJR5 290 aa3.53□□□□□ -1.84
SMN2-208ENST00000508258 AXIN1O15169 862 aa3.53□□□□□ -1.84
SMN2-208ENST00000508258 ALDH1A1P00352 501 aa3.53□□□□□ -1.84
SMN2-208ENST00000508258 UBTFP17480 764 aaKnown RBP3.53□□□□□ -1.84
SMN2-208ENST00000508258 SKIV2LQ15477 1246 aaKnown RBP3.53□□□□□ -1.84
SMN2-208ENST00000508258 PTCRAQ6ISU1 281 aaPredicted RBP3.53□□□□□ -1.84
SMN2-208ENST00000508258 CABLES1Q8TDN4 633 aa3.53□□□□□ -1.84
SMN2-208ENST00000508258 TOR4AQ9NXH8 423 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms