RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 SAFB2Q14151 953 aaKnown RBP eCLIP15.72■□□□□ 0.11
TRIM23-205ENST00000506400 C14orf37Q86TY3 774 aa15.71■□□□□ 0.11
TRIM23-205ENST00000506400 RBM33Q96EV2 1170 aaKnown RBP15.7■□□□□ 0.1
TRIM23-205ENST00000506400 MINK1Q8N4C8 1332 aaPredicted RBP15.69■□□□□ 0.1
TRIM23-205ENST00000506400 ADGRL3Q9HAR2 1447 aa15.69■□□□□ 0.1
TRIM23-205ENST00000506400 C19orf44Q9H6X5 657 aa15.69■□□□□ 0.1
TRIM23-205ENST00000506400 QRICH2Q9H0J4 1663 aa15.68■□□□□ 0.1
TRIM23-205ENST00000506400 MSH6P52701 1360 aa15.68■□□□□ 0.1
TRIM23-205ENST00000506400 TESK2Q96S53 571 aa15.68■□□□□ 0.1
TRIM23-205ENST00000506400 EVC2Q86UK5 1308 aa15.68■□□□□ 0.1
TRIM23-205ENST00000506400 TMF1P82094 1093 aa15.67■□□□□ 0.1
TRIM23-205ENST00000506400 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.67■□□□□ 0.1
TRIM23-205ENST00000506400 ADGRB2O60241 1585 aa15.66■□□□□ 0.1
TRIM23-205ENST00000506400 WASLO00401 505 aaPredicted RBP15.66■□□□□ 0.1
TRIM23-205ENST00000506400 HIRIP3Q9BW71 556 aaPredicted RBP15.66■□□□□ 0.1
TRIM23-205ENST00000506400 DCCP43146 1447 aa15.66■□□□□ 0.1
TRIM23-205ENST00000506400 ATF3P18847 181 aa15.65■□□□□ 0.1
TRIM23-205ENST00000506400 CDCA8Q53HL2 280 aa15.65■□□□□ 0.1
TRIM23-205ENST00000506400 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
TRIM23-205ENST00000506400 CDC42BPGQ6DT37 1551 aa15.64■□□□□ 0.09
TRIM23-205ENST00000506400 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.09
TRIM23-205ENST00000506400 NALCNQ8IZF0 1738 aa15.64■□□□□ 0.09
TRIM23-205ENST00000506400 PUS7Q96PZ0 661 aaKnown RBP15.64■□□□□ 0.09
TRIM23-205ENST00000506400 CERKQ8TCT0 537 aa15.63■□□□□ 0.09
TRIM23-205ENST00000506400 CDK19Q9BWU1 502 aa15.63■□□□□ 0.09
TRIM23-205ENST00000506400 SRPK2P78362 688 aaKnown RBP15.62■□□□□ 0.09
TRIM23-205ENST00000506400 TULP4Q9NRJ4 1543 aa15.62■□□□□ 0.09
TRIM23-205ENST00000506400 XIRP1Q702N8 1843 aaKnown RBP15.61■□□□□ 0.09
TRIM23-205ENST00000506400 DISP3Q9P2K9 1392 aa15.6■□□□□ 0.09
TRIM23-205ENST00000506400 ANKARQ7Z5J8 1434 aa15.6■□□□□ 0.09
TRIM23-205ENST00000506400 CABP2Q9NPB3 220 aa15.59■□□□□ 0.09
TRIM23-205ENST00000506400 ATAD2Q6PL18 1390 aa15.59■□□□□ 0.09
TRIM23-205ENST00000506400 NUDT16Q96DE0 195 aaKnown RBP15.58■□□□□ 0.08
TRIM23-205ENST00000506400 FMN2Q9NZ56 1722 aa15.57■□□□□ 0.08
TRIM23-205ENST00000506400 TOM1O60784 492 aa15.57■□□□□ 0.08
TRIM23-205ENST00000506400 CCDC61Q9Y6R9 512 aa15.57■□□□□ 0.08
TRIM23-205ENST00000506400 NUTM2FA1L443 756 aa15.56■□□□□ 0.08
TRIM23-205ENST00000506400 ZNF316A6NFI3 1004 aaPredicted RBP15.56■□□□□ 0.08
TRIM23-205ENST00000506400 C11orf95C9JLR9 678 aaPredicted RBP15.56■□□□□ 0.08
TRIM23-205ENST00000506400 SLAIN2Q9P270 581 aa15.56■□□□□ 0.08
TRIM23-205ENST00000506400 MST1RQ04912 1400 aa15.56■□□□□ 0.08
TRIM23-205ENST00000506400 ATP7BP35670 1465 aa15.55■□□□□ 0.08
TRIM23-205ENST00000506400 C1orf167Q5SNV9 1468 aa15.55■□□□□ 0.08
TRIM23-205ENST00000506400 PRR36Q9H6K5 1346 aa15.55■□□□□ 0.08
TRIM23-205ENST00000506400 NINLQ9Y2I6 1382 aa15.54■□□□□ 0.08
TRIM23-205ENST00000506400 KIF7Q2M1P5 1343 aa15.54■□□□□ 0.08
TRIM23-205ENST00000506400 CCDC7Q96M83 1385 aa15.53■□□□□ 0.08
TRIM23-205ENST00000506400 UBAP1LF5GYI3 381 aa15.53■□□□□ 0.08
TRIM23-205ENST00000506400 ESCO1Q5FWF5 840 aa15.53■□□□□ 0.08
TRIM23-205ENST00000506400 POLR3GLQ9BT43 218 aa15.53■□□□□ 0.08
TRIM23-205ENST00000506400 WASHC2AQ641Q2 1341 aa15.52■□□□□ 0.08
TRIM23-205ENST00000506400 USP32Q8NFA0 1604 aa15.52■□□□□ 0.08
TRIM23-205ENST00000506400 PPIP5K1Q6PFW1 1433 aa15.51■□□□□ 0.07
TRIM23-205ENST00000506400 PLEKHG3A1L390 1219 aa15.51■□□□□ 0.07
TRIM23-205ENST00000506400 TMC1Q8TDI8 760 aa15.51■□□□□ 0.07
TRIM23-205ENST00000506400 CABP1Q9NZU7 370 aa15.51■□□□□ 0.07
TRIM23-205ENST00000506400 PHF8Q9UPP1 1060 aa15.51■□□□□ 0.07
TRIM23-205ENST00000506400 ORAI2Q96SN7 254 aa15.5■□□□□ 0.07
TRIM23-205ENST00000506400 ITSN1Q15811 1721 aa15.49■□□□□ 0.07
TRIM23-205ENST00000506400 SLC12A5Q9H2X9 1139 aa15.49■□□□□ 0.07
TRIM23-205ENST00000506400 TERF2IPQ9NYB0 399 aa15.49■□□□□ 0.07
TRIM23-205ENST00000506400 TOPAZ1Q8N9V7 1692 aa15.48■□□□□ 0.07
TRIM23-205ENST00000506400 BRINP3Q76B58 766 aa15.48■□□□□ 0.07
TRIM23-205ENST00000506400 HDGFL2Q7Z4V5 671 aaPredicted RBP15.48■□□□□ 0.07
TRIM23-205ENST00000506400 PMFBP1Q8TBY8 1022 aa15.48■□□□□ 0.07
TRIM23-205ENST00000506400 NGDNQ8NEJ9 315 aaKnown RBP15.47■□□□□ 0.07
TRIM23-205ENST00000506400 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
TRIM23-205ENST00000506400 KIF1AQ12756 1690 aa15.47■□□□□ 0.07
TRIM23-205ENST00000506400 POLR3AO14802 1390 aaPredicted RBP15.47■□□□□ 0.07
TRIM23-205ENST00000506400 ACEP12821 1306 aa15.46■□□□□ 0.07
TRIM23-205ENST00000506400 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
TRIM23-205ENST00000506400 PIP4K2BP78356 416 aa15.45■□□□□ 0.06
TRIM23-205ENST00000506400 ANKRD36BQ8N2N9 1353 aa15.45■□□□□ 0.06
TRIM23-205ENST00000506400 CPSF1Q10570 1443 aaKnown RBP15.44■□□□□ 0.06
TRIM23-205ENST00000506400 FOXO3O43524 673 aa15.44■□□□□ 0.06
TRIM23-205ENST00000506400 PSME1Q06323 249 aa15.44■□□□□ 0.06
TRIM23-205ENST00000506400 RGPD8O14715 1765 aaPredicted RBP15.44■□□□□ 0.06
TRIM23-205ENST00000506400 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
TRIM23-205ENST00000506400 BRD4O60885 1362 aaPredicted RBP15.43■□□□□ 0.06
TRIM23-205ENST00000506400 MYOM1P52179 1685 aa15.43■□□□□ 0.06
TRIM23-205ENST00000506400 ROBO1Q9Y6N7 1651 aa15.42■□□□□ 0.06
TRIM23-205ENST00000506400 CD163L1Q9NR16 1453 aa15.42■□□□□ 0.06
TRIM23-205ENST00000506400 A0A1W2PP64 1363 aa15.42■□□□□ 0.06
TRIM23-205ENST00000506400 KTN1Q86UP2 1357 aaKnown RBP15.42■□□□□ 0.06
TRIM23-205ENST00000506400 KRT28Q7Z3Y7 464 aa15.42■□□□□ 0.06
TRIM23-205ENST00000506400 PANK3Q9H999 370 aa15.42■□□□□ 0.06
TRIM23-205ENST00000506400 USP6P35125 1406 aa15.41■□□□□ 0.06
TRIM23-205ENST00000506400 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
TRIM23-205ENST00000506400 EDC4Q6P2E9 1401 aaKnown RBP15.4■□□□□ 0.06
TRIM23-205ENST00000506400 SOS2Q07890 1332 aaPredicted RBP15.39■□□□□ 0.05
TRIM23-205ENST00000506400 AHDC1Q5TGY3 1603 aaPredicted RBP15.39■□□□□ 0.05
TRIM23-205ENST00000506400 DDX17Q92841 729 aaKnown RBP15.38■□□□□ 0.05
TRIM23-205ENST00000506400 CARD14Q9BXL6 1004 aa15.38■□□□□ 0.05
TRIM23-205ENST00000506400 NHSL1Q5SYE7 1610 aa15.38■□□□□ 0.05
TRIM23-205ENST00000506400 TTC21AQ8NDW8 1320 aa15.38■□□□□ 0.05
TRIM23-205ENST00000506400 SBNO1A3KN83 1393 aa15.37■□□□□ 0.05
TRIM23-205ENST00000506400 AKAP12Q02952 1782 aa15.37■□□□□ 0.05
TRIM23-205ENST00000506400 SSH2Q76I76 1423 aa15.37■□□□□ 0.05
TRIM23-205ENST00000506400 KNSTRNQ9Y448 316 aa15.37■□□□□ 0.05
TRIM23-205ENST00000506400 PXDNQ92626 1479 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms