RNA–Protein interactions for RNA: ENST00000507223.1

HMGCLL1-207, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 3

Gene HMGCLL1, Length 512 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-207ENST00000507223 ATP6V1AP38606 617 aa9.47□□□□□ -0.89
HMGCLL1-207ENST00000507223 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
HMGCLL1-207ENST00000507223 BARGINQ6ZT62 677 aa9.47□□□□□ -0.89
HMGCLL1-207ENST00000507223 PRDM9Q9NQV7 894 aa9.47□□□□□ -0.89
HMGCLL1-207ENST00000507223 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
HMGCLL1-207ENST00000507223 MINK1Q8N4C8 1332 aaPredicted RBP9.46□□□□□ -0.9
HMGCLL1-207ENST00000507223 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
HMGCLL1-207ENST00000507223 NFX1Q12986 1120 aaKnown RBP9.45□□□□□ -0.9
HMGCLL1-207ENST00000507223 NLRP7Q8WX94 980 aa9.45□□□□□ -0.9
HMGCLL1-207ENST00000507223 TTC24A2A3L6 582 aaPredicted RBP9.44□□□□□ -0.9
HMGCLL1-207ENST00000507223 CCDC102AQ96A19 550 aa9.44□□□□□ -0.9
HMGCLL1-207ENST00000507223 ZBTB24O43167 697 aaPredicted RBP9.43□□□□□ -0.9
HMGCLL1-207ENST00000507223 GCGRP47871 477 aa9.43□□□□□ -0.9
HMGCLL1-207ENST00000507223 BRICD5Q6PL45 260 aa9.43□□□□□ -0.9
HMGCLL1-207ENST00000507223 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
HMGCLL1-207ENST00000507223 WIPF1O43516 503 aa9.41□□□□□ -0.9
HMGCLL1-207ENST00000507223 RNF19BQ6ZMZ0 732 aa9.41□□□□□ -0.9
HMGCLL1-207ENST00000507223 BCANQ96GW7 911 aa9.41□□□□□ -0.9
HMGCLL1-207ENST00000507223 SMPD1P17405 629 aa9.4□□□□□ -0.9
HMGCLL1-207ENST00000507223 MSS51Q4VC12 460 aa9.4□□□□□ -0.9
HMGCLL1-207ENST00000507223 STK17AQ9UEE5 414 aa9.4□□□□□ -0.9
HMGCLL1-207ENST00000507223 WNT7AO00755 349 aa9.39□□□□□ -0.91
HMGCLL1-207ENST00000507223 SNIP1Q8TAD8 396 aaKnown RBP9.39□□□□□ -0.91
HMGCLL1-207ENST00000507223 ATP13A2Q9NQ11 1180 aa9.39□□□□□ -0.91
HMGCLL1-207ENST00000507223 SNRPBP14678 240 aaKnown RBP9.38□□□□□ -0.91
HMGCLL1-207ENST00000507223 SULF1Q8IWU6 871 aa9.38□□□□□ -0.91
HMGCLL1-207ENST00000507223 INSM1Q01101 510 aaPredicted RBP9.37□□□□□ -0.91
HMGCLL1-207ENST00000507223 TRIM32Q13049 653 aa9.37□□□□□ -0.91
HMGCLL1-207ENST00000507223 LCE2CQ5TA81 110 aa9.37□□□□□ -0.91
HMGCLL1-207ENST00000507223 J3QL48 77 aa9.36□□□□□ -0.91
HMGCLL1-207ENST00000507223 MRGPRX2Q96LB1 330 aa9.36□□□□□ -0.91
HMGCLL1-207ENST00000507223 REPIN1Q9BWE0 567 aaKnown RBP9.36□□□□□ -0.91
HMGCLL1-207ENST00000507223 TERTO14746 1132 aaKnown RBP9.34□□□□□ -0.91
HMGCLL1-207ENST00000507223 AMHR2Q16671 573 aa9.34□□□□□ -0.91
HMGCLL1-207ENST00000507223 GRIPAP1Q4V328 841 aa9.34□□□□□ -0.91
HMGCLL1-207ENST00000507223 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
HMGCLL1-207ENST00000507223 MMP16P51512 607 aa9.33□□□□□ -0.92
HMGCLL1-207ENST00000507223 MDM2Q00987 491 aaPredicted RBP9.33□□□□□ -0.92
HMGCLL1-207ENST00000507223 CD46P15529 392 aa9.32□□□□□ -0.92
HMGCLL1-207ENST00000507223 HPS1Q92902 700 aa9.32□□□□□ -0.92
HMGCLL1-207ENST00000507223 SENP2Q9HC62 589 aa9.32□□□□□ -0.92
HMGCLL1-207ENST00000507223 FAM217BQ9NTX9 383 aaPredicted RBP9.31□□□□□ -0.92
HMGCLL1-207ENST00000507223 TRIM66O15016 1216 aa9.3□□□□□ -0.92
HMGCLL1-207ENST00000507223 Q3C1V9 767 aa9.3□□□□□ -0.92
HMGCLL1-207ENST00000507223 GPCPD1Q9NPB8 672 aa9.29□□□□□ -0.92
HMGCLL1-207ENST00000507223 USB1Q9BQ65 265 aaKnown RBP9.28□□□□□ -0.92
HMGCLL1-207ENST00000507223 DXOO77932 396 aaKnown RBP9.27□□□□□ -0.93
HMGCLL1-207ENST00000507223 CLCN1P35523 988 aa9.27□□□□□ -0.93
HMGCLL1-207ENST00000507223 RC3H1Q5TC82 1133 aaKnown RBP9.27□□□□□ -0.93
HMGCLL1-207ENST00000507223 KRI1Q8N9T8 703 aaKnown RBP9.27□□□□□ -0.93
HMGCLL1-207ENST00000507223 KIFC2Q96AC6 838 aa9.27□□□□□ -0.93
HMGCLL1-207ENST00000507223 AK7Q96M32 723 aa9.27□□□□□ -0.93
HMGCLL1-207ENST00000507223 SKOR1P84550 965 aa9.26□□□□□ -0.93
HMGCLL1-207ENST00000507223 PARP9Q8IXQ6 854 aa9.26□□□□□ -0.93
HMGCLL1-207ENST00000507223 CCDC24Q8N4L8 307 aa9.26□□□□□ -0.93
HMGCLL1-207ENST00000507223 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
HMGCLL1-207ENST00000507223 KDM4AO75164 1064 aa9.24□□□□□ -0.93
HMGCLL1-207ENST00000507223 HLA-CQ95604 372 aa9.24□□□□□ -0.93
HMGCLL1-207ENST00000507223 NISCHQ9Y2I1 1504 aa9.24□□□□□ -0.93
HMGCLL1-207ENST00000507223 WNT7BP56706 349 aa9.22□□□□□ -0.93
HMGCLL1-207ENST00000507223 GIGYF2Q6Y7W6 1299 aaKnown RBP9.22□□□□□ -0.93
HMGCLL1-207ENST00000507223 ALDH1A1P00352 501 aa9.21□□□□□ -0.94
HMGCLL1-207ENST00000507223 MS4A1P11836 297 aa9.2□□□□□ -0.94
HMGCLL1-207ENST00000507223 SSTR3P32745 418 aaPredicted RBP9.2□□□□□ -0.94
HMGCLL1-207ENST00000507223 PDE4DQ08499 809 aa9.2□□□□□ -0.94
HMGCLL1-207ENST00000507223 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
HMGCLL1-207ENST00000507223 NXF1Q9UBU9 619 aaKnown RBP9.2□□□□□ -0.94
HMGCLL1-207ENST00000507223 BMP1P13497 986 aa9.18□□□□□ -0.94
HMGCLL1-207ENST00000507223 SIAH2O43255 324 aa9.17□□□□□ -0.94
HMGCLL1-207ENST00000507223 HOXA2O43364 376 aa9.17□□□□□ -0.94
HMGCLL1-207ENST00000507223 GMPRP36959 345 aa9.17□□□□□ -0.94
HMGCLL1-207ENST00000507223 USP46P62068 366 aa9.17□□□□□ -0.94
HMGCLL1-207ENST00000507223 TTLL12Q14166 644 aaPredicted RBP9.17□□□□□ -0.94
HMGCLL1-207ENST00000507223 TRIM46Q7Z4K8 759 aa9.17□□□□□ -0.94
HMGCLL1-207ENST00000507223 FAM181BA6NEQ2 426 aa9.16□□□□□ -0.94
HMGCLL1-207ENST00000507223 LORP23490 312 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-207ENST00000507223 GUCA2AQ02747 115 aa9.16□□□□□ -0.94
HMGCLL1-207ENST00000507223 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-207ENST00000507223 JUNDP17535 347 aa9.15□□□□□ -0.94
HMGCLL1-207ENST00000507223 PTCRAQ6ISU1 281 aaPredicted RBP9.15□□□□□ -0.94
HMGCLL1-207ENST00000507223 CAPN5O15484 640 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-207ENST00000507223 VEGFBP49765 207 aa9.14□□□□□ -0.95
HMGCLL1-207ENST00000507223 ZSCAN1Q8NBB4 408 aa9.14□□□□□ -0.95
HMGCLL1-207ENST00000507223 EHBP1Q8NDI1 1231 aa9.14□□□□□ -0.95
HMGCLL1-207ENST00000507223 SPIRE2Q8WWL2 714 aa9.14□□□□□ -0.95
HMGCLL1-207ENST00000507223 IRF7Q92985 503 aa9.14□□□□□ -0.95
HMGCLL1-207ENST00000507223 NPAS3Q8IXF0 933 aa9.13□□□□□ -0.95
HMGCLL1-207ENST00000507223 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
HMGCLL1-207ENST00000507223 WASF2Q9Y6W5 498 aa9.13□□□□□ -0.95
HMGCLL1-207ENST00000507223 BEGAINQ9BUH8 593 aa9.12□□□□□ -0.95
HMGCLL1-207ENST00000507223 PCDHGC3Q9UN70 934 aa9.12□□□□□ -0.95
HMGCLL1-207ENST00000507223 H3BM21 787 aa9.1□□□□□ -0.95
HMGCLL1-207ENST00000507223 ERBB4Q15303 1308 aa9.09□□□□□ -0.95
HMGCLL1-207ENST00000507223 SH3BP2P78314 561 aa9.09□□□□□ -0.95
HMGCLL1-207ENST00000507223 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
HMGCLL1-207ENST00000507223 MOXD2PA6NHM9 499 aa9.08□□□□□ -0.96
HMGCLL1-207ENST00000507223 ZFP42Q96MM3 310 aa9.08□□□□□ -0.96
HMGCLL1-207ENST00000507223 TBC1D2Q9BYX2 928 aa9.08□□□□□ -0.96
HMGCLL1-207ENST00000507223 NDUFV2P19404 249 aa9.07□□□□□ -0.96
HMGCLL1-207ENST00000507223 GPBP1L1Q9HC44 474 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms