RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 ADAMTS2O95450 1211 aa25.11■■□□□ 1.61
SNF8-205ENST00000507302 CDC42BPGQ6DT37 1551 aa25.1■■□□□ 1.61
SNF8-205ENST00000507302 RPGRIP1LQ68CZ1 1315 aa25.1■■□□□ 1.61
SNF8-205ENST00000507302 USP21Q9UK80 565 aa25.09■■□□□ 1.61
SNF8-205ENST00000507302 TRPC5Q9UL62 973 aaPredicted RBP25.09■■□□□ 1.61
SNF8-205ENST00000507302 PXDNQ92626 1479 aa25.08■■□□□ 1.6
SNF8-205ENST00000507302 RRBP1Q9P2E9 1410 aaKnown RBP25.06■■□□□ 1.6
SNF8-205ENST00000507302 BCL9LQ86UU0 1499 aa25.06■■□□□ 1.6
SNF8-205ENST00000507302 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.03■■□□□ 1.6
SNF8-205ENST00000507302 NPHP3Q7Z494 1330 aa25.01■■□□□ 1.59
SNF8-205ENST00000507302 TECPR2O15040 1411 aa25.01■■□□□ 1.59
SNF8-205ENST00000507302 CCDC125Q86Z20 511 aa24.98■■□□□ 1.59
SNF8-205ENST00000507302 KNDC1Q76NI1 1749 aa24.96■■□□□ 1.59
SNF8-205ENST00000507302 IFT172Q9UG01 1749 aa24.95■■□□□ 1.59
SNF8-205ENST00000507302 SLIT2O94813 1529 aa24.93■■□□□ 1.58
SNF8-205ENST00000507302 ESCO1Q5FWF5 840 aa24.93■■□□□ 1.58
SNF8-205ENST00000507302 GLI3P10071 1580 aa24.93■■□□□ 1.58
SNF8-205ENST00000507302 FMN2Q9NZ56 1722 aa24.92■■□□□ 1.58
SNF8-205ENST00000507302 FOXD1Q16676 465 aa24.92■■□□□ 1.58
SNF8-205ENST00000507302 GJD4Q96KN9 370 aaPredicted RBP24.92■■□□□ 1.58
SNF8-205ENST00000507302 LRPPRCP42704 1394 aaKnown RBP24.92■■□□□ 1.58
SNF8-205ENST00000507302 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
SNF8-205ENST00000507302 ZRANB1Q9UGI0 708 aa24.91■■□□□ 1.58
SNF8-205ENST00000507302 ABCC11Q96J66 1382 aa24.91■■□□□ 1.58
SNF8-205ENST00000507302 SPATA31E1Q6ZUB1 1445 aa24.9■■□□□ 1.58
SNF8-205ENST00000507302 FOXO3O43524 673 aa24.9■■□□□ 1.58
SNF8-205ENST00000507302 KIF1AQ12756 1690 aa24.9■■□□□ 1.58
SNF8-205ENST00000507302 ADGRF5Q8IZF2 1346 aa24.88■■□□□ 1.57
SNF8-205ENST00000507302 SLC4A1APQ9BWU0 796 aaKnown RBP24.88■■□□□ 1.57
SNF8-205ENST00000507302 USP32Q8NFA0 1604 aa24.87■■□□□ 1.57
SNF8-205ENST00000507302 RALGAPBQ86X10 1494 aa24.87■■□□□ 1.57
SNF8-205ENST00000507302 SPATA31A3Q5VYP0 1347 aa24.86■■□□□ 1.57
SNF8-205ENST00000507302 BRWD3Q6RI45 1802 aa24.86■■□□□ 1.57
SNF8-205ENST00000507302 UNC5CLQ8IV45 518 aa24.85■■□□□ 1.57
SNF8-205ENST00000507302 ANKRD30BQ9BXX2 1392 aa24.84■■□□□ 1.57
SNF8-205ENST00000507302 XPCQ01831 940 aaPredicted RBP24.84■■□□□ 1.57
SNF8-205ENST00000507302 WAPLQ7Z5K2 1190 aa24.84■■□□□ 1.57
SNF8-205ENST00000507302 PIK3C2GO75747 1445 aa24.84■■□□□ 1.57
SNF8-205ENST00000507302 BLMP54132 1417 aaPredicted RBP24.84■■□□□ 1.57
SNF8-205ENST00000507302 PLEKHH1Q9ULM0 1364 aa24.83■■□□□ 1.57
SNF8-205ENST00000507302 CCDC144AA2RUR9 1427 aa24.83■■□□□ 1.57
SNF8-205ENST00000507302 NWD2Q9ULI1 1742 aa24.81■■□□□ 1.56
SNF8-205ENST00000507302 SIRT1Q96EB6 747 aa24.81■■□□□ 1.56
SNF8-205ENST00000507302 RGPD8O14715 1765 aaPredicted RBP24.8■■□□□ 1.56
SNF8-205ENST00000507302 ABCA3Q99758 1704 aa24.79■■□□□ 1.56
SNF8-205ENST00000507302 YTHDC2Q9H6S0 1430 aaKnown RBP24.78■■□□□ 1.56
SNF8-205ENST00000507302 ONECUT3O60422 494 aaPredicted RBP24.78■■□□□ 1.56
SNF8-205ENST00000507302 PLCH1Q4KWH8 1693 aa24.78■■□□□ 1.56
SNF8-205ENST00000507302 NUTM2FA1L443 756 aa24.76■■□□□ 1.55
SNF8-205ENST00000507302 STK26Q9P289 416 aa24.76■■□□□ 1.55
SNF8-205ENST00000507302 TNS3Q68CZ2 1445 aa24.76■■□□□ 1.55
SNF8-205ENST00000507302 TMEM132EQ6IEE7 984 aa24.75■■□□□ 1.55
SNF8-205ENST00000507302 NRXN1Q9ULB1 1477 aa24.75■■□□□ 1.55
SNF8-205ENST00000507302 VPS72Q15906 364 aa24.74■■□□□ 1.55
SNF8-205ENST00000507302 KRT28Q7Z3Y7 464 aa24.74■■□□□ 1.55
SNF8-205ENST00000507302 LRP5O75197 1615 aa24.74■■□□□ 1.55
SNF8-205ENST00000507302 SBNO1A3KN83 1393 aa24.73■■□□□ 1.55
SNF8-205ENST00000507302 RGL3Q3MIN7 710 aa24.71■■□□□ 1.55
SNF8-205ENST00000507302 SEPT12Q8IYM1 358 aa24.7■■□□□ 1.54
SNF8-205ENST00000507302 C14orf93Q9H972 538 aaKnown RBP24.7■■□□□ 1.54
SNF8-205ENST00000507302 PHF8Q9UPP1 1060 aa24.69■■□□□ 1.54
SNF8-205ENST00000507302 NRAPQ86VF7 1730 aa24.69■■□□□ 1.54
SNF8-205ENST00000507302 DEFB132Q7Z7B7 95 aa24.68■■□□□ 1.54
SNF8-205ENST00000507302 PSME1Q06323 249 aa24.67■■□□□ 1.54
SNF8-205ENST00000507302 MPHOSPH9Q99550 1183 aa24.67■■□□□ 1.54
SNF8-205ENST00000507302 ADGRB2O60241 1585 aa24.66■■□□□ 1.54
SNF8-205ENST00000507302 TRPM3Q9HCF6 1732 aaPredicted RBP24.66■■□□□ 1.54
SNF8-205ENST00000507302 ARHGEF10O15013 1369 aa24.66■■□□□ 1.54
SNF8-205ENST00000507302 DLC1Q96QB1 1528 aa24.66■■□□□ 1.54
SNF8-205ENST00000507302 ANKARQ7Z5J8 1434 aa24.64■■□□□ 1.54
SNF8-205ENST00000507302 CABLES1Q8TDN4 633 aa24.64■■□□□ 1.54
SNF8-205ENST00000507302 ALS2Q96Q42 1657 aa24.63■■□□□ 1.53
SNF8-205ENST00000507302 KRT27Q7Z3Y8 459 aa24.62■■□□□ 1.53
SNF8-205ENST00000507302 DHX57Q6P158 1386 aaKnown RBP24.62■■□□□ 1.53
SNF8-205ENST00000507302 FAM83GA6ND36 823 aa24.6■■□□□ 1.53
SNF8-205ENST00000507302 CRYBG1Q9Y4K1 1723 aa24.6■■□□□ 1.53
SNF8-205ENST00000507302 SF3B2Q13435 895 aaKnown RBP24.59■■□□□ 1.53
SNF8-205ENST00000507302 COL14A1Q05707 1796 aaKnown RBP24.59■■□□□ 1.53
SNF8-205ENST00000507302 CFAP70Q5T0N1 1121 aa24.58■■□□□ 1.53
SNF8-205ENST00000507302 ADGRB1O14514 1584 aa24.58■■□□□ 1.52
SNF8-205ENST00000507302 RGPD1P0DJD0 1748 aa24.56■■□□□ 1.52
SNF8-205ENST00000507302 HAP1P54257 671 aaPredicted RBP24.56■■□□□ 1.52
SNF8-205ENST00000507302 PRAM1Q96QH2 718 aa24.56■■□□□ 1.52
SNF8-205ENST00000507302 THSD7AQ9UPZ6 1657 aa24.55■■□□□ 1.52
SNF8-205ENST00000507302 DISP2A7MBM2 1401 aa24.53■■□□□ 1.52
SNF8-205ENST00000507302 ACIN1Q9UKV3 1341 aaKnown RBP24.53■■□□□ 1.52
SNF8-205ENST00000507302 BAG6P46379 1132 aa24.51■■□□□ 1.51
SNF8-205ENST00000507302 CCDC9Q9Y3X0 531 aaKnown RBP24.51■■□□□ 1.51
SNF8-205ENST00000507302 TNS1Q9HBL0 1735 aaKnown RBP24.51■■□□□ 1.51
SNF8-205ENST00000507302 HRCP23327 699 aa24.5■■□□□ 1.51
SNF8-205ENST00000507302 PMFBP1Q8TBY8 1022 aa24.5■■□□□ 1.51
SNF8-205ENST00000507302 TULP4Q9NRJ4 1543 aa24.5■■□□□ 1.51
SNF8-205ENST00000507302 BTG4Q9NY30 223 aa24.49■■□□□ 1.51
SNF8-205ENST00000507302 FAM98CQ17RN3 349 aaKnown RBP24.48■■□□□ 1.51
SNF8-205ENST00000507302 SPATA31A5Q5VU36 1347 aa24.48■■□□□ 1.51
SNF8-205ENST00000507302 LMOD2Q6P5Q4 547 aa24.48■■□□□ 1.51
SNF8-205ENST00000507302 SPATA31A7Q8IWB4 1347 aa24.48■■□□□ 1.51
SNF8-205ENST00000507302 PRR36Q9H6K5 1346 aa24.48■■□□□ 1.51
SNF8-205ENST00000507302 SAFB2Q14151 953 aaKnown RBP eCLIP24.47■■□□□ 1.51
SNF8-205ENST00000507302 EIF3AQ14152 1382 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms