RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 TULP4Q9NRJ4 1543 aa25.67■■□□□ 1.7
SDHA-206ENST00000505555 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
SDHA-206ENST00000505555 ARHGEF28Q8N1W1 1705 aaKnown RBP25.66■■□□□ 1.7
SDHA-206ENST00000505555 MYO5BQ9ULV0 1848 aa25.66■■□□□ 1.7
SDHA-206ENST00000505555 DIP2BQ9P265 1576 aa25.66■■□□□ 1.7
SDHA-206ENST00000505555 POLR3AO14802 1390 aaPredicted RBP25.65■■□□□ 1.7
SDHA-206ENST00000505555 ZFYVE9O95405 1425 aa25.65■■□□□ 1.7
SDHA-206ENST00000505555 TMEM131LA2VDJ0 1609 aa25.64■■□□□ 1.7
SDHA-206ENST00000505555 CGNL1Q0VF96 1302 aa25.63■■□□□ 1.69
SDHA-206ENST00000505555 DMRT2Q9Y5R5 561 aa25.63■■□□□ 1.69
SDHA-206ENST00000505555 TRMT2AQ8IZ69 625 aaKnown RBP25.62■■□□□ 1.69
SDHA-206ENST00000505555 PUS7Q96PZ0 661 aaKnown RBP25.61■■□□□ 1.69
SDHA-206ENST00000505555 MTHFSP49914 203 aa25.6■■□□□ 1.69
SDHA-206ENST00000505555 STAG3Q9UJ98 1225 aa25.6■■□□□ 1.69
SDHA-206ENST00000505555 SRPK2P78362 688 aaKnown RBP25.59■■□□□ 1.69
SDHA-206ENST00000505555 MLECQ14165 292 aa25.59■■□□□ 1.69
SDHA-206ENST00000505555 ANKRD36BQ8N2N9 1353 aa25.59■■□□□ 1.69
SDHA-206ENST00000505555 PRAM1Q96QH2 718 aa25.59■■□□□ 1.69
SDHA-206ENST00000505555 MINK1Q8N4C8 1332 aaPredicted RBP25.58■■□□□ 1.69
SDHA-206ENST00000505555 NEUROD2Q15784 382 aa25.56■■□□□ 1.68
SDHA-206ENST00000505555 POGKQ9P215 609 aa25.56■■□□□ 1.68
SDHA-206ENST00000505555 E9PSI1 815 aa25.55■■□□□ 1.68
SDHA-206ENST00000505555 RRP7AQ9Y3A4 280 aaKnown RBP25.55■■□□□ 1.68
SDHA-206ENST00000505555 PTPRMP28827 1452 aa25.53■■□□□ 1.68
SDHA-206ENST00000505555 WWC1Q8IX03 1113 aa25.53■■□□□ 1.68
SDHA-206ENST00000505555 YTHDC2Q9H6S0 1430 aaKnown RBP25.53■■□□□ 1.68
SDHA-206ENST00000505555 SHPRHQ149N8 1683 aa25.53■■□□□ 1.68
SDHA-206ENST00000505555 USP32Q8NFA0 1604 aa25.53■■□□□ 1.68
SDHA-206ENST00000505555 NKTRP30414 1462 aaKnown RBP25.52■■□□□ 1.68
SDHA-206ENST00000505555 SKAP1Q86WV1 359 aa25.52■■□□□ 1.68
SDHA-206ENST00000505555 A0A1W2PP64 1363 aa25.52■■□□□ 1.68
SDHA-206ENST00000505555 BCAR3O75815 825 aa25.51■■□□□ 1.67
SDHA-206ENST00000505555 RUNDC1Q96C34 613 aa25.51■■□□□ 1.67
SDHA-206ENST00000505555 DNAJC5Q9H3Z4 198 aa25.51■■□□□ 1.67
SDHA-206ENST00000505555 TCP11L2Q8N4U5 519 aa25.49■■□□□ 1.67
SDHA-206ENST00000505555 NGEFQ8N5V2 710 aa25.49■■□□□ 1.67
SDHA-206ENST00000505555 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.49■■□□□ 1.67
SDHA-206ENST00000505555 CFAP53Q96M91 514 aa25.49■■□□□ 1.67
SDHA-206ENST00000505555 TCERG1O14776 1098 aaKnown RBP25.49■■□□□ 1.67
SDHA-206ENST00000505555 ALKQ9UM73 1620 aa25.48■■□□□ 1.67
SDHA-206ENST00000505555 GGNBP2Q9H3C7 697 aa25.48■■□□□ 1.67
SDHA-206ENST00000505555 CLTCQ00610 1675 aaKnown RBP25.48■■□□□ 1.67
SDHA-206ENST00000505555 PPP6R1Q9UPN7 881 aa25.48■■□□□ 1.67
SDHA-206ENST00000505555 ERICH6Q7L0X2 663 aa25.47■■□□□ 1.67
SDHA-206ENST00000505555 AGLP35573 1532 aa25.47■■□□□ 1.67
SDHA-206ENST00000505555 NSD2O96028 1365 aa25.47■■□□□ 1.67
SDHA-206ENST00000505555 REREQ9P2R6 1566 aa25.45■■□□□ 1.66
SDHA-206ENST00000505555 CDK19Q9BWU1 502 aa25.45■■□□□ 1.66
SDHA-206ENST00000505555 ABCC11Q96J66 1382 aa25.44■■□□□ 1.66
SDHA-206ENST00000505555 U2AF1L5P0DN76 240 aaPredicted RBP25.43■■□□□ 1.66
SDHA-206ENST00000505555 U2AF1Q01081 240 aaKnown RBP eCLIP25.43■■□□□ 1.66
SDHA-206ENST00000505555 ATAD2Q6PL18 1390 aa25.43■■□□□ 1.66
SDHA-206ENST00000505555 A2ML1A8K2U0 1454 aa25.43■■□□□ 1.66
SDHA-206ENST00000505555 WAPLQ7Z5K2 1190 aa25.43■■□□□ 1.66
SDHA-206ENST00000505555 TERF2IPQ9NYB0 399 aa25.43■■□□□ 1.66
SDHA-206ENST00000505555 NINLQ9Y2I6 1382 aa25.43■■□□□ 1.66
SDHA-206ENST00000505555 FYB1O15117 783 aa25.41■■□□□ 1.66
SDHA-206ENST00000505555 PDE4AP27815 886 aa25.41■■□□□ 1.66
SDHA-206ENST00000505555 CABP1Q9NZU7 370 aa25.41■■□□□ 1.66
SDHA-206ENST00000505555 KDM2BQ8NHM5 1336 aa25.4■■□□□ 1.66
SDHA-206ENST00000505555 IQSEC2Q5JU85 1478 aa25.4■■□□□ 1.66
SDHA-206ENST00000505555 CD163L1Q9NR16 1453 aa25.4■■□□□ 1.66
SDHA-206ENST00000505555 RIMS2Q9UQ26 1411 aa25.4■■□□□ 1.66
SDHA-206ENST00000505555 PHF23Q9BUL5 403 aaPredicted RBP25.39■■□□□ 1.65
SDHA-206ENST00000505555 ANP32AP39687 249 aaKnown RBP25.38■■□□□ 1.65
SDHA-206ENST00000505555 SPATA31D1Q6ZQQ2 1576 aa25.38■■□□□ 1.65
SDHA-206ENST00000505555 MS4A1P11836 297 aa25.37■■□□□ 1.65
SDHA-206ENST00000505555 ARHGEF40Q8TER5 1519 aa25.36■■□□□ 1.65
SDHA-206ENST00000505555 U2SURPO15042 1029 aaKnown RBP25.36■■□□□ 1.65
SDHA-206ENST00000505555 HDGFL2Q7Z4V5 671 aaPredicted RBP25.36■■□□□ 1.65
SDHA-206ENST00000505555 BACH2Q9BYV9 841 aa25.36■■□□□ 1.65
SDHA-206ENST00000505555 PAK3O75914 559 aaPredicted RBP25.35■■□□□ 1.65
SDHA-206ENST00000505555 CENPQQ7L2Z9 268 aaPredicted RBP25.35■■□□□ 1.65
SDHA-206ENST00000505555 ESF1Q9H501 851 aaKnown RBP25.35■■□□□ 1.65
SDHA-206ENST00000505555 WDR63Q8IWG1 891 aa25.34■■□□□ 1.65
SDHA-206ENST00000505555 NPM2Q86SE8 214 aaKnown RBP25.33■■□□□ 1.65
SDHA-206ENST00000505555 NOP58Q9Y2X3 529 aaKnown RBP25.33■■□□□ 1.65
SDHA-206ENST00000505555 ZMYM3Q14202 1370 aa25.32■■□□□ 1.64
SDHA-206ENST00000505555 IPO9Q96P70 1041 aaKnown RBP25.32■■□□□ 1.64
SDHA-206ENST00000505555 CCDC27Q2M243 656 aa25.32■■□□□ 1.64
SDHA-206ENST00000505555 NLRP1Q9C000 1473 aa25.32■■□□□ 1.64
SDHA-206ENST00000505555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.31■■□□□ 1.64
SDHA-206ENST00000505555 CANXP27824 592 aaKnown RBP25.31■■□□□ 1.64
SDHA-206ENST00000505555 PANK1Q8TE04 598 aa25.31■■□□□ 1.64
SDHA-206ENST00000505555 FRAT1Q92837 279 aaPredicted RBP25.31■■□□□ 1.64
SDHA-206ENST00000505555 FBLN1P23142 703 aa25.29■■□□□ 1.64
SDHA-206ENST00000505555 RARSP54136 660 aaKnown RBP25.29■■□□□ 1.64
SDHA-206ENST00000505555 KIF13AQ9H1H9 1805 aa25.29■■□□□ 1.64
SDHA-206ENST00000505555 PLEKHF1Q96S99 279 aa25.28■■□□□ 1.64
SDHA-206ENST00000505555 METP08581 1390 aa25.28■■□□□ 1.64
SDHA-206ENST00000505555 PDE3AQ14432 1141 aa25.27■■□□□ 1.64
SDHA-206ENST00000505555 TXNDC2Q86VQ3 553 aa25.27■■□□□ 1.64
SDHA-206ENST00000505555 BCL2L13Q9BXK5 485 aa25.27■■□□□ 1.64
SDHA-206ENST00000505555 COG6Q9Y2V7 657 aa25.27■■□□□ 1.64
SDHA-206ENST00000505555 COL3A1P02461 1466 aaPredicted RBP25.26■■□□□ 1.63
SDHA-206ENST00000505555 DLC1Q96QB1 1528 aa25.25■■□□□ 1.63
SDHA-206ENST00000505555 MED14O60244 1454 aa25.25■■□□□ 1.63
SDHA-206ENST00000505555 SETD1AO15047 1707 aaKnown RBP25.25■■□□□ 1.63
SDHA-206ENST00000505555 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.24■■□□□ 1.63
SDHA-206ENST00000505555 DIAPH1O60610 1272 aaKnown RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms