RNA–Protein interactions for RNA: ENST00000506832.6

GPATCH4-211, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-211ENST00000506832 PNPLA6Q8IY17 1366 aa18.89■□□□□ 0.61
GPATCH4-211ENST00000506832 PRAG1Q86YV5 1406 aa18.89■□□□□ 0.61
GPATCH4-211ENST00000506832 ESCO1Q5FWF5 840 aa18.88■□□□□ 0.61
GPATCH4-211ENST00000506832 CFAP70Q5T0N1 1121 aa18.88■□□□□ 0.61
GPATCH4-211ENST00000506832 LRRC59Q96AG4 307 aaKnown RBP18.88■□□□□ 0.61
GPATCH4-211ENST00000506832 C8orf37Q96NL8 207 aa18.88■□□□□ 0.61
GPATCH4-211ENST00000506832 YTHDC2Q9H6S0 1430 aaKnown RBP18.88■□□□□ 0.61
GPATCH4-211ENST00000506832 KNDC1Q76NI1 1749 aa18.88■□□□□ 0.61
GPATCH4-211ENST00000506832 ADAMTS2O95450 1211 aa18.87■□□□□ 0.61
GPATCH4-211ENST00000506832 KDM2AQ9Y2K7 1162 aa18.87■□□□□ 0.61
GPATCH4-211ENST00000506832 MYOM2P54296 1465 aa18.86■□□□□ 0.61
GPATCH4-211ENST00000506832 AFF2P51816 1311 aa18.85■□□□□ 0.61
GPATCH4-211ENST00000506832 TECPR2O15040 1411 aa18.84■□□□□ 0.61
GPATCH4-211ENST00000506832 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
GPATCH4-211ENST00000506832 LAMC1P11047 1609 aa18.84■□□□□ 0.61
GPATCH4-211ENST00000506832 PLEKHG5O94827 1062 aa18.83■□□□□ 0.6
GPATCH4-211ENST00000506832 ZNF772Q68DY9 489 aaPredicted RBP18.83■□□□□ 0.6
GPATCH4-211ENST00000506832 ABCC11Q96J66 1382 aa18.82■□□□□ 0.6
GPATCH4-211ENST00000506832 NRXN1Q9ULB1 1477 aa18.82■□□□□ 0.6
GPATCH4-211ENST00000506832 FMN2Q9NZ56 1722 aa18.81■□□□□ 0.6
GPATCH4-211ENST00000506832 FOXO3O43524 673 aa18.81■□□□□ 0.6
GPATCH4-211ENST00000506832 DCAF11Q8TEB1 546 aa18.81■□□□□ 0.6
GPATCH4-211ENST00000506832 C14orf93Q9H972 538 aaKnown RBP18.81■□□□□ 0.6
GPATCH4-211ENST00000506832 DHX57Q6P158 1386 aaKnown RBP18.81■□□□□ 0.6
GPATCH4-211ENST00000506832 PRAM1Q96QH2 718 aa18.8■□□□□ 0.6
GPATCH4-211ENST00000506832 SOS2Q07890 1332 aaPredicted RBP18.79■□□□□ 0.6
GPATCH4-211ENST00000506832 NPHP3Q7Z494 1330 aa18.78■□□□□ 0.6
GPATCH4-211ENST00000506832 POGKQ9P215 609 aa18.78■□□□□ 0.6
GPATCH4-211ENST00000506832 TRAK1Q9UPV9 953 aa18.78■□□□□ 0.6
GPATCH4-211ENST00000506832 RXRBP28702 533 aa18.77■□□□□ 0.6
GPATCH4-211ENST00000506832 NGLY1Q96IV0 654 aa18.77■□□□□ 0.6
GPATCH4-211ENST00000506832 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.6
GPATCH4-211ENST00000506832 PXDNQ92626 1479 aa18.77■□□□□ 0.59
GPATCH4-211ENST00000506832 RGPD8O14715 1765 aaPredicted RBP18.75■□□□□ 0.59
GPATCH4-211ENST00000506832 MINK1Q8N4C8 1332 aaPredicted RBP18.74■□□□□ 0.59
GPATCH4-211ENST00000506832 KIF1AQ12756 1690 aa18.73■□□□□ 0.59
GPATCH4-211ENST00000506832 ADGRB1O14514 1584 aa18.73■□□□□ 0.59
GPATCH4-211ENST00000506832 QTRT2Q9H974 415 aaKnown RBP18.72■□□□□ 0.59
GPATCH4-211ENST00000506832 COL22A1Q8NFW1 1626 aaPredicted RBP18.71■□□□□ 0.59
GPATCH4-211ENST00000506832 LMOD2Q6P5Q4 547 aa18.71■□□□□ 0.59
GPATCH4-211ENST00000506832 DLC1Q96QB1 1528 aa18.7■□□□□ 0.58
GPATCH4-211ENST00000506832 RGS12O14924 1447 aa18.7■□□□□ 0.58
GPATCH4-211ENST00000506832 PMFBP1Q8TBY8 1022 aa18.7■□□□□ 0.58
GPATCH4-211ENST00000506832 USP21Q9UK80 565 aa18.7■□□□□ 0.58
GPATCH4-211ENST00000506832 PHF8Q9UPP1 1060 aa18.7■□□□□ 0.58
GPATCH4-211ENST00000506832 HAP1P54257 671 aaPredicted RBP18.69■□□□□ 0.58
GPATCH4-211ENST00000506832 KRT28Q7Z3Y7 464 aa18.69■□□□□ 0.58
GPATCH4-211ENST00000506832 USP32Q8NFA0 1604 aa18.67■□□□□ 0.58
GPATCH4-211ENST00000506832 HRCP23327 699 aa18.66■□□□□ 0.58
GPATCH4-211ENST00000506832 SIRT1Q96EB6 747 aa18.66■□□□□ 0.58
GPATCH4-211ENST00000506832 ADGRB2O60241 1585 aa18.65■□□□□ 0.58
GPATCH4-211ENST00000506832 RBM6P78332 1123 aaKnown RBP18.65■□□□□ 0.58
GPATCH4-211ENST00000506832 CABLES1Q8TDN4 633 aa18.65■□□□□ 0.58
GPATCH4-211ENST00000506832 SPATA31A3Q5VYP0 1347 aa18.65■□□□□ 0.58
GPATCH4-211ENST00000506832 ARHGEF28Q8N1W1 1705 aaKnown RBP18.65■□□□□ 0.58
GPATCH4-211ENST00000506832 TNS3Q68CZ2 1445 aa18.65■□□□□ 0.58
GPATCH4-211ENST00000506832 MARF1Q9Y4F3 1742 aaKnown RBP18.64■□□□□ 0.57
GPATCH4-211ENST00000506832 PSME1Q06323 249 aa18.64■□□□□ 0.57
GPATCH4-211ENST00000506832 UPF1Q92900 1129 aaKnown RBP eCLIP18.62■□□□□ 0.57
GPATCH4-211ENST00000506832 TRPC5Q9UL62 973 aaPredicted RBP18.62■□□□□ 0.57
GPATCH4-211ENST00000506832 PRR36Q9H6K5 1346 aa18.62■□□□□ 0.57
GPATCH4-211ENST00000506832 CDK12Q9NYV4 1490 aaPredicted RBP18.62■□□□□ 0.57
GPATCH4-211ENST00000506832 TULP4Q9NRJ4 1543 aa18.61■□□□□ 0.57
GPATCH4-211ENST00000506832 ANKARQ7Z5J8 1434 aa18.61■□□□□ 0.57
GPATCH4-211ENST00000506832 ATRNO75882 1429 aa18.59■□□□□ 0.57
GPATCH4-211ENST00000506832 ABCA3Q99758 1704 aa18.58■□□□□ 0.57
GPATCH4-211ENST00000506832 WASLO00401 505 aaPredicted RBP18.58■□□□□ 0.56
GPATCH4-211ENST00000506832 FNBP4Q8N3X1 1017 aaPredicted RBP18.58■□□□□ 0.56
GPATCH4-211ENST00000506832 BCL9LQ86UU0 1499 aa18.58■□□□□ 0.56
GPATCH4-211ENST00000506832 EIF3AQ14152 1382 aaKnown RBP18.57■□□□□ 0.56
GPATCH4-211ENST00000506832 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
GPATCH4-211ENST00000506832 NEUROD1Q13562 356 aa18.57■□□□□ 0.56
GPATCH4-211ENST00000506832 NBPF1Q3BBV0 1214 aa18.57■□□□□ 0.56
GPATCH4-211ENST00000506832 SIN3AQ96ST3 1273 aa18.57■□□□□ 0.56
GPATCH4-211ENST00000506832 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
GPATCH4-211ENST00000506832 NGDNQ8NEJ9 315 aaKnown RBP18.56■□□□□ 0.56
GPATCH4-211ENST00000506832 CCDC9Q9Y3X0 531 aaKnown RBP18.56■□□□□ 0.56
GPATCH4-211ENST00000506832 PLCH1Q4KWH8 1693 aa18.55■□□□□ 0.56
GPATCH4-211ENST00000506832 SBNO1A3KN83 1393 aa18.55■□□□□ 0.56
GPATCH4-211ENST00000506832 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
GPATCH4-211ENST00000506832 TRPM3Q9HCF6 1732 aaPredicted RBP18.54■□□□□ 0.56
GPATCH4-211ENST00000506832 ATP7BP35670 1465 aa18.54■□□□□ 0.56
GPATCH4-211ENST00000506832 STAC3Q96MF2 364 aa18.54■□□□□ 0.56
GPATCH4-211ENST00000506832 ITSN1Q15811 1721 aa18.53■□□□□ 0.56
GPATCH4-211ENST00000506832 KIAA1210Q9ULL0 1709 aa18.53■□□□□ 0.56
GPATCH4-211ENST00000506832 NUDT16Q96DE0 195 aaKnown RBP18.52■□□□□ 0.56
GPATCH4-211ENST00000506832 RALGAPBQ86X10 1494 aa18.52■□□□□ 0.55
GPATCH4-211ENST00000506832 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.52■□□□□ 0.55
GPATCH4-211ENST00000506832 SLIT2O94813 1529 aa18.51■□□□□ 0.55
GPATCH4-211ENST00000506832 UNC5CLQ8IV45 518 aa18.51■□□□□ 0.55
GPATCH4-211ENST00000506832 L3MBTL2Q969R5 705 aa18.51■□□□□ 0.55
GPATCH4-211ENST00000506832 GJD4Q96KN9 370 aaPredicted RBP18.51■□□□□ 0.55
GPATCH4-211ENST00000506832 CDK19Q9BWU1 502 aa18.51■□□□□ 0.55
GPATCH4-211ENST00000506832 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
GPATCH4-211ENST00000506832 GLI3P10071 1580 aa18.51■□□□□ 0.55
GPATCH4-211ENST00000506832 A0A0G2JS52 829 aa18.5■□□□□ 0.55
GPATCH4-211ENST00000506832 MYT1Q01538 1121 aa18.5■□□□□ 0.55
GPATCH4-211ENST00000506832 NUTM2GQ5VZR2 741 aa18.5■□□□□ 0.55
GPATCH4-211ENST00000506832 ALS2Q96Q42 1657 aa18.5■□□□□ 0.55
GPATCH4-211ENST00000506832 QRICH2Q9H0J4 1663 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms