RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 LRPPRCP42704 1394 aaKnown RBP21.29■■□□□ 1
NEDD4-207ENST00000508075 PRAG1Q86YV5 1406 aa21.29■■□□□ 1
NEDD4-207ENST00000508075 SAFB2Q14151 953 aaKnown RBP eCLIP21.28■■□□□ 1
NEDD4-207ENST00000508075 LRRC59Q96AG4 307 aaKnown RBP21.28■■□□□ 1
NEDD4-207ENST00000508075 KDM2AQ9Y2K7 1162 aa21.28■■□□□ 1
NEDD4-207ENST00000508075 ESCO1Q5FWF5 840 aa21.27■■□□□ 1
NEDD4-207ENST00000508075 RGPD8O14715 1765 aaPredicted RBP21.27■■□□□ 1
NEDD4-207ENST00000508075 YTHDC2Q9H6S0 1430 aaKnown RBP21.27■■□□□ 1
NEDD4-207ENST00000508075 CDC42BPGQ6DT37 1551 aa21.27■□□□□ 0.99
NEDD4-207ENST00000508075 ADAMTS2O95450 1211 aa21.26■□□□□ 0.99
NEDD4-207ENST00000508075 C8orf37Q96NL8 207 aa21.25■□□□□ 0.99
NEDD4-207ENST00000508075 AFF2P51816 1311 aa21.25■□□□□ 0.99
NEDD4-207ENST00000508075 TECPR2O15040 1411 aa21.24■□□□□ 0.99
NEDD4-207ENST00000508075 C14orf93Q9H972 538 aaKnown RBP21.24■□□□□ 0.99
NEDD4-207ENST00000508075 LAMC1P11047 1609 aa21.23■□□□□ 0.99
NEDD4-207ENST00000508075 FMN2Q9NZ56 1722 aa21.23■□□□□ 0.99
NEDD4-207ENST00000508075 ABCC11Q96J66 1382 aa21.23■□□□□ 0.99
NEDD4-207ENST00000508075 MYOM2P54296 1465 aa21.22■□□□□ 0.99
NEDD4-207ENST00000508075 NRXN1Q9ULB1 1477 aa21.22■□□□□ 0.99
NEDD4-207ENST00000508075 FOXO3O43524 673 aa21.22■□□□□ 0.99
NEDD4-207ENST00000508075 SOS2Q07890 1332 aaPredicted RBP21.22■□□□□ 0.99
NEDD4-207ENST00000508075 PLEKHG5O94827 1062 aa21.2■□□□□ 0.98
NEDD4-207ENST00000508075 ZNF772Q68DY9 489 aaPredicted RBP21.2■□□□□ 0.98
NEDD4-207ENST00000508075 DCAF11Q8TEB1 546 aa21.19■□□□□ 0.98
NEDD4-207ENST00000508075 PRAM1Q96QH2 718 aa21.18■□□□□ 0.98
NEDD4-207ENST00000508075 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
NEDD4-207ENST00000508075 PXDNQ92626 1479 aa21.17■□□□□ 0.98
NEDD4-207ENST00000508075 TRAK1Q9UPV9 953 aa21.16■□□□□ 0.98
NEDD4-207ENST00000508075 ACIN1Q9UKV3 1341 aaKnown RBP21.15■□□□□ 0.98
NEDD4-207ENST00000508075 NGLY1Q96IV0 654 aa21.15■□□□□ 0.98
NEDD4-207ENST00000508075 RXRBP28702 533 aa21.14■□□□□ 0.97
NEDD4-207ENST00000508075 HIRIP3Q9BW71 556 aaPredicted RBP21.14■□□□□ 0.97
NEDD4-207ENST00000508075 ADGRB1O14514 1584 aa21.14■□□□□ 0.97
NEDD4-207ENST00000508075 NPHP3Q7Z494 1330 aa21.13■□□□□ 0.97
NEDD4-207ENST00000508075 COL22A1Q8NFW1 1626 aaPredicted RBP21.12■□□□□ 0.97
NEDD4-207ENST00000508075 QTRT2Q9H974 415 aaKnown RBP21.12■□□□□ 0.97
NEDD4-207ENST00000508075 POGKQ9P215 609 aa21.12■□□□□ 0.97
NEDD4-207ENST00000508075 MINK1Q8N4C8 1332 aaPredicted RBP21.11■□□□□ 0.97
NEDD4-207ENST00000508075 USP32Q8NFA0 1604 aa21.11■□□□□ 0.97
NEDD4-207ENST00000508075 PMFBP1Q8TBY8 1022 aa21.09■□□□□ 0.97
NEDD4-207ENST00000508075 MARF1Q9Y4F3 1742 aaKnown RBP21.09■□□□□ 0.97
NEDD4-207ENST00000508075 KIF1AQ12756 1690 aa21.09■□□□□ 0.97
NEDD4-207ENST00000508075 KRT28Q7Z3Y7 464 aa21.08■□□□□ 0.97
NEDD4-207ENST00000508075 RGS12O14924 1447 aa21.07■□□□□ 0.96
NEDD4-207ENST00000508075 SIRT1Q96EB6 747 aa21.07■□□□□ 0.96
NEDD4-207ENST00000508075 USP21Q9UK80 565 aa21.07■□□□□ 0.96
NEDD4-207ENST00000508075 PHF8Q9UPP1 1060 aa21.07■□□□□ 0.96
NEDD4-207ENST00000508075 DLC1Q96QB1 1528 aa21.07■□□□□ 0.96
NEDD4-207ENST00000508075 HRCP23327 699 aa21.06■□□□□ 0.96
NEDD4-207ENST00000508075 CABLES1Q8TDN4 633 aa21.06■□□□□ 0.96
NEDD4-207ENST00000508075 ARHGEF28Q8N1W1 1705 aaKnown RBP21.05■□□□□ 0.96
NEDD4-207ENST00000508075 LMOD2Q6P5Q4 547 aa21.04■□□□□ 0.96
NEDD4-207ENST00000508075 SPATA31A3Q5VYP0 1347 aa21.04■□□□□ 0.96
NEDD4-207ENST00000508075 UPF1Q92900 1129 aaKnown RBP eCLIP21.03■□□□□ 0.96
NEDD4-207ENST00000508075 PRR36Q9H6K5 1346 aa21.03■□□□□ 0.96
NEDD4-207ENST00000508075 RBM6P78332 1123 aaKnown RBP21.02■□□□□ 0.96
NEDD4-207ENST00000508075 ADGRB2O60241 1585 aa21.01■□□□□ 0.95
NEDD4-207ENST00000508075 PSME1Q06323 249 aa20.99■□□□□ 0.95
NEDD4-207ENST00000508075 NBPF1Q3BBV0 1214 aa20.99■□□□□ 0.95
NEDD4-207ENST00000508075 ABCA3Q99758 1704 aa20.98■□□□□ 0.95
NEDD4-207ENST00000508075 FNBP4Q8N3X1 1017 aaPredicted RBP20.98■□□□□ 0.95
NEDD4-207ENST00000508075 CDK12Q9NYV4 1490 aaPredicted RBP20.98■□□□□ 0.95
NEDD4-207ENST00000508075 TNS3Q68CZ2 1445 aa20.97■□□□□ 0.95
NEDD4-207ENST00000508075 BCL9LQ86UU0 1499 aa20.97■□□□□ 0.95
NEDD4-207ENST00000508075 HAP1P54257 671 aaPredicted RBP20.97■□□□□ 0.95
NEDD4-207ENST00000508075 SIN3AQ96ST3 1273 aa20.97■□□□□ 0.95
NEDD4-207ENST00000508075 TRPC5Q9UL62 973 aaPredicted RBP20.97■□□□□ 0.95
NEDD4-207ENST00000508075 ATRNO75882 1429 aa20.96■□□□□ 0.95
NEDD4-207ENST00000508075 TRPM3Q9HCF6 1732 aaPredicted RBP20.95■□□□□ 0.94
NEDD4-207ENST00000508075 WASLO00401 505 aaPredicted RBP20.95■□□□□ 0.94
NEDD4-207ENST00000508075 TULP4Q9NRJ4 1543 aa20.94■□□□□ 0.94
NEDD4-207ENST00000508075 ANKARQ7Z5J8 1434 aa20.94■□□□□ 0.94
NEDD4-207ENST00000508075 PLCH1Q4KWH8 1693 aa20.93■□□□□ 0.94
NEDD4-207ENST00000508075 NEUROD1Q13562 356 aa20.92■□□□□ 0.94
NEDD4-207ENST00000508075 KIAA1210Q9ULL0 1709 aa20.9■□□□□ 0.94
NEDD4-207ENST00000508075 ALS2Q96Q42 1657 aa20.9■□□□□ 0.94
NEDD4-207ENST00000508075 GLI3P10071 1580 aa20.9■□□□□ 0.94
NEDD4-207ENST00000508075 SBNO1A3KN83 1393 aa20.9■□□□□ 0.94
NEDD4-207ENST00000508075 PAK3O75914 559 aaPredicted RBP20.89■□□□□ 0.93
NEDD4-207ENST00000508075 NGDNQ8NEJ9 315 aaKnown RBP20.89■□□□□ 0.93
NEDD4-207ENST00000508075 NUDT16Q96DE0 195 aaKnown RBP20.89■□□□□ 0.93
NEDD4-207ENST00000508075 CDK19Q9BWU1 502 aa20.89■□□□□ 0.93
NEDD4-207ENST00000508075 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.89■□□□□ 0.93
NEDD4-207ENST00000508075 SLIT2O94813 1529 aa20.88■□□□□ 0.93
NEDD4-207ENST00000508075 ATP7BP35670 1465 aa20.88■□□□□ 0.93
NEDD4-207ENST00000508075 L3MBTL2Q969R5 705 aa20.88■□□□□ 0.93
NEDD4-207ENST00000508075 GJD4Q96KN9 370 aaPredicted RBP20.88■□□□□ 0.93
NEDD4-207ENST00000508075 BRWD3Q6RI45 1802 aa20.88■□□□□ 0.93
NEDD4-207ENST00000508075 ITSN1Q15811 1721 aa20.87■□□□□ 0.93
NEDD4-207ENST00000508075 NUTM2GQ5VZR2 741 aa20.87■□□□□ 0.93
NEDD4-207ENST00000508075 STAC3Q96MF2 364 aa20.87■□□□□ 0.93
NEDD4-207ENST00000508075 UNC5CLQ8IV45 518 aa20.86■□□□□ 0.93
NEDD4-207ENST00000508075 RALGAPBQ86X10 1494 aa20.86■□□□□ 0.93
NEDD4-207ENST00000508075 GPRASP1Q5JY77 1395 aa20.85■□□□□ 0.93
NEDD4-207ENST00000508075 FAM83GA6ND36 823 aa20.85■□□□□ 0.93
NEDD4-207ENST00000508075 CCDC9Q9Y3X0 531 aaKnown RBP20.85■□□□□ 0.93
NEDD4-207ENST00000508075 ARHGEF10O15013 1369 aa20.85■□□□□ 0.93
NEDD4-207ENST00000508075 CRYBG1Q9Y4K1 1723 aa20.84■□□□□ 0.93
NEDD4-207ENST00000508075 EIF3AQ14152 1382 aaKnown RBP20.84■□□□□ 0.93
NEDD4-207ENST00000508075 TOPAZ1Q8N9V7 1692 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms