RNA–Protein interactions for RNA: ENST00000507760.5

ZCCHC4-204, Transcript of zinc finger CCHC-type containing 4, humanhuman

TSL 1 (best)

Gene ZCCHC4, Length 2,045 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4-204ENST00000507760 POGKQ9P215 609 aa28.68■■■□□ 2.18
ZCCHC4-204ENST00000507760 ANKRD36BQ8N2N9 1353 aa28.67■■■□□ 2.18
ZCCHC4-204ENST00000507760 TSHZ2Q9NRE2 1034 aa28.66■■■□□ 2.18
ZCCHC4-204ENST00000507760 USP32Q8NFA0 1604 aa28.66■■■□□ 2.18
ZCCHC4-204ENST00000507760 CDCA7LQ96GN5 454 aa28.65■■■□□ 2.18
ZCCHC4-204ENST00000507760 MORC1Q86VD1 984 aa28.65■■■□□ 2.18
ZCCHC4-204ENST00000507760 MINK1Q8N4C8 1332 aaPredicted RBP28.64■■■□□ 2.18
ZCCHC4-204ENST00000507760 SRPK2P78362 688 aaKnown RBP28.64■■■□□ 2.17
ZCCHC4-204ENST00000507760 CGNL1Q0VF96 1302 aa28.63■■■□□ 2.17
ZCCHC4-204ENST00000507760 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.62■■■□□ 2.17
ZCCHC4-204ENST00000507760 NINLQ9Y2I6 1382 aa28.62■■■□□ 2.17
ZCCHC4-204ENST00000507760 POLR3AO14802 1390 aaPredicted RBP28.61■■■□□ 2.17
ZCCHC4-204ENST00000507760 TNRQ92752 1358 aa28.61■■■□□ 2.17
ZCCHC4-204ENST00000507760 SETD1AO15047 1707 aaKnown RBP28.6■■■□□ 2.17
ZCCHC4-204ENST00000507760 RCAN3Q9UKA8 241 aa28.59■■■□□ 2.17
ZCCHC4-204ENST00000507760 ATAD2Q6PL18 1390 aa28.58■■■□□ 2.17
ZCCHC4-204ENST00000507760 DLC1Q96QB1 1528 aa28.57■■■□□ 2.16
ZCCHC4-204ENST00000507760 PLEKHH1Q9ULM0 1364 aa28.56■■■□□ 2.16
ZCCHC4-204ENST00000507760 HDGFP51858 240 aaKnown RBP28.56■■■□□ 2.16
ZCCHC4-204ENST00000507760 NSD2O96028 1365 aa28.56■■■□□ 2.16
ZCCHC4-204ENST00000507760 NRXN3Q9Y4C0 1643 aa28.55■■■□□ 2.16
ZCCHC4-204ENST00000507760 TNNT2P45379 298 aaPredicted RBP28.55■■■□□ 2.16
ZCCHC4-204ENST00000507760 ABCC11Q96J66 1382 aa28.55■■■□□ 2.16
ZCCHC4-204ENST00000507760 CDK19Q9BWU1 502 aa28.55■■■□□ 2.16
ZCCHC4-204ENST00000507760 A0A1W2PP64 1363 aa28.54■■■□□ 2.16
ZCCHC4-204ENST00000507760 ZNF521Q96K83 1311 aa28.54■■■□□ 2.16
ZCCHC4-204ENST00000507760 B4GALNT3Q6L9W6 998 aa28.53■■■□□ 2.16
ZCCHC4-204ENST00000507760 WAPLQ7Z5K2 1190 aa28.53■■■□□ 2.16
ZCCHC4-204ENST00000507760 CCDC146Q8IYE0 955 aa28.53■■■□□ 2.16
ZCCHC4-204ENST00000507760 RRP1P56182 461 aaKnown RBP28.52■■■□□ 2.16
ZCCHC4-204ENST00000507760 TERF2IPQ9NYB0 399 aa28.5■■■□□ 2.15
ZCCHC4-204ENST00000507760 METP08581 1390 aa28.5■■■□□ 2.15
ZCCHC4-204ENST00000507760 TMEM2Q9UHN6 1383 aa28.49■■■□□ 2.15
ZCCHC4-204ENST00000507760 UBR1Q8IWV7 1749 aa28.49■■■□□ 2.15
ZCCHC4-204ENST00000507760 CD163L1Q9NR16 1453 aa28.49■■■□□ 2.15
ZCCHC4-204ENST00000507760 APAF1O14727 1248 aa28.48■■■□□ 2.15
ZCCHC4-204ENST00000507760 MTHFSP49914 203 aa28.48■■■□□ 2.15
ZCCHC4-204ENST00000507760 GOLGA2Q08379 1002 aa28.45■■■□□ 2.15
ZCCHC4-204ENST00000507760 SHPRHQ149N8 1683 aa28.45■■■□□ 2.14
ZCCHC4-204ENST00000507760 CEBPAP49715 358 aaPredicted RBP28.44■■■□□ 2.14
ZCCHC4-204ENST00000507760 CABP1Q9NZU7 370 aa28.44■■■□□ 2.14
ZCCHC4-204ENST00000507760 DUSP27Q5VZP5 1158 aa28.43■■■□□ 2.14
ZCCHC4-204ENST00000507760 HDGFL2Q7Z4V5 671 aaPredicted RBP28.42■■■□□ 2.14
ZCCHC4-204ENST00000507760 NGEFQ8N5V2 710 aa28.42■■■□□ 2.14
ZCCHC4-204ENST00000507760 NLRP1Q9C000 1473 aa28.42■■■□□ 2.14
ZCCHC4-204ENST00000507760 TRHP20396 242 aaPredicted RBP28.42■■■□□ 2.14
ZCCHC4-204ENST00000507760 SIRT1Q96EB6 747 aa28.42■■■□□ 2.14
ZCCHC4-204ENST00000507760 CFAP53Q96M91 514 aa28.42■■■□□ 2.14
ZCCHC4-204ENST00000507760 FYB1O15117 783 aa28.41■■■□□ 2.14
ZCCHC4-204ENST00000507760 TXNDC2Q86VQ3 553 aa28.41■■■□□ 2.14
ZCCHC4-204ENST00000507760 GGNBP2Q9H3C7 697 aa28.4■■■□□ 2.14
ZCCHC4-204ENST00000507760 SLFN5Q08AF3 891 aa28.4■■■□□ 2.14
ZCCHC4-204ENST00000507760 TECPR2O15040 1411 aa28.38■■■□□ 2.13
ZCCHC4-204ENST00000507760 MED14O60244 1454 aa28.38■■■□□ 2.13
ZCCHC4-204ENST00000507760 TRMT2AQ8IZ69 625 aaKnown RBP28.38■■■□□ 2.13
ZCCHC4-204ENST00000507760 FAM135BQ49AJ0 1406 aa28.38■■■□□ 2.13
ZCCHC4-204ENST00000507760 WASLO00401 505 aaPredicted RBP28.37■■■□□ 2.13
ZCCHC4-204ENST00000507760 LTKP29376 864 aa28.36■■■□□ 2.13
ZCCHC4-204ENST00000507760 KNDC1Q76NI1 1749 aa28.36■■■□□ 2.13
ZCCHC4-204ENST00000507760 CCDC136Q96JN2 1154 aa28.36■■■□□ 2.13
ZCCHC4-204ENST00000507760 C3P01024 1663 aa28.35■■■□□ 2.13
ZCCHC4-204ENST00000507760 ADAMTS13Q76LX8 1427 aa28.34■■■□□ 2.13
ZCCHC4-204ENST00000507760 RUNDC1Q96C34 613 aa28.34■■■□□ 2.13
ZCCHC4-204ENST00000507760 ANKRD26Q9UPS8 1709 aa28.34■■■□□ 2.13
ZCCHC4-204ENST00000507760 ATP7BP35670 1465 aa28.33■■■□□ 2.13
ZCCHC4-204ENST00000507760 PLEKHG1Q9ULL1 1385 aa28.33■■■□□ 2.13
ZCCHC4-204ENST00000507760 SPINK5Q9NQ38 1064 aaPredicted RBP28.33■■■□□ 2.13
ZCCHC4-204ENST00000507760 EXOC6Q8TAG9 804 aa28.32■■■□□ 2.12
ZCCHC4-204ENST00000507760 CPS1P31327 1500 aa28.32■■■□□ 2.12
ZCCHC4-204ENST00000507760 FER1L4A9Z1Z3 1794 aa28.3■■■□□ 2.12
ZCCHC4-204ENST00000507760 PLIN1O60240 522 aa28.3■■■□□ 2.12
ZCCHC4-204ENST00000507760 E9PSI1 815 aa28.29■■■□□ 2.12
ZCCHC4-204ENST00000507760 WWC1Q8IX03 1113 aa28.29■■■□□ 2.12
ZCCHC4-204ENST00000507760 TCP11L2Q8N4U5 519 aa28.27■■■□□ 2.12
ZCCHC4-204ENST00000507760 DMRT2Q9Y5R5 561 aa28.27■■■□□ 2.12
ZCCHC4-204ENST00000507760 EID1Q9Y6B2 187 aa28.27■■■□□ 2.12
ZCCHC4-204ENST00000507760 PLPPR3Q6T4P5 718 aa28.26■■■□□ 2.12
ZCCHC4-204ENST00000507760 RBM19Q9Y4C8 960 aaKnown RBP28.26■■■□□ 2.12
ZCCHC4-204ENST00000507760 PPIP5K1Q6PFW1 1433 aa28.26■■■□□ 2.12
ZCCHC4-204ENST00000507760 KIF20BQ96Q89 1820 aa28.26■■■□□ 2.11
ZCCHC4-204ENST00000507760 CPSF1Q10570 1443 aaKnown RBP28.26■■■□□ 2.11
ZCCHC4-204ENST00000507760 NUDT16Q96DE0 195 aaKnown RBP28.26■■■□□ 2.11
ZCCHC4-204ENST00000507760 ROBO2Q9HCK4 1378 aa28.26■■■□□ 2.11
ZCCHC4-204ENST00000507760 IQSEC2Q5JU85 1478 aa28.25■■■□□ 2.11
ZCCHC4-204ENST00000507760 U2AF1L5P0DN76 240 aaPredicted RBP28.25■■■□□ 2.11
ZCCHC4-204ENST00000507760 U2AF1Q01081 240 aaKnown RBP eCLIP28.25■■■□□ 2.11
ZCCHC4-204ENST00000507760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.25■■■□□ 2.11
ZCCHC4-204ENST00000507760 SLIT1O75093 1534 aa28.24■■■□□ 2.11
ZCCHC4-204ENST00000507760 NKTRP30414 1462 aaKnown RBP28.24■■■□□ 2.11
ZCCHC4-204ENST00000507760 ARHGAP23Q9P227 1491 aa28.24■■■□□ 2.11
ZCCHC4-204ENST00000507760 CCDC61Q9Y6R9 512 aa28.23■■■□□ 2.11
ZCCHC4-204ENST00000507760 PHF23Q9BUL5 403 aaPredicted RBP28.23■■■□□ 2.11
ZCCHC4-204ENST00000507760 COL3A1P02461 1466 aaPredicted RBP28.23■■■□□ 2.11
ZCCHC4-204ENST00000507760 NEUROD2Q15784 382 aa28.21■■■□□ 2.11
ZCCHC4-204ENST00000507760 RRP7AQ9Y3A4 280 aaKnown RBP28.21■■■□□ 2.11
ZCCHC4-204ENST00000507760 SLC26A8Q96RN1 970 aa28.21■■■□□ 2.11
ZCCHC4-204ENST00000507760 THEMISQ8N1K5 641 aaPredicted RBP28.2■■■□□ 2.11
ZCCHC4-204ENST00000507760 NCKAP5LQ9HCH0 1330 aa28.2■■■□□ 2.1
ZCCHC4-204ENST00000507760 EDC4Q6P2E9 1401 aaKnown RBP28.2■■■□□ 2.1
ZCCHC4-204ENST00000507760 NCBP3Q53F19 620 aaKnown RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms