RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 ATP10BO94823 1461 aa11.42□□□□□ -0.58
NR1I3-224ENST00000507215 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
NR1I3-224ENST00000507215 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
NR1I3-224ENST00000507215 SLC24A3Q9HC58 644 aa11.41□□□□□ -0.58
NR1I3-224ENST00000507215 RABGEF1Q9UJ41 708 aa11.41□□□□□ -0.58
NR1I3-224ENST00000507215 LMTK3Q96Q04 1460 aa11.4□□□□□ -0.58
NR1I3-224ENST00000507215 IRF6O14896 467 aa11.4□□□□□ -0.58
NR1I3-224ENST00000507215 MAP2K5Q13163 448 aa11.4□□□□□ -0.58
NR1I3-224ENST00000507215 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-224ENST00000507215 NUDT18Q6ZVK8 323 aa11.39□□□□□ -0.59
NR1I3-224ENST00000507215 TATDN2Q93075 761 aa11.39□□□□□ -0.59
NR1I3-224ENST00000507215 PHOX2BQ99453 314 aa11.39□□□□□ -0.59
NR1I3-224ENST00000507215 CFAP74Q9C0B2 1584 aa11.39□□□□□ -0.59
NR1I3-224ENST00000507215 SEPT9Q9UHD8 586 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-224ENST00000507215 ARHGEF40Q8TER5 1519 aa11.39□□□□□ -0.59
NR1I3-224ENST00000507215 PACS2Q86VP3 889 aa11.38□□□□□ -0.59
NR1I3-224ENST00000507215 CCDC102AQ96A19 550 aa11.38□□□□□ -0.59
NR1I3-224ENST00000507215 EYA1Q99502 592 aa11.38□□□□□ -0.59
NR1I3-224ENST00000507215 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
NR1I3-224ENST00000507215 MADDQ8WXG6 1647 aa11.38□□□□□ -0.59
NR1I3-224ENST00000507215 FANCAO15360 1455 aa11.38□□□□□ -0.59
NR1I3-224ENST00000507215 MINK1Q8N4C8 1332 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-224ENST00000507215 RAPGEF3O95398 923 aa11.37□□□□□ -0.59
NR1I3-224ENST00000507215 KRI1Q8N9T8 703 aaKnown RBP11.37□□□□□ -0.59
NR1I3-224ENST00000507215 PCDH10Q9P2E7 1040 aa11.37□□□□□ -0.59
NR1I3-224ENST00000507215 DENND4BO75064 1496 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-224ENST00000507215 RAPGEF6Q8TEU7 1601 aa11.36□□□□□ -0.59
NR1I3-224ENST00000507215 MAGI2Q86UL8 1455 aa11.36□□□□□ -0.59
NR1I3-224ENST00000507215 FHOD3Q2V2M9 1422 aa11.35□□□□□ -0.59
NR1I3-224ENST00000507215 AKNAQ7Z591 1439 aa11.35□□□□□ -0.59
NR1I3-224ENST00000507215 PXYLP1Q8TE99 480 aa11.35□□□□□ -0.59
NR1I3-224ENST00000507215 NLRP7Q8WX94 980 aa11.35□□□□□ -0.59
NR1I3-224ENST00000507215 SAMD9Q5K651 1589 aa11.35□□□□□ -0.59
NR1I3-224ENST00000507215 FRMPD1Q5SYB0 1578 aa11.35□□□□□ -0.59
NR1I3-224ENST00000507215 METTL3Q86U44 580 aaKnown RBP11.34□□□□□ -0.59
NR1I3-224ENST00000507215 EFCAB5A4FU69 1503 aa11.34□□□□□ -0.59
NR1I3-224ENST00000507215 ZMYM4Q5VZL5 1548 aa11.34□□□□□ -0.59
NR1I3-224ENST00000507215 NBPF26B4DH59 902 aa11.33□□□□□ -0.6
NR1I3-224ENST00000507215 RIMS1Q86UR5 1692 aaKnown RBP11.33□□□□□ -0.6
NR1I3-224ENST00000507215 PLEKHD1A6NEE1 506 aa11.32□□□□□ -0.6
NR1I3-224ENST00000507215 RICTORQ6R327 1708 aa11.32□□□□□ -0.6
NR1I3-224ENST00000507215 OATP04181 439 aa11.3□□□□□ -0.6
NR1I3-224ENST00000507215 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
NR1I3-224ENST00000507215 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
NR1I3-224ENST00000507215 AK7Q96M32 723 aa11.3□□□□□ -0.6
NR1I3-224ENST00000507215 NUP153P49790 1475 aaKnown RBP11.3□□□□□ -0.6
NR1I3-224ENST00000507215 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
NR1I3-224ENST00000507215 RCCD1A6NED2 376 aa11.29□□□□□ -0.6
NR1I3-224ENST00000507215 ARID3CA6NKF2 412 aa11.29□□□□□ -0.6
NR1I3-224ENST00000507215 TRIM66O15016 1216 aa11.29□□□□□ -0.6
NR1I3-224ENST00000507215 MRPL50Q8N5N7 158 aaKnown RBP11.29□□□□□ -0.6
NR1I3-224ENST00000507215 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
NR1I3-224ENST00000507215 TTC37Q6PGP7 1564 aa11.28□□□□□ -0.6
NR1I3-224ENST00000507215 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
NR1I3-224ENST00000507215 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
NR1I3-224ENST00000507215 ZFRQ96KR1 1074 aaKnown RBP11.27□□□□□ -0.61
NR1I3-224ENST00000507215 REPIN1Q9BWE0 567 aaKnown RBP11.26□□□□□ -0.61
NR1I3-224ENST00000507215 FER1L4A9Z1Z3 1794 aa11.26□□□□□ -0.61
NR1I3-224ENST00000507215 EEA1Q15075 1411 aa11.26□□□□□ -0.61
NR1I3-224ENST00000507215 PREX1Q8TCU6 1659 aa11.25□□□□□ -0.61
NR1I3-224ENST00000507215 YEATS2Q9ULM3 1422 aa11.25□□□□□ -0.61
NR1I3-224ENST00000507215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.25□□□□□ -0.61
NR1I3-224ENST00000507215 HSPA2P54652 639 aa11.24□□□□□ -0.61
NR1I3-224ENST00000507215 TMEM134Q9H6X4 195 aa11.24□□□□□ -0.61
NR1I3-224ENST00000507215 SETD1BQ9UPS6 1966 aaKnown RBP11.24□□□□□ -0.61
NR1I3-224ENST00000507215 SOCS7O14512 581 aa11.23□□□□□ -0.61
NR1I3-224ENST00000507215 DNAJB2P25686 324 aa11.23□□□□□ -0.61
NR1I3-224ENST00000507215 SWT1Q5T5J6 900 aaKnown RBP11.23□□□□□ -0.61
NR1I3-224ENST00000507215 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
NR1I3-224ENST00000507215 TMUB1Q9BVT8 246 aa11.23□□□□□ -0.61
NR1I3-224ENST00000507215 C9orf84Q5VXU9 1444 aa11.23□□□□□ -0.61
NR1I3-224ENST00000507215 ATP10AO60312 1499 aa11.23□□□□□ -0.61
NR1I3-224ENST00000507215 ARHGEF12Q9NZN5 1544 aa11.23□□□□□ -0.61
NR1I3-224ENST00000507215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.22□□□□□ -0.61
NR1I3-224ENST00000507215 PLCH2O75038 1416 aa11.22□□□□□ -0.61
NR1I3-224ENST00000507215 MDM2Q00987 491 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-224ENST00000507215 AMHR2Q16671 573 aa11.22□□□□□ -0.61
NR1I3-224ENST00000507215 STAC3Q96MF2 364 aa11.22□□□□□ -0.61
NR1I3-224ENST00000507215 HECW1Q76N89 1606 aa11.21□□□□□ -0.61
NR1I3-224ENST00000507215 PDE4DQ08499 809 aa11.21□□□□□ -0.61
NR1I3-224ENST00000507215 MYT1LQ9UL68 1186 aa11.21□□□□□ -0.61
NR1I3-224ENST00000507215 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
NR1I3-224ENST00000507215 UHRF1BP1Q6BDS2 1440 aa11.2□□□□□ -0.62
NR1I3-224ENST00000507215 SCAPERQ9BY12 1400 aa11.2□□□□□ -0.62
NR1I3-224ENST00000507215 DISP3Q9P2K9 1392 aa11.2□□□□□ -0.62
NR1I3-224ENST00000507215 CDK11AQ9UQ88 783 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-224ENST00000507215 ZNF518AQ6AHZ1 1483 aa11.19□□□□□ -0.62
NR1I3-224ENST00000507215 BCAMP50895 628 aa11.19□□□□□ -0.62
NR1I3-224ENST00000507215 EFCAB2Q5VUJ9 269 aa11.19□□□□□ -0.62
NR1I3-224ENST00000507215 PARP9Q8IXQ6 854 aa11.19□□□□□ -0.62
NR1I3-224ENST00000507215 WNT2BQ93097 391 aa11.19□□□□□ -0.62
NR1I3-224ENST00000507215 KCTD12Q96CX2 325 aaKnown RBP11.19□□□□□ -0.62
NR1I3-224ENST00000507215 PTPRTO14522 1441 aa11.18□□□□□ -0.62
NR1I3-224ENST00000507215 GOLGA8CPA6NN73 597 aa11.18□□□□□ -0.62
NR1I3-224ENST00000507215 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
NR1I3-224ENST00000507215 MMRN1Q13201 1228 aa11.17□□□□□ -0.62
NR1I3-224ENST00000507215 DAXXQ9UER7 740 aaPredicted RBP11.17□□□□□ -0.62
NR1I3-224ENST00000507215 MYO5CQ9NQX4 1742 aa11.16□□□□□ -0.62
NR1I3-224ENST00000507215 SOWAHBA6NEL2 793 aa11.16□□□□□ -0.62
NR1I3-224ENST00000507215 MLECQ14165 292 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms