RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 ADAMTSL3P82987 1691 aa14.54□□□□□ -0.08
CLCN3-205ENST00000506924 MADDQ8WXG6 1647 aa14.53□□□□□ -0.08
CLCN3-205ENST00000506924 TCOF1Q13428 1488 aaKnown RBP14.53□□□□□ -0.08
CLCN3-205ENST00000506924 CHIC2Q9UKJ5 165 aa14.53□□□□□ -0.08
CLCN3-205ENST00000506924 A2MP01023 1474 aa14.52□□□□□ -0.08
CLCN3-205ENST00000506924 RTEL1-TNFRSF6BF6WH68 1400 aa14.52□□□□□ -0.08
CLCN3-205ENST00000506924 ABCC5O15440 1437 aa14.52□□□□□ -0.08
CLCN3-205ENST00000506924 ZNF710Q8N1W2 664 aa14.52□□□□□ -0.09
CLCN3-205ENST00000506924 RIMS1Q86UR5 1692 aaKnown RBP14.51□□□□□ -0.09
CLCN3-205ENST00000506924 ADGBQ8N7X0 1667 aa14.51□□□□□ -0.09
CLCN3-205ENST00000506924 REREQ9P2R6 1566 aa14.51□□□□□ -0.09
CLCN3-205ENST00000506924 DAPK1P53355 1430 aa14.5□□□□□ -0.09
CLCN3-205ENST00000506924 ITGAEP38570 1179 aa14.5□□□□□ -0.09
CLCN3-205ENST00000506924 DNMT1P26358 1616 aaKnown RBP14.49□□□□□ -0.09
CLCN3-205ENST00000506924 GPR153Q6NV75 609 aa14.49□□□□□ -0.09
CLCN3-205ENST00000506924 GGT6Q6P531 493 aa14.49□□□□□ -0.09
CLCN3-205ENST00000506924 RRP7BPQ9NSQ0 103 aa14.49□□□□□ -0.09
CLCN3-205ENST00000506924 CROCC2H7BZ55 1655 aa14.49□□□□□ -0.09
CLCN3-205ENST00000506924 FER1L4A9Z1Z3 1794 aa14.48□□□□□ -0.09
CLCN3-205ENST00000506924 AGLP35573 1532 aa14.48□□□□□ -0.09
CLCN3-205ENST00000506924 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.48□□□□□ -0.09
CLCN3-205ENST00000506924 PTPRMP28827 1452 aa14.48□□□□□ -0.09
CLCN3-205ENST00000506924 DHX29Q7Z478 1369 aaKnown RBP14.47□□□□□ -0.09
CLCN3-205ENST00000506924 PLXNC1O60486 1568 aa14.47□□□□□ -0.09
CLCN3-205ENST00000506924 MAST1Q9Y2H9 1570 aa14.47□□□□□ -0.09
CLCN3-205ENST00000506924 KIF3BO15066 747 aa14.46□□□□□ -0.09
CLCN3-205ENST00000506924 CEBPAP49715 358 aaPredicted RBP14.46□□□□□ -0.09
CLCN3-205ENST00000506924 ESF1Q9H501 851 aaKnown RBP14.45□□□□□ -0.1
CLCN3-205ENST00000506924 HOXB1P14653 301 aaPredicted RBP14.44□□□□□ -0.1
CLCN3-205ENST00000506924 MLLT3P42568 568 aaPredicted RBP14.44□□□□□ -0.1
CLCN3-205ENST00000506924 SHANK2Q9UPX8 1470 aa14.44□□□□□ -0.1
CLCN3-205ENST00000506924 PTPRKQ15262 1439 aa14.43□□□□□ -0.1
CLCN3-205ENST00000506924 ARSIQ5FYB1 569 aa14.43□□□□□ -0.1
CLCN3-205ENST00000506924 KIF15Q9NS87 1388 aa14.43□□□□□ -0.1
CLCN3-205ENST00000506924 LMOD2Q6P5Q4 547 aa14.42□□□□□ -0.1
CLCN3-205ENST00000506924 PHF14O94880 888 aa14.41□□□□□ -0.1
CLCN3-205ENST00000506924 EPAS1Q99814 870 aa14.41□□□□□ -0.1
CLCN3-205ENST00000506924 ANKRD30AQ9BXX3 1397 aa14.41□□□□□ -0.1
CLCN3-205ENST00000506924 DUOX2Q9NRD8 1548 aa14.4□□□□□ -0.1
CLCN3-205ENST00000506924 CLTCQ00610 1675 aaKnown RBP14.39□□□□□ -0.11
CLCN3-205ENST00000506924 PSDA5PKW4 1024 aaPredicted RBP14.39□□□□□ -0.11
CLCN3-205ENST00000506924 NUDT7P0C024 238 aa14.39□□□□□ -0.11
CLCN3-205ENST00000506924 NCOA1Q15788 1441 aa14.39□□□□□ -0.11
CLCN3-205ENST00000506924 RRBP1Q9P2E9 1410 aaKnown RBP14.39□□□□□ -0.11
CLCN3-205ENST00000506924 GRXCR2A6NFK2 248 aa14.37□□□□□ -0.11
CLCN3-205ENST00000506924 C3P01024 1663 aa14.36□□□□□ -0.11
CLCN3-205ENST00000506924 OSBPP22059 807 aa14.36□□□□□ -0.11
CLCN3-205ENST00000506924 ADGRL2O95490 1459 aa14.36□□□□□ -0.11
CLCN3-205ENST00000506924 WASHC2CQ9Y4E1 1318 aa14.36□□□□□ -0.11
CLCN3-205ENST00000506924 ZMYM3Q14202 1370 aa14.35□□□□□ -0.11
CLCN3-205ENST00000506924 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLCN3-205ENST00000506924 DDX12PQ92771 950 aa14.35□□□□□ -0.11
CLCN3-205ENST00000506924 FBXW7Q969H0 707 aa14.35□□□□□ -0.11
CLCN3-205ENST00000506924 CNTLNQ9NXG0 1405 aa14.34□□□□□ -0.11
CLCN3-205ENST00000506924 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
CLCN3-205ENST00000506924 EIF2AK4Q9P2K8 1649 aaKnown RBP14.33□□□□□ -0.11
CLCN3-205ENST00000506924 ERBINQ96RT1 1412 aa14.33□□□□□ -0.11
CLCN3-205ENST00000506924 FOSBP53539 338 aa14.33□□□□□ -0.12
CLCN3-205ENST00000506924 TYW1BQ6NUM6 668 aa14.33□□□□□ -0.12
CLCN3-205ENST00000506924 RNF17Q9BXT8 1623 aaKnown RBP14.33□□□□□ -0.12
CLCN3-205ENST00000506924 MROH1Q8NDA8 1641 aa14.32□□□□□ -0.12
CLCN3-205ENST00000506924 ANKRD50Q9ULJ7 1429 aa14.32□□□□□ -0.12
CLCN3-205ENST00000506924 KDM5DQ9BY66 1539 aa14.31□□□□□ -0.12
CLCN3-205ENST00000506924 MROH2AA6NES4 1674 aa14.31□□□□□ -0.12
CLCN3-205ENST00000506924 PCDHGA10Q9Y5H3 936 aa14.31□□□□□ -0.12
CLCN3-205ENST00000506924 CEP152O94986 1710 aa14.3□□□□□ -0.12
CLCN3-205ENST00000506924 HSPA2P54652 639 aa14.3□□□□□ -0.12
CLCN3-205ENST00000506924 FBXO31Q5XUX0 539 aaPredicted RBP14.3□□□□□ -0.12
CLCN3-205ENST00000506924 ROCK1Q13464 1354 aa14.3□□□□□ -0.12
CLCN3-205ENST00000506924 EN1Q05925 392 aaPredicted RBP14.29□□□□□ -0.12
CLCN3-205ENST00000506924 LHX6Q9UPM6 363 aa14.29□□□□□ -0.12
CLCN3-205ENST00000506924 ABCC3O15438 1527 aa14.29□□□□□ -0.12
CLCN3-205ENST00000506924 ST18O60284 1047 aa14.28□□□□□ -0.12
CLCN3-205ENST00000506924 RBM26Q5T8P6 1007 aaKnown RBP14.28□□□□□ -0.12
CLCN3-205ENST00000506924 LMTK3Q96Q04 1460 aa14.27□□□□□ -0.12
CLCN3-205ENST00000506924 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.13
CLCN3-205ENST00000506924 ZDHHC16Q969W1 377 aa14.27□□□□□ -0.13
CLCN3-205ENST00000506924 DEPDC5O75140 1603 aa14.26□□□□□ -0.13
CLCN3-205ENST00000506924 PRDM15P57071 1507 aaPredicted RBP14.26□□□□□ -0.13
CLCN3-205ENST00000506924 KANK1Q14678 1352 aa14.26□□□□□ -0.13
CLCN3-205ENST00000506924 CFAP65Q6ZU64 1925 aaKnown RBP14.26□□□□□ -0.13
CLCN3-205ENST00000506924 GPIHBP1Q8IV16 184 aa14.26□□□□□ -0.13
CLCN3-205ENST00000506924 ZNF454Q8N9F8 522 aa14.26□□□□□ -0.13
CLCN3-205ENST00000506924 PPP4R3BQ5MIZ7 849 aa14.25□□□□□ -0.13
CLCN3-205ENST00000506924 PREX1Q8TCU6 1659 aa14.25□□□□□ -0.13
CLCN3-205ENST00000506924 UHRF1BP1Q6BDS2 1440 aa14.24□□□□□ -0.13
CLCN3-205ENST00000506924 ZC3H13Q5T200 1668 aaKnown RBP14.24□□□□□ -0.13
CLCN3-205ENST00000506924 CAMSAP1Q5T5Y3 1602 aa14.24□□□□□ -0.13
CLCN3-205ENST00000506924 PZPP20742 1482 aa14.24□□□□□ -0.13
CLCN3-205ENST00000506924 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
CLCN3-205ENST00000506924 FAM135AQ9P2D6 1515 aa14.23□□□□□ -0.13
CLCN3-205ENST00000506924 SETD1BQ9UPS6 1966 aaKnown RBP14.23□□□□□ -0.13
CLCN3-205ENST00000506924 NAIPQ13075 1403 aa14.23□□□□□ -0.13
CLCN3-205ENST00000506924 NPATQ14207 1427 aa14.23□□□□□ -0.13
CLCN3-205ENST00000506924 TNRQ92752 1358 aa14.22□□□□□ -0.13
CLCN3-205ENST00000506924 VWDEQ8N2E2 1590 aa14.21□□□□□ -0.14
CLCN3-205ENST00000506924 MYO3AQ8NEV4 1616 aa14.2□□□□□ -0.14
CLCN3-205ENST00000506924 MAP3K7O43318 606 aa14.2□□□□□ -0.14
CLCN3-205ENST00000506924 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
CLCN3-205ENST00000506924 UNC13BO14795 1591 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms