RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 BEGAINQ9BUH8 593 aa10.21□□□□□ -0.77
TRIO-208ENST00000506611 FCF1Q9Y324 198 aaKnown RBP10.21□□□□□ -0.77
TRIO-208ENST00000506611 MOXD2PA6NHM9 499 aa10.2□□□□□ -0.78
TRIO-208ENST00000506611 Q3C1V9 767 aa10.2□□□□□ -0.78
TRIO-208ENST00000506611 SPRYD7Q5W111 196 aa10.2□□□□□ -0.78
TRIO-208ENST00000506611 USB1Q9BQ65 265 aaKnown RBP10.19□□□□□ -0.78
TRIO-208ENST00000506611 LCE2BO14633 110 aa10.18□□□□□ -0.78
TRIO-208ENST00000506611 MMP16P51512 607 aa10.18□□□□□ -0.78
TRIO-208ENST00000506611 GFRA3O60609 400 aa10.17□□□□□ -0.78
TRIO-208ENST00000506611 DXOO77932 396 aaKnown RBP10.16□□□□□ -0.78
TRIO-208ENST00000506611 FDX1P10109 184 aa10.16□□□□□ -0.78
TRIO-208ENST00000506611 TBC1D2Q9BYX2 928 aa10.16□□□□□ -0.78
TRIO-208ENST00000506611 ZNF598Q86UK7 904 aaKnown RBP10.15□□□□□ -0.78
TRIO-208ENST00000506611 PDZRN3Q9UPQ7 1066 aa10.14□□□□□ -0.79
TRIO-208ENST00000506611 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
TRIO-208ENST00000506611 NRG2O14511 850 aaPredicted RBP10.12□□□□□ -0.79
TRIO-208ENST00000506611 GDF9O60383 454 aa10.11□□□□□ -0.79
TRIO-208ENST00000506611 RSBN1LQ6PCB5 846 aaPredicted RBP10.11□□□□□ -0.79
TRIO-208ENST00000506611 RETREG3Q86VR2 466 aa10.11□□□□□ -0.79
TRIO-208ENST00000506611 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
TRIO-208ENST00000506611 C6orf229H3BNL8 230 aa10.1□□□□□ -0.79
TRIO-208ENST00000506611 RPIAP49247 311 aa10.1□□□□□ -0.79
TRIO-208ENST00000506611 Q6ZNB5 142 aa10.1□□□□□ -0.79
TRIO-208ENST00000506611 PKD2L1Q9P0L9 805 aa10.1□□□□□ -0.79
TRIO-208ENST00000506611 JUNDP17535 347 aa10.09□□□□□ -0.79
TRIO-208ENST00000506611 LAPTM4AQ15012 233 aa10.09□□□□□ -0.79
TRIO-208ENST00000506611 GPBP1L1Q9HC44 474 aaPredicted RBP10.09□□□□□ -0.79
TRIO-208ENST00000506611 TNFRSF10AO00220 468 aa10.08□□□□□ -0.8
TRIO-208ENST00000506611 SPTLC1O15269 473 aa10.08□□□□□ -0.8
TRIO-208ENST00000506611 MYSM1Q5VVJ2 828 aa10.08□□□□□ -0.8
TRIO-208ENST00000506611 GJA5P36382 358 aa10.07□□□□□ -0.8
TRIO-208ENST00000506611 PRR20EP86478 221 aa10.07□□□□□ -0.8
TRIO-208ENST00000506611 PRR20CP86479 221 aa10.07□□□□□ -0.8
TRIO-208ENST00000506611 PRR20DP86480 221 aa10.07□□□□□ -0.8
TRIO-208ENST00000506611 PRR20BP86481 221 aa10.07□□□□□ -0.8
TRIO-208ENST00000506611 PRR20AP86496 221 aa10.07□□□□□ -0.8
TRIO-208ENST00000506611 LIMD1Q9UGP4 676 aa10.07□□□□□ -0.8
TRIO-208ENST00000506611 MTMR2Q13614 643 aa10.06□□□□□ -0.8
TRIO-208ENST00000506611 RIC3Q7Z5B4 369 aa10.06□□□□□ -0.8
TRIO-208ENST00000506611 PTCRAQ6ISU1 281 aaPredicted RBP10.05□□□□□ -0.8
TRIO-208ENST00000506611 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
TRIO-208ENST00000506611 CFAP99D6REC4 459 aa10.04□□□□□ -0.8
TRIO-208ENST00000506611 HRCP23327 699 aa10.04□□□□□ -0.8
TRIO-208ENST00000506611 FOXC1Q12948 553 aa10.04□□□□□ -0.8
TRIO-208ENST00000506611 TRIM32Q13049 653 aa10.04□□□□□ -0.8
TRIO-208ENST00000506611 DIXDC1Q155Q3 683 aa10.04□□□□□ -0.8
TRIO-208ENST00000506611 CCDC24Q8N4L8 307 aa10.04□□□□□ -0.8
TRIO-208ENST00000506611 CABLES1Q8TDN4 633 aa10.04□□□□□ -0.8
TRIO-208ENST00000506611 KDM4CQ9H3R0 1056 aa10.04□□□□□ -0.8
TRIO-208ENST00000506611 QPCTQ16769 361 aa10.03□□□□□ -0.8
TRIO-208ENST00000506611 CD2BP2O95400 341 aaKnown RBP10.02□□□□□ -0.81
TRIO-208ENST00000506611 CSPP1Q1MSJ5 1256 aa10.02□□□□□ -0.81
TRIO-208ENST00000506611 NUDT12Q9BQG2 462 aa10.02□□□□□ -0.81
TRIO-208ENST00000506611 FAM117AQ9C073 453 aa10.02□□□□□ -0.81
TRIO-208ENST00000506611 SKOR1P84550 965 aa10.01□□□□□ -0.81
TRIO-208ENST00000506611 PLEKHG3A1L390 1219 aa10□□□□□ -0.81
TRIO-208ENST00000506611 ZBTB24O43167 697 aaPredicted RBP10□□□□□ -0.81
TRIO-208ENST00000506611 SPDYE5A6NIY4 337 aa9.99□□□□□ -0.81
TRIO-208ENST00000506611 PTPRNQ16849 979 aa9.99□□□□□ -0.81
TRIO-208ENST00000506611 FBXO31Q5XUX0 539 aaPredicted RBP9.99□□□□□ -0.81
TRIO-208ENST00000506611 DESI1Q6ICB0 168 aa9.99□□□□□ -0.81
TRIO-208ENST00000506611 TRAF7Q6Q0C0 670 aa9.99□□□□□ -0.81
TRIO-208ENST00000506611 ZBTB3Q9H5J0 574 aa9.99□□□□□ -0.81
TRIO-208ENST00000506611 CCNYL3P0C7X3 344 aa9.98□□□□□ -0.81
TRIO-208ENST00000506611 PRPF38BQ5VTL8 546 aaKnown RBP9.98□□□□□ -0.81
TRIO-208ENST00000506611 TOR4AQ9NXH8 423 aa9.98□□□□□ -0.81
TRIO-208ENST00000506611 LILRB3O75022 631 aa9.97□□□□□ -0.81
TRIO-208ENST00000506611 TUSC1Q2TAM9 212 aa9.97□□□□□ -0.81
TRIO-208ENST00000506611 POLR3EQ9NVU0 708 aa9.97□□□□□ -0.81
TRIO-208ENST00000506611 WNT7AO00755 349 aa9.96□□□□□ -0.82
TRIO-208ENST00000506611 CLK2P49760 499 aaKnown RBP9.96□□□□□ -0.82
TRIO-208ENST00000506611 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
TRIO-208ENST00000506611 EVA1BQ9NVM1 165 aa9.96□□□□□ -0.82
TRIO-208ENST00000506611 FAM187AA6NFU0 413 aa9.95□□□□□ -0.82
TRIO-208ENST00000506611 PER1O15534 1290 aaPredicted RBP9.95□□□□□ -0.82
TRIO-208ENST00000506611 MYT1Q01538 1121 aa9.95□□□□□ -0.82
TRIO-208ENST00000506611 LYPD8Q6UX82 237 aa9.95□□□□□ -0.82
TRIO-208ENST00000506611 MRGPRX2Q96LB1 330 aa9.95□□□□□ -0.82
TRIO-208ENST00000506611 DGAT1O75907 488 aa9.94□□□□□ -0.82
TRIO-208ENST00000506611 UNC93B1Q9H1C4 597 aa9.94□□□□□ -0.82
TRIO-208ENST00000506611 KCNH2Q12809 1159 aa9.93□□□□□ -0.82
TRIO-208ENST00000506611 PKDCCQ504Y2 493 aa9.93□□□□□ -0.82
TRIO-208ENST00000506611 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
TRIO-208ENST00000506611 F12P00748 615 aaPredicted RBP9.92□□□□□ -0.82
TRIO-208ENST00000506611 WNT7BP56706 349 aa9.92□□□□□ -0.82
TRIO-208ENST00000506611 RC3H1Q5TC82 1133 aaKnown RBP9.92□□□□□ -0.82
TRIO-208ENST00000506611 RSPH6AQ9H0K4 717 aa9.92□□□□□ -0.82
TRIO-208ENST00000506611 MAP10Q9P2G4 905 aa9.92□□□□□ -0.82
TRIO-208ENST00000506611 SH3BP2P78314 561 aa9.91□□□□□ -0.82
TRIO-208ENST00000506611 TPRNQ4KMQ1 711 aa9.91□□□□□ -0.82
TRIO-208ENST00000506611 SH3D19Q5HYK7 790 aa9.91□□□□□ -0.82
TRIO-208ENST00000506611 CYP4X1Q8N118 509 aa9.91□□□□□ -0.82
TRIO-208ENST00000506611 DDRGK1Q96HY6 314 aa9.91□□□□□ -0.82
TRIO-208ENST00000506611 NUTM2BA6NNL0 878 aaPredicted RBP9.9□□□□□ -0.82
TRIO-208ENST00000506611 NUTM2EB1AL46 878 aaPredicted RBP9.9□□□□□ -0.82
TRIO-208ENST00000506611 NUTM2DQ5VT03 806 aaPredicted RBP9.9□□□□□ -0.82
TRIO-208ENST00000506611 NUTM2AQ8IVF1 878 aaPredicted RBP9.9□□□□□ -0.82
TRIO-208ENST00000506611 BAP1Q92560 729 aa9.9□□□□□ -0.82
TRIO-208ENST00000506611 J3QL48 77 aa9.89□□□□□ -0.83
TRIO-208ENST00000506611 ST8SIA5O15466 376 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms