RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
LINC01088-203ENST00000507476 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
LINC01088-203ENST00000507476 GUCA2AQ02747 115 aa12.29□□□□□ -0.44
LINC01088-203ENST00000507476 DGAT1O75907 488 aa12.28□□□□□ -0.44
LINC01088-203ENST00000507476 MMP16P51512 607 aa12.28□□□□□ -0.44
LINC01088-203ENST00000507476 FOXC1Q12948 553 aa12.28□□□□□ -0.44
LINC01088-203ENST00000507476 PKDCCQ504Y2 493 aa12.28□□□□□ -0.44
LINC01088-203ENST00000507476 KRI1Q8N9T8 703 aaKnown RBP12.28□□□□□ -0.44
LINC01088-203ENST00000507476 USB1Q9BQ65 265 aaKnown RBP12.28□□□□□ -0.44
LINC01088-203ENST00000507476 MYT1Q01538 1121 aa12.27□□□□□ -0.45
LINC01088-203ENST00000507476 FAM187AA6NFU0 413 aa12.25□□□□□ -0.45
LINC01088-203ENST00000507476 DXOO77932 396 aaKnown RBP12.25□□□□□ -0.45
LINC01088-203ENST00000507476 CD2BP2O95400 341 aaKnown RBP12.25□□□□□ -0.45
LINC01088-203ENST00000507476 SSTR3P32745 418 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-203ENST00000507476 AMHR2Q16671 573 aa12.22□□□□□ -0.45
LINC01088-203ENST00000507476 NUTM1Q86Y26 1132 aa12.22□□□□□ -0.45
LINC01088-203ENST00000507476 SYMPKQ92797 1274 aaKnown RBP12.22□□□□□ -0.45
LINC01088-203ENST00000507476 ZBTB24O43167 697 aaPredicted RBP12.2□□□□□ -0.46
LINC01088-203ENST00000507476 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
LINC01088-203ENST00000507476 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
LINC01088-203ENST00000507476 TOR4AQ9NXH8 423 aa12.2□□□□□ -0.46
LINC01088-203ENST00000507476 PCDHGC3Q9UN70 934 aa12.19□□□□□ -0.46
LINC01088-203ENST00000507476 TRIM32Q13049 653 aa12.18□□□□□ -0.46
LINC01088-203ENST00000507476 SPIRE2Q8WWL2 714 aa12.18□□□□□ -0.46
LINC01088-203ENST00000507476 GIGYF2Q6Y7W6 1299 aaKnown RBP12.17□□□□□ -0.46
LINC01088-203ENST00000507476 FDX1P10109 184 aa12.16□□□□□ -0.46
LINC01088-203ENST00000507476 ST8SIA5O15466 376 aa12.15□□□□□ -0.46
LINC01088-203ENST00000507476 JUNDP17535 347 aa12.15□□□□□ -0.46
LINC01088-203ENST00000507476 RETREG3Q86VR2 466 aa12.15□□□□□ -0.46
LINC01088-203ENST00000507476 CYP4X1Q8N118 509 aa12.14□□□□□ -0.47
LINC01088-203ENST00000507476 CCDC24Q8N4L8 307 aa12.14□□□□□ -0.47
LINC01088-203ENST00000507476 AAASQ9NRG9 546 aa12.14□□□□□ -0.47
LINC01088-203ENST00000507476 POTECB2RU33 542 aa12.13□□□□□ -0.47
LINC01088-203ENST00000507476 WNT7AO00755 349 aa12.13□□□□□ -0.47
LINC01088-203ENST00000507476 NDUFV2P19404 249 aa12.13□□□□□ -0.47
LINC01088-203ENST00000507476 MOXD2PA6NHM9 499 aa12.12□□□□□ -0.47
LINC01088-203ENST00000507476 TRIM66O15016 1216 aa12.12□□□□□ -0.47
LINC01088-203ENST00000507476 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
LINC01088-203ENST00000507476 C6orf229H3BNL8 230 aa12.1□□□□□ -0.47
LINC01088-203ENST00000507476 AVPP01185 164 aa12.1□□□□□ -0.47
LINC01088-203ENST00000507476 BEGAINQ9BUH8 593 aa12.1□□□□□ -0.47
LINC01088-203ENST00000507476 SKOR1P84550 965 aa12.09□□□□□ -0.47
LINC01088-203ENST00000507476 CRIPAKQ8N1N5 446 aa12.09□□□□□ -0.47
LINC01088-203ENST00000507476 MRGPRX2Q96LB1 330 aa12.09□□□□□ -0.47
LINC01088-203ENST00000507476 TTC24A2A3L6 582 aaPredicted RBP12.08□□□□□ -0.48
LINC01088-203ENST00000507476 PTCRAQ6ISU1 281 aaPredicted RBP12.08□□□□□ -0.48
LINC01088-203ENST00000507476 AK7Q96M32 723 aa12.08□□□□□ -0.48
LINC01088-203ENST00000507476 MS4A1P11836 297 aa12.07□□□□□ -0.48
LINC01088-203ENST00000507476 NUDT12Q9BQG2 462 aa12.07□□□□□ -0.48
LINC01088-203ENST00000507476 SMPD1P17405 629 aa12.06□□□□□ -0.48
LINC01088-203ENST00000507476 SNIP1Q8TAD8 396 aaKnown RBP12.06□□□□□ -0.48
LINC01088-203ENST00000507476 DACH1Q9UI36 760 aa12.06□□□□□ -0.48
LINC01088-203ENST00000507476 ZNF775Q96BV0 537 aaPredicted RBP12.05□□□□□ -0.48
LINC01088-203ENST00000507476 TBC1D2Q9BYX2 928 aa12.05□□□□□ -0.48
LINC01088-203ENST00000507476 J3QL48 77 aa12.04□□□□□ -0.48
LINC01088-203ENST00000507476 WNT7BP56706 349 aa12.04□□□□□ -0.48
LINC01088-203ENST00000507476 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
LINC01088-203ENST00000507476 PRR7Q8TB68 274 aa12.03□□□□□ -0.48
LINC01088-203ENST00000507476 CCNYL3P0C7X3 344 aa12.02□□□□□ -0.49
LINC01088-203ENST00000507476 SMCPP49901 116 aaPredicted RBP12.02□□□□□ -0.49
LINC01088-203ENST00000507476 CTC1Q2NKJ3 1217 aa12.02□□□□□ -0.49
LINC01088-203ENST00000507476 RSBN1LQ6PCB5 846 aaPredicted RBP12.02□□□□□ -0.49
LINC01088-203ENST00000507476 AXIN1O15169 862 aa12.01□□□□□ -0.49
LINC01088-203ENST00000507476 MTMR2Q13614 643 aa12.01□□□□□ -0.49
LINC01088-203ENST00000507476 GJA5P36382 358 aa12□□□□□ -0.49
LINC01088-203ENST00000507476 PTPRNQ16849 979 aa12□□□□□ -0.49
LINC01088-203ENST00000507476 PCDHB15Q9Y5E8 787 aa12□□□□□ -0.49
LINC01088-203ENST00000507476 SPDYE5A6NIY4 337 aa11.98□□□□□ -0.49
LINC01088-203ENST00000507476 SPTLC1O15269 473 aa11.98□□□□□ -0.49
LINC01088-203ENST00000507476 PDE4DQ08499 809 aa11.98□□□□□ -0.49
LINC01088-203ENST00000507476 DIXDC1Q155Q3 683 aa11.98□□□□□ -0.49
LINC01088-203ENST00000507476 SLC24A3Q9HC58 644 aa11.98□□□□□ -0.49
LINC01088-203ENST00000507476 EVA1BQ9NVM1 165 aa11.98□□□□□ -0.49
LINC01088-203ENST00000507476 DESI1Q6ICB0 168 aa11.97□□□□□ -0.49
LINC01088-203ENST00000507476 HPS1Q92902 700 aa11.96□□□□□ -0.49
LINC01088-203ENST00000507476 SIAH2O43255 324 aa11.95□□□□□ -0.5
LINC01088-203ENST00000507476 SH3BP2P78314 561 aa11.95□□□□□ -0.5
LINC01088-203ENST00000507476 UNC93B1Q9H1C4 597 aa11.95□□□□□ -0.5
LINC01088-203ENST00000507476 GMPR2Q9P2T1 348 aaKnown RBP11.95□□□□□ -0.5
LINC01088-203ENST00000507476 CFAP99D6REC4 459 aa11.94□□□□□ -0.5
LINC01088-203ENST00000507476 KCNH2Q12809 1159 aa11.94□□□□□ -0.5
LINC01088-203ENST00000507476 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
LINC01088-203ENST00000507476 HRCP23327 699 aa11.93□□□□□ -0.5
LINC01088-203ENST00000507476 ALDH1A1P00352 501 aa11.92□□□□□ -0.5
LINC01088-203ENST00000507476 EHBP1Q8NDI1 1231 aa11.92□□□□□ -0.5
LINC01088-203ENST00000507476 CABLES1Q8TDN4 633 aa11.92□□□□□ -0.5
LINC01088-203ENST00000507476 LINC01559Q495D7 138 aa11.91□□□□□ -0.5
LINC01088-203ENST00000507476 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
LINC01088-203ENST00000507476 LYPD8Q6UX82 237 aa11.91□□□□□ -0.5
LINC01088-203ENST00000507476 BAP1Q92560 729 aa11.91□□□□□ -0.5
LINC01088-203ENST00000507476 ZBTB3Q9H5J0 574 aa11.91□□□□□ -0.5
LINC01088-203ENST00000507476 ATP13A2Q9NQ11 1180 aa11.9□□□□□ -0.5
LINC01088-203ENST00000507476 LIMD1Q9UGP4 676 aa11.9□□□□□ -0.5
LINC01088-203ENST00000507476 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
LINC01088-203ENST00000507476 PRPF38BQ5VTL8 546 aaKnown RBP11.89□□□□□ -0.51
LINC01088-203ENST00000507476 C11orf95C9JLR9 678 aaPredicted RBP11.88□□□□□ -0.51
LINC01088-203ENST00000507476 ZNF511Q8NB15 262 aa11.88□□□□□ -0.51
LINC01088-203ENST00000507476 QPCTQ16769 361 aa11.86□□□□□ -0.51
LINC01088-203ENST00000507476 F12P00748 615 aaPredicted RBP11.85□□□□□ -0.51
LINC01088-203ENST00000507476 CTHP32929 405 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms