RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 CADPS2Q86UW7 1296 aa23.61■■□□□ 1.37
DDR1-261ENST00000507901 TONSLQ96HA7 1378 aa23.61■■□□□ 1.37
DDR1-261ENST00000507901 NBPF8Q3BBV2 869 aa23.6■■□□□ 1.37
DDR1-261ENST00000507901 ADGRB2O60241 1585 aa23.59■■□□□ 1.37
DDR1-261ENST00000507901 C14orf37Q86TY3 774 aa23.58■■□□□ 1.37
DDR1-261ENST00000507901 SLAIN2Q9P270 581 aa23.58■■□□□ 1.37
DDR1-261ENST00000507901 GPRASP1Q5JY77 1395 aa23.56■■□□□ 1.36
DDR1-261ENST00000507901 ATF3P18847 181 aa23.56■■□□□ 1.36
DDR1-261ENST00000507901 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
DDR1-261ENST00000507901 PRAM1Q96QH2 718 aa23.55■■□□□ 1.36
DDR1-261ENST00000507901 TRAK1Q9UPV9 953 aa23.55■■□□□ 1.36
DDR1-261ENST00000507901 RALGAPBQ86X10 1494 aa23.54■■□□□ 1.36
DDR1-261ENST00000507901 C1orf167Q5SNV9 1468 aa23.53■■□□□ 1.36
DDR1-261ENST00000507901 TIMELESSQ9UNS1 1208 aa23.52■■□□□ 1.36
DDR1-261ENST00000507901 AHDC1Q5TGY3 1603 aaPredicted RBP23.51■■□□□ 1.35
DDR1-261ENST00000507901 ILDR2Q71H61 639 aa23.5■■□□□ 1.35
DDR1-261ENST00000507901 NHSL1Q5SYE7 1610 aa23.5■■□□□ 1.35
DDR1-261ENST00000507901 BRINP3Q76B58 766 aa23.48■■□□□ 1.35
DDR1-261ENST00000507901 CCER1Q8TC90 406 aaPredicted RBP23.48■■□□□ 1.35
DDR1-261ENST00000507901 ROCK2O75116 1388 aaKnown RBP23.47■■□□□ 1.35
DDR1-261ENST00000507901 COL16A1Q07092 1604 aaPredicted RBP23.47■■□□□ 1.35
DDR1-261ENST00000507901 USP32Q8NFA0 1604 aa23.47■■□□□ 1.35
DDR1-261ENST00000507901 POGKQ9P215 609 aa23.46■■□□□ 1.35
DDR1-261ENST00000507901 PHLPP1O60346 1717 aa23.45■■□□□ 1.34
DDR1-261ENST00000507901 RGPD8O14715 1765 aaPredicted RBP23.45■■□□□ 1.34
DDR1-261ENST00000507901 QRICH2Q9H0J4 1663 aa23.44■■□□□ 1.34
DDR1-261ENST00000507901 MED1Q15648 1581 aaPredicted RBP23.44■■□□□ 1.34
DDR1-261ENST00000507901 SAFB2Q14151 953 aaKnown RBP eCLIP23.44■■□□□ 1.34
DDR1-261ENST00000507901 ANKARQ7Z5J8 1434 aa23.41■■□□□ 1.34
DDR1-261ENST00000507901 TULP4Q9NRJ4 1543 aa23.4■■□□□ 1.34
DDR1-261ENST00000507901 MINK1Q8N4C8 1332 aaPredicted RBP23.39■■□□□ 1.34
DDR1-261ENST00000507901 ORAI2Q96SN7 254 aa23.39■■□□□ 1.33
DDR1-261ENST00000507901 PHF23Q9BUL5 403 aaPredicted RBP23.39■■□□□ 1.33
DDR1-261ENST00000507901 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
DDR1-261ENST00000507901 CENPJQ9HC77 1338 aaPredicted RBP23.38■■□□□ 1.33
DDR1-261ENST00000507901 WASLO00401 505 aaPredicted RBP23.37■■□□□ 1.33
DDR1-261ENST00000507901 HIRIP3Q9BW71 556 aaPredicted RBP23.37■■□□□ 1.33
DDR1-261ENST00000507901 ATP7BP35670 1465 aa23.36■■□□□ 1.33
DDR1-261ENST00000507901 PRR36Q9H6K5 1346 aa23.35■■□□□ 1.33
DDR1-261ENST00000507901 TOPAZ1Q8N9V7 1692 aa23.35■■□□□ 1.33
DDR1-261ENST00000507901 SOCS7O14512 581 aa23.35■■□□□ 1.33
DDR1-261ENST00000507901 CARD11Q9BXL7 1154 aa23.34■■□□□ 1.33
DDR1-261ENST00000507901 EIF3AQ14152 1382 aaKnown RBP23.34■■□□□ 1.33
DDR1-261ENST00000507901 SBNO2Q9Y2G9 1366 aa23.34■■□□□ 1.33
DDR1-261ENST00000507901 PXDNQ92626 1479 aa23.33■■□□□ 1.33
DDR1-261ENST00000507901 SHPRHQ149N8 1683 aa23.32■■□□□ 1.32
DDR1-261ENST00000507901 NUTM2FA1L443 756 aa23.32■■□□□ 1.32
DDR1-261ENST00000507901 ITSN1Q15811 1721 aa23.32■■□□□ 1.32
DDR1-261ENST00000507901 SOS2Q07890 1332 aaPredicted RBP23.32■■□□□ 1.32
DDR1-261ENST00000507901 JCADQ9P266 1359 aa23.31■■□□□ 1.32
DDR1-261ENST00000507901 ESCO1Q5FWF5 840 aa23.31■■□□□ 1.32
DDR1-261ENST00000507901 DDX17Q92841 729 aaKnown RBP23.31■■□□□ 1.32
DDR1-261ENST00000507901 CDK19Q9BWU1 502 aa23.29■■□□□ 1.32
DDR1-261ENST00000507901 PHF8Q9UPP1 1060 aa23.26■■□□□ 1.31
DDR1-261ENST00000507901 NPHP3Q7Z494 1330 aa23.26■■□□□ 1.31
DDR1-261ENST00000507901 NUDT16Q96DE0 195 aaKnown RBP23.24■■□□□ 1.31
DDR1-261ENST00000507901 TRPM3Q9HCF6 1732 aaPredicted RBP23.24■■□□□ 1.31
DDR1-261ENST00000507901 COL22A1Q8NFW1 1626 aaPredicted RBP23.23■■□□□ 1.31
DDR1-261ENST00000507901 FOXO3O43524 673 aa23.23■■□□□ 1.31
DDR1-261ENST00000507901 TESK2Q96S53 571 aa23.23■■□□□ 1.31
DDR1-261ENST00000507901 SPATA31A6Q5VVP1 1343 aa23.22■■□□□ 1.31
DDR1-261ENST00000507901 USP47Q96K76 1375 aa23.22■■□□□ 1.31
DDR1-261ENST00000507901 RGS17Q9UGC6 210 aaPredicted RBP23.21■■□□□ 1.31
DDR1-261ENST00000507901 POLR3AO14802 1390 aaPredicted RBP23.21■■□□□ 1.31
DDR1-261ENST00000507901 PNPLA6Q8IY17 1366 aa23.21■■□□□ 1.31
DDR1-261ENST00000507901 EVC2Q86UK5 1308 aa23.2■■□□□ 1.3
DDR1-261ENST00000507901 LRRC59Q96AG4 307 aaKnown RBP23.2■■□□□ 1.3
DDR1-261ENST00000507901 PLEKHG3A1L390 1219 aa23.19■■□□□ 1.3
DDR1-261ENST00000507901 CABP2Q9NPB3 220 aa23.19■■□□□ 1.3
DDR1-261ENST00000507901 LRP6O75581 1613 aa23.19■■□□□ 1.3
DDR1-261ENST00000507901 ST20-MTHFSA0A0A6YYL1 179 aa23.18■■□□□ 1.3
DDR1-261ENST00000507901 CCDC61Q9Y6R9 512 aa23.18■■□□□ 1.3
DDR1-261ENST00000507901 ALS2Q96Q42 1657 aa23.17■■□□□ 1.3
DDR1-261ENST00000507901 PMFBP1Q8TBY8 1022 aa23.17■■□□□ 1.3
DDR1-261ENST00000507901 SBNO1A3KN83 1393 aa23.16■■□□□ 1.3
DDR1-261ENST00000507901 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
DDR1-261ENST00000507901 SRPK2P78362 688 aaKnown RBP23.15■■□□□ 1.3
DDR1-261ENST00000507901 XPCQ01831 940 aaPredicted RBP23.15■■□□□ 1.3
DDR1-261ENST00000507901 SPATA31A3Q5VYP0 1347 aa23.14■■□□□ 1.3
DDR1-261ENST00000507901 KRT28Q7Z3Y7 464 aa23.14■■□□□ 1.29
DDR1-261ENST00000507901 TNS3Q68CZ2 1445 aa23.14■■□□□ 1.29
DDR1-261ENST00000507901 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
DDR1-261ENST00000507901 AKAP12Q02952 1782 aa23.13■■□□□ 1.29
DDR1-261ENST00000507901 ATAD2Q6PL18 1390 aa23.12■■□□□ 1.29
DDR1-261ENST00000507901 ACEP12821 1306 aa23.11■■□□□ 1.29
DDR1-261ENST00000507901 MEX3CQ5U5Q3 659 aaKnown RBP23.11■■□□□ 1.29
DDR1-261ENST00000507901 POTEAQ6S8J7 498 aa23.1■■□□□ 1.29
DDR1-261ENST00000507901 ABCA3Q99758 1704 aa23.1■■□□□ 1.29
DDR1-261ENST00000507901 CRYBG1Q9Y4K1 1723 aa23.1■■□□□ 1.29
DDR1-261ENST00000507901 PSME1Q06323 249 aa23.09■■□□□ 1.29
DDR1-261ENST00000507901 CD163L1Q9NR16 1453 aa23.09■■□□□ 1.29
DDR1-261ENST00000507901 NGDNQ8NEJ9 315 aaKnown RBP23.08■■□□□ 1.29
DDR1-261ENST00000507901 CABP1Q9NZU7 370 aa23.08■■□□□ 1.29
DDR1-261ENST00000507901 CPSF1Q10570 1443 aaKnown RBP23.08■■□□□ 1.28
DDR1-261ENST00000507901 SSH2Q76I76 1423 aa23.08■■□□□ 1.28
DDR1-261ENST00000507901 NRKQ7Z2Y5 1582 aa23.07■■□□□ 1.28
DDR1-261ENST00000507901 NUTM2BA6NNL0 878 aaPredicted RBP23.07■■□□□ 1.28
DDR1-261ENST00000507901 NUTM2EB1AL46 878 aaPredicted RBP23.07■■□□□ 1.28
DDR1-261ENST00000507901 SLC24A1O60721 1099 aa23.07■■□□□ 1.28
DDR1-261ENST00000507901 NUTM2AQ8IVF1 878 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms