RNA–Protein interactions for RNA: ENST00000507008.5

SLC41A3-209, Transcript of solute carrier family 41 member 3, humanhuman

TSL 3

Gene SLC41A3, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-209ENST00000507008 SETD1AO15047 1707 aaKnown RBP23.49■■□□□ 1.35
SLC41A3-209ENST00000507008 SOS2Q07890 1332 aaPredicted RBP23.49■■□□□ 1.35
SLC41A3-209ENST00000507008 PNPLA6Q8IY17 1366 aa23.49■■□□□ 1.35
SLC41A3-209ENST00000507008 NPHP3Q7Z494 1330 aa23.48■■□□□ 1.35
SLC41A3-209ENST00000507008 LRPPRCP42704 1394 aaKnown RBP23.48■■□□□ 1.35
SLC41A3-209ENST00000507008 WAPLQ7Z5K2 1190 aa23.47■■□□□ 1.35
SLC41A3-209ENST00000507008 ABCC11Q96J66 1382 aa23.47■■□□□ 1.35
SLC41A3-209ENST00000507008 ADAMTS2O95450 1211 aa23.46■■□□□ 1.35
SLC41A3-209ENST00000507008 QTRT2Q9H974 415 aaKnown RBP23.46■■□□□ 1.35
SLC41A3-209ENST00000507008 SIRT1Q96EB6 747 aa23.45■■□□□ 1.34
SLC41A3-209ENST00000507008 DHX57Q6P158 1386 aaKnown RBP23.44■■□□□ 1.34
SLC41A3-209ENST00000507008 C14orf93Q9H972 538 aaKnown RBP23.44■■□□□ 1.34
SLC41A3-209ENST00000507008 NUTM2FA1L443 756 aa23.42■■□□□ 1.34
SLC41A3-209ENST00000507008 FOXO3O43524 673 aa23.42■■□□□ 1.34
SLC41A3-209ENST00000507008 RBM6P78332 1123 aaKnown RBP23.42■■□□□ 1.34
SLC41A3-209ENST00000507008 TECPR2O15040 1411 aa23.42■■□□□ 1.34
SLC41A3-209ENST00000507008 PIK3C2GO75747 1445 aa23.42■■□□□ 1.34
SLC41A3-209ENST00000507008 YTHDC2Q9H6S0 1430 aaKnown RBP23.4■■□□□ 1.34
SLC41A3-209ENST00000507008 CFAP70Q5T0N1 1121 aa23.39■■□□□ 1.33
SLC41A3-209ENST00000507008 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
SLC41A3-209ENST00000507008 USP21Q9UK80 565 aa23.38■■□□□ 1.33
SLC41A3-209ENST00000507008 CDC42BPGQ6DT37 1551 aa23.38■■□□□ 1.33
SLC41A3-209ENST00000507008 STAC3Q96MF2 364 aa23.37■■□□□ 1.33
SLC41A3-209ENST00000507008 POGKQ9P215 609 aa23.37■■□□□ 1.33
SLC41A3-209ENST00000507008 IFT172Q9UG01 1749 aa23.36■■□□□ 1.33
SLC41A3-209ENST00000507008 LAMC1P11047 1609 aa23.36■■□□□ 1.33
SLC41A3-209ENST00000507008 CDK12Q9NYV4 1490 aaPredicted RBP23.36■■□□□ 1.33
SLC41A3-209ENST00000507008 PSME1Q06323 249 aa23.35■■□□□ 1.33
SLC41A3-209ENST00000507008 UPF1Q92900 1129 aaKnown RBP eCLIP23.35■■□□□ 1.33
SLC41A3-209ENST00000507008 TRPC5Q9UL62 973 aaPredicted RBP23.35■■□□□ 1.33
SLC41A3-209ENST00000507008 XPCQ01831 940 aaPredicted RBP23.34■■□□□ 1.33
SLC41A3-209ENST00000507008 PLEKHH1Q9ULM0 1364 aa23.34■■□□□ 1.33
SLC41A3-209ENST00000507008 KDM2AQ9Y2K7 1162 aa23.33■■□□□ 1.33
SLC41A3-209ENST00000507008 MYOM2P54296 1465 aa23.32■■□□□ 1.32
SLC41A3-209ENST00000507008 DCAF11Q8TEB1 546 aa23.32■■□□□ 1.32
SLC41A3-209ENST00000507008 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
SLC41A3-209ENST00000507008 SAFB2Q14151 953 aaKnown RBP eCLIP23.31■■□□□ 1.32
SLC41A3-209ENST00000507008 KRT28Q7Z3Y7 464 aa23.31■■□□□ 1.32
SLC41A3-209ENST00000507008 FNBP4Q8N3X1 1017 aaPredicted RBP23.31■■□□□ 1.32
SLC41A3-209ENST00000507008 KNDC1Q76NI1 1749 aa23.3■■□□□ 1.32
SLC41A3-209ENST00000507008 HAP1P54257 671 aaPredicted RBP23.3■■□□□ 1.32
SLC41A3-209ENST00000507008 PHF8Q9UPP1 1060 aa23.3■■□□□ 1.32
SLC41A3-209ENST00000507008 NRXN1Q9ULB1 1477 aa23.29■■□□□ 1.32
SLC41A3-209ENST00000507008 TRAK1Q9UPV9 953 aa23.26■■□□□ 1.31
SLC41A3-209ENST00000507008 SPATA31A3Q5VYP0 1347 aa23.26■■□□□ 1.31
SLC41A3-209ENST00000507008 PXDNQ92626 1479 aa23.25■■□□□ 1.31
SLC41A3-209ENST00000507008 LMOD2Q6P5Q4 547 aa23.24■■□□□ 1.31
SLC41A3-209ENST00000507008 COL22A1Q8NFW1 1626 aaPredicted RBP23.23■■□□□ 1.31
SLC41A3-209ENST00000507008 KIF1AQ12756 1690 aa23.22■■□□□ 1.31
SLC41A3-209ENST00000507008 FMN2Q9NZ56 1722 aa23.22■■□□□ 1.31
SLC41A3-209ENST00000507008 RGS12O14924 1447 aa23.2■■□□□ 1.3
SLC41A3-209ENST00000507008 EIF3AQ14152 1382 aaKnown RBP23.2■■□□□ 1.3
SLC41A3-209ENST00000507008 DLC1Q96QB1 1528 aa23.19■■□□□ 1.3
SLC41A3-209ENST00000507008 PMFBP1Q8TBY8 1022 aa23.19■■□□□ 1.3
SLC41A3-209ENST00000507008 ATAD2Q6PL18 1390 aa23.18■■□□□ 1.3
SLC41A3-209ENST00000507008 GJD4Q96KN9 370 aaPredicted RBP23.18■■□□□ 1.3
SLC41A3-209ENST00000507008 MINK1Q8N4C8 1332 aaPredicted RBP23.17■■□□□ 1.3
SLC41A3-209ENST00000507008 UNC5CLQ8IV45 518 aa23.17■■□□□ 1.3
SLC41A3-209ENST00000507008 HIRIP3Q9BW71 556 aaPredicted RBP23.17■■□□□ 1.3
SLC41A3-209ENST00000507008 ATRNO75882 1429 aa23.16■■□□□ 1.3
SLC41A3-209ENST00000507008 SBNO1A3KN83 1393 aa23.16■■□□□ 1.3
SLC41A3-209ENST00000507008 ARHGEF10O15013 1369 aa23.16■■□□□ 1.3
SLC41A3-209ENST00000507008 PLEKHG5O94827 1062 aa23.16■■□□□ 1.3
SLC41A3-209ENST00000507008 ANKARQ7Z5J8 1434 aa23.16■■□□□ 1.3
SLC41A3-209ENST00000507008 GPRASP1Q5JY77 1395 aa23.15■■□□□ 1.3
SLC41A3-209ENST00000507008 WASLO00401 505 aaPredicted RBP23.14■■□□□ 1.29
SLC41A3-209ENST00000507008 TNS3Q68CZ2 1445 aa23.14■■□□□ 1.29
SLC41A3-209ENST00000507008 BCL9LQ86UU0 1499 aa23.13■■□□□ 1.29
SLC41A3-209ENST00000507008 NGDNQ8NEJ9 315 aaKnown RBP23.13■■□□□ 1.29
SLC41A3-209ENST00000507008 CCDC125Q86Z20 511 aa23.12■■□□□ 1.29
SLC41A3-209ENST00000507008 CABLES1Q8TDN4 633 aa23.11■■□□□ 1.29
SLC41A3-209ENST00000507008 ADGRB1O14514 1584 aa23.1■■□□□ 1.29
SLC41A3-209ENST00000507008 CCDC9Q9Y3X0 531 aaKnown RBP23.1■■□□□ 1.29
SLC41A3-209ENST00000507008 RGPD8O14715 1765 aaPredicted RBP23.09■■□□□ 1.29
SLC41A3-209ENST00000507008 MARF1Q9Y4F3 1742 aaKnown RBP23.09■■□□□ 1.29
SLC41A3-209ENST00000507008 PAK3O75914 559 aaPredicted RBP23.07■■□□□ 1.28
SLC41A3-209ENST00000507008 ADGRB2O60241 1585 aa23.06■■□□□ 1.28
SLC41A3-209ENST00000507008 SLIT2O94813 1529 aa23.05■■□□□ 1.28
SLC41A3-209ENST00000507008 VPS72Q15906 364 aa23.05■■□□□ 1.28
SLC41A3-209ENST00000507008 NUDT16Q96DE0 195 aaKnown RBP23.04■■□□□ 1.28
SLC41A3-209ENST00000507008 TULP4Q9NRJ4 1543 aa23.03■■□□□ 1.28
SLC41A3-209ENST00000507008 USP32Q8NFA0 1604 aa23.02■■□□□ 1.28
SLC41A3-209ENST00000507008 CDK19Q9BWU1 502 aa23.02■■□□□ 1.28
SLC41A3-209ENST00000507008 PRR36Q9H6K5 1346 aa23.02■■□□□ 1.28
SLC41A3-209ENST00000507008 FAM83GA6ND36 823 aa23.01■■□□□ 1.27
SLC41A3-209ENST00000507008 RALGAPBQ86X10 1494 aa23■■□□□ 1.27
SLC41A3-209ENST00000507008 SF3B2Q13435 895 aaKnown RBP23■■□□□ 1.27
SLC41A3-209ENST00000507008 A0A0G2JS52 829 aa22.99■■□□□ 1.27
SLC41A3-209ENST00000507008 MYT1Q01538 1121 aa22.99■■□□□ 1.27
SLC41A3-209ENST00000507008 SEPT12Q8IYM1 358 aa22.99■■□□□ 1.27
SLC41A3-209ENST00000507008 CCDC61Q9Y6R9 512 aa22.99■■□□□ 1.27
SLC41A3-209ENST00000507008 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.99■■□□□ 1.27
SLC41A3-209ENST00000507008 BTG4Q9NY30 223 aa22.98■■□□□ 1.27
SLC41A3-209ENST00000507008 ZRANB1Q9UGI0 708 aa22.98■■□□□ 1.27
SLC41A3-209ENST00000507008 ONECUT3O60422 494 aaPredicted RBP22.95■■□□□ 1.26
SLC41A3-209ENST00000507008 SRPK2P78362 688 aaKnown RBP22.94■■□□□ 1.26
SLC41A3-209ENST00000507008 NBPF1Q3BBV0 1214 aa22.94■■□□□ 1.26
SLC41A3-209ENST00000507008 KRT27Q7Z3Y8 459 aa22.94■■□□□ 1.26
SLC41A3-209ENST00000507008 PRDM11Q9NQV5 511 aa22.94■■□□□ 1.26
SLC41A3-209ENST00000507008 PCGF6Q9BYE7 350 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms