RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 TRAK1Q9UPV9 953 aa28.53■■■□□ 2.16
DDR1-259ENST00000507046 CLSPNQ9HAW4 1339 aa28.52■■■□□ 2.16
DDR1-259ENST00000507046 PRAM1Q96QH2 718 aa28.52■■■□□ 2.16
DDR1-259ENST00000507046 POGKQ9P215 609 aa28.51■■■□□ 2.15
DDR1-259ENST00000507046 TRPM1Q7Z4N2 1603 aa28.49■■■□□ 2.15
DDR1-259ENST00000507046 ARHGEF28Q8N1W1 1705 aaKnown RBP28.48■■■□□ 2.15
DDR1-259ENST00000507046 SAFB2Q14151 953 aaKnown RBP eCLIP28.46■■■□□ 2.15
DDR1-259ENST00000507046 NBPF1Q3BBV0 1214 aa28.46■■■□□ 2.15
DDR1-259ENST00000507046 C1orf167Q5SNV9 1468 aa28.46■■■□□ 2.15
DDR1-259ENST00000507046 BRINP3Q76B58 766 aa28.44■■■□□ 2.14
DDR1-259ENST00000507046 PHLPP1O60346 1717 aa28.43■■■□□ 2.14
DDR1-259ENST00000507046 ADGRB2O60241 1585 aa28.43■■■□□ 2.14
DDR1-259ENST00000507046 CCER1Q8TC90 406 aaPredicted RBP28.43■■■□□ 2.14
DDR1-259ENST00000507046 ROCK2O75116 1388 aaKnown RBP28.42■■■□□ 2.14
DDR1-259ENST00000507046 FMN2Q9NZ56 1722 aa28.42■■■□□ 2.14
DDR1-259ENST00000507046 AHDC1Q5TGY3 1603 aaPredicted RBP28.42■■■□□ 2.14
DDR1-259ENST00000507046 NBPF8Q3BBV2 869 aa28.38■■■□□ 2.13
DDR1-259ENST00000507046 NHSL1Q5SYE7 1610 aa28.36■■■□□ 2.13
DDR1-259ENST00000507046 MINK1Q8N4C8 1332 aaPredicted RBP28.36■■■□□ 2.13
DDR1-259ENST00000507046 COL16A1Q07092 1604 aaPredicted RBP28.36■■■□□ 2.13
DDR1-259ENST00000507046 RALGAPBQ86X10 1494 aa28.35■■■□□ 2.13
DDR1-259ENST00000507046 NUTM2FA1L443 756 aa28.34■■■□□ 2.13
DDR1-259ENST00000507046 EIF3AQ14152 1382 aaKnown RBP28.34■■■□□ 2.13
DDR1-259ENST00000507046 ORAI2Q96SN7 254 aa28.33■■■□□ 2.13
DDR1-259ENST00000507046 HIRIP3Q9BW71 556 aaPredicted RBP28.33■■■□□ 2.13
DDR1-259ENST00000507046 TIMELESSQ9UNS1 1208 aa28.33■■■□□ 2.13
DDR1-259ENST00000507046 GPRASP1Q5JY77 1395 aa28.33■■■□□ 2.13
DDR1-259ENST00000507046 ESCO1Q5FWF5 840 aa28.32■■■□□ 2.12
DDR1-259ENST00000507046 CENPJQ9HC77 1338 aaPredicted RBP28.31■■■□□ 2.12
DDR1-259ENST00000507046 ANKARQ7Z5J8 1434 aa28.3■■■□□ 2.12
DDR1-259ENST00000507046 KIF1AQ12756 1690 aa28.29■■■□□ 2.12
DDR1-259ENST00000507046 WASLO00401 505 aaPredicted RBP28.28■■■□□ 2.12
DDR1-259ENST00000507046 QRICH2Q9H0J4 1663 aa28.28■■■□□ 2.12
DDR1-259ENST00000507046 TULP4Q9NRJ4 1543 aa28.28■■■□□ 2.12
DDR1-259ENST00000507046 JCADQ9P266 1359 aa28.27■■■□□ 2.12
DDR1-259ENST00000507046 CARD11Q9BXL7 1154 aa28.27■■■□□ 2.12
DDR1-259ENST00000507046 USP32Q8NFA0 1604 aa28.25■■■□□ 2.11
DDR1-259ENST00000507046 NPHP3Q7Z494 1330 aa28.24■■■□□ 2.11
DDR1-259ENST00000507046 DDX17Q92841 729 aaKnown RBP28.24■■■□□ 2.11
DDR1-259ENST00000507046 RGPD8O14715 1765 aaPredicted RBP28.24■■■□□ 2.11
DDR1-259ENST00000507046 MED1Q15648 1581 aaPredicted RBP28.23■■■□□ 2.11
DDR1-259ENST00000507046 SHPRHQ149N8 1683 aa28.21■■■□□ 2.11
DDR1-259ENST00000507046 LRRC59Q96AG4 307 aaKnown RBP28.2■■■□□ 2.1
DDR1-259ENST00000507046 PHF8Q9UPP1 1060 aa28.2■■■□□ 2.1
DDR1-259ENST00000507046 SOS2Q07890 1332 aaPredicted RBP28.19■■■□□ 2.1
DDR1-259ENST00000507046 ITSN1Q15811 1721 aa28.19■■■□□ 2.1
DDR1-259ENST00000507046 FOXO3O43524 673 aa28.18■■■□□ 2.1
DDR1-259ENST00000507046 CDK19Q9BWU1 502 aa28.18■■■□□ 2.1
DDR1-259ENST00000507046 ATP7BP35670 1465 aa28.18■■■□□ 2.1
DDR1-259ENST00000507046 PRR36Q9H6K5 1346 aa28.18■■■□□ 2.1
DDR1-259ENST00000507046 PXDNQ92626 1479 aa28.16■■■□□ 2.1
DDR1-259ENST00000507046 SPATA31A6Q5VVP1 1343 aa28.15■■■□□ 2.1
DDR1-259ENST00000507046 DISP3Q9P2K9 1392 aa28.13■■■□□ 2.09
DDR1-259ENST00000507046 SRPK2P78362 688 aaKnown RBP28.13■■■□□ 2.09
DDR1-259ENST00000507046 NUDT16Q96DE0 195 aaKnown RBP28.13■■■□□ 2.09
DDR1-259ENST00000507046 XPCQ01831 940 aaPredicted RBP28.12■■■□□ 2.09
DDR1-259ENST00000507046 EVC2Q86UK5 1308 aa28.12■■■□□ 2.09
DDR1-259ENST00000507046 PNPLA6Q8IY17 1366 aa28.11■■■□□ 2.09
DDR1-259ENST00000507046 SBNO2Q9Y2G9 1366 aa28.11■■■□□ 2.09
DDR1-259ENST00000507046 TOPAZ1Q8N9V7 1692 aa28.11■■■□□ 2.09
DDR1-259ENST00000507046 PMFBP1Q8TBY8 1022 aa28.11■■■□□ 2.09
DDR1-259ENST00000507046 PSME1Q06323 249 aa28.08■■■□□ 2.09
DDR1-259ENST00000507046 KRT28Q7Z3Y7 464 aa28.08■■■□□ 2.09
DDR1-259ENST00000507046 PHF23Q9BUL5 403 aaPredicted RBP28.07■■■□□ 2.08
DDR1-259ENST00000507046 CABP2Q9NPB3 220 aa28.07■■■□□ 2.08
DDR1-259ENST00000507046 CCDC61Q9Y6R9 512 aa28.07■■■□□ 2.08
DDR1-259ENST00000507046 NGDNQ8NEJ9 315 aaKnown RBP28.06■■■□□ 2.08
DDR1-259ENST00000507046 USP47Q96K76 1375 aa28.04■■■□□ 2.08
DDR1-259ENST00000507046 LRP6O75581 1613 aa28.03■■■□□ 2.08
DDR1-259ENST00000507046 COL22A1Q8NFW1 1626 aaPredicted RBP28.03■■■□□ 2.08
DDR1-259ENST00000507046 TNS3Q68CZ2 1445 aa28.03■■■□□ 2.08
DDR1-259ENST00000507046 PPIP5K1Q6PFW1 1433 aa28.03■■■□□ 2.08
DDR1-259ENST00000507046 SBNO1A3KN83 1393 aa28.03■■■□□ 2.08
DDR1-259ENST00000507046 SPATA31A3Q5VYP0 1347 aa28.02■■■□□ 2.08
DDR1-259ENST00000507046 NUTM2BA6NNL0 878 aaPredicted RBP28.01■■■□□ 2.07
DDR1-259ENST00000507046 NUTM2EB1AL46 878 aaPredicted RBP28.01■■■□□ 2.07
DDR1-259ENST00000507046 MEX3CQ5U5Q3 659 aaKnown RBP28.01■■■□□ 2.07
DDR1-259ENST00000507046 NUTM2AQ8IVF1 878 aaPredicted RBP28.01■■■□□ 2.07
DDR1-259ENST00000507046 POLR3AO14802 1390 aaPredicted RBP27.99■■■□□ 2.07
DDR1-259ENST00000507046 ATAD2Q6PL18 1390 aa27.99■■■□□ 2.07
DDR1-259ENST00000507046 TRPM3Q9HCF6 1732 aaPredicted RBP27.99■■■□□ 2.07
DDR1-259ENST00000507046 ST20-MTHFSA0A0A6YYL1 179 aa27.99■■■□□ 2.07
DDR1-259ENST00000507046 PLEKHG3A1L390 1219 aa27.99■■■□□ 2.07
DDR1-259ENST00000507046 ARHGEF10O15013 1369 aa27.98■■■□□ 2.07
DDR1-259ENST00000507046 ACEP12821 1306 aa27.97■■■□□ 2.07
DDR1-259ENST00000507046 SLC24A1O60721 1099 aa27.97■■■□□ 2.07
DDR1-259ENST00000507046 LMOD2Q6P5Q4 547 aa27.94■■■□□ 2.06
DDR1-259ENST00000507046 TESK2Q96S53 571 aa27.93■■■□□ 2.06
DDR1-259ENST00000507046 CABP1Q9NZU7 370 aa27.93■■■□□ 2.06
DDR1-259ENST00000507046 ALS2Q96Q42 1657 aa27.92■■■□□ 2.06
DDR1-259ENST00000507046 PAK3O75914 559 aaPredicted RBP27.91■■■□□ 2.06
DDR1-259ENST00000507046 ADAMTS2O95450 1211 aa27.88■■■□□ 2.05
DDR1-259ENST00000507046 HAP1P54257 671 aaPredicted RBP27.87■■■□□ 2.05
DDR1-259ENST00000507046 TMF1P82094 1093 aa27.87■■■□□ 2.05
DDR1-259ENST00000507046 PUS7Q96PZ0 661 aaKnown RBP27.87■■■□□ 2.05
DDR1-259ENST00000507046 BRD4O60885 1362 aaPredicted RBP27.86■■■□□ 2.05
DDR1-259ENST00000507046 USP6P35125 1406 aa27.85■■■□□ 2.05
DDR1-259ENST00000507046 ABCA3Q99758 1704 aa27.85■■■□□ 2.05
DDR1-259ENST00000507046 C8orf37Q96NL8 207 aa27.85■■■□□ 2.05
DDR1-259ENST00000507046 MARF1Q9Y4F3 1742 aaKnown RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms