RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 EP400Q96L91 3159 aa18.28■□□□□ 0.52
COL25A1-205ENST00000505377 NUTM2FA1L443 756 aa18.27■□□□□ 0.52
COL25A1-205ENST00000505377 FOXO3O43524 673 aa18.27■□□□□ 0.52
COL25A1-205ENST00000505377 NAIPQ13075 1403 aa18.26■□□□□ 0.51
COL25A1-205ENST00000505377 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
COL25A1-205ENST00000505377 COL22A1Q8NFW1 1626 aaPredicted RBP18.26■□□□□ 0.51
COL25A1-205ENST00000505377 PRAG1Q86YV5 1406 aa18.25■□□□□ 0.51
COL25A1-205ENST00000505377 PXDNQ92626 1479 aa18.25■□□□□ 0.51
COL25A1-205ENST00000505377 HFM1A2PYH4 1435 aa18.24■□□□□ 0.51
COL25A1-205ENST00000505377 WAPLQ7Z5K2 1190 aa18.24■□□□□ 0.51
COL25A1-205ENST00000505377 NPHP3Q7Z494 1330 aa18.23■□□□□ 0.51
COL25A1-205ENST00000505377 FOXD1Q16676 465 aa18.23■□□□□ 0.51
COL25A1-205ENST00000505377 GJD4Q96KN9 370 aaPredicted RBP18.23■□□□□ 0.51
COL25A1-205ENST00000505377 STK26Q9P289 416 aa18.23■□□□□ 0.51
COL25A1-205ENST00000505377 RPGRIP1LQ68CZ1 1315 aa18.23■□□□□ 0.51
COL25A1-205ENST00000505377 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
COL25A1-205ENST00000505377 PLEKHH1Q9ULM0 1364 aa18.2■□□□□ 0.5
COL25A1-205ENST00000505377 PPLO60437 1756 aa18.2■□□□□ 0.5
COL25A1-205ENST00000505377 SLC4A1APQ9BWU0 796 aaKnown RBP18.2■□□□□ 0.5
COL25A1-205ENST00000505377 CDC42BPGQ6DT37 1551 aa18.19■□□□□ 0.5
COL25A1-205ENST00000505377 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
COL25A1-205ENST00000505377 DEFB132Q7Z7B7 95 aa18.17■□□□□ 0.5
COL25A1-205ENST00000505377 CCDC125Q86Z20 511 aa18.17■□□□□ 0.5
COL25A1-205ENST00000505377 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
COL25A1-205ENST00000505377 MARF1Q9Y4F3 1742 aaKnown RBP18.17■□□□□ 0.5
COL25A1-205ENST00000505377 RRBP1Q9P2E9 1410 aaKnown RBP18.16■□□□□ 0.5
COL25A1-205ENST00000505377 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
COL25A1-205ENST00000505377 PLEKHG5O94827 1062 aa18.16■□□□□ 0.5
COL25A1-205ENST00000505377 RGL3Q3MIN7 710 aa18.16■□□□□ 0.5
COL25A1-205ENST00000505377 GLI3P10071 1580 aa18.16■□□□□ 0.5
COL25A1-205ENST00000505377 SPATA31A3Q5VYP0 1347 aa18.15■□□□□ 0.5
COL25A1-205ENST00000505377 SLIT2O94813 1529 aa18.14■□□□□ 0.49
COL25A1-205ENST00000505377 CABLES1Q8TDN4 633 aa18.14■□□□□ 0.49
COL25A1-205ENST00000505377 LRPPRCP42704 1394 aaKnown RBP18.14■□□□□ 0.49
COL25A1-205ENST00000505377 KRT28Q7Z3Y7 464 aa18.12■□□□□ 0.49
COL25A1-205ENST00000505377 TECPR2O15040 1411 aa18.12■□□□□ 0.49
COL25A1-205ENST00000505377 SEPT12Q8IYM1 358 aa18.11■□□□□ 0.49
COL25A1-205ENST00000505377 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
COL25A1-205ENST00000505377 BLMP54132 1417 aaPredicted RBP18.11■□□□□ 0.49
COL25A1-205ENST00000505377 BRWD3Q6RI45 1802 aa18.11■□□□□ 0.49
COL25A1-205ENST00000505377 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.09■□□□□ 0.49
COL25A1-205ENST00000505377 SPATA31E1Q6ZUB1 1445 aa18.09■□□□□ 0.49
COL25A1-205ENST00000505377 FMN2Q9NZ56 1722 aa18.08■□□□□ 0.48
COL25A1-205ENST00000505377 USP32Q8NFA0 1604 aa18.07■□□□□ 0.48
COL25A1-205ENST00000505377 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
COL25A1-205ENST00000505377 VPS72Q15906 364 aa18.06■□□□□ 0.48
COL25A1-205ENST00000505377 PHF8Q9UPP1 1060 aa18.06■□□□□ 0.48
COL25A1-205ENST00000505377 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
COL25A1-205ENST00000505377 RGPD8O14715 1765 aaPredicted RBP18.05■□□□□ 0.48
COL25A1-205ENST00000505377 HAP1P54257 671 aaPredicted RBP18.05■□□□□ 0.48
COL25A1-205ENST00000505377 CCDC9Q9Y3X0 531 aaKnown RBP18.05■□□□□ 0.48
COL25A1-205ENST00000505377 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
COL25A1-205ENST00000505377 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
COL25A1-205ENST00000505377 SAFB2Q14151 953 aaKnown RBP eCLIP18.04■□□□□ 0.48
COL25A1-205ENST00000505377 LMOD2Q6P5Q4 547 aa18.04■□□□□ 0.48
COL25A1-205ENST00000505377 PIK3C2GO75747 1445 aa18.04■□□□□ 0.48
COL25A1-205ENST00000505377 TNS3Q68CZ2 1445 aa18.04■□□□□ 0.48
COL25A1-205ENST00000505377 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
COL25A1-205ENST00000505377 ONECUT3O60422 494 aaPredicted RBP18.03■□□□□ 0.48
COL25A1-205ENST00000505377 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
COL25A1-205ENST00000505377 IFT172Q9UG01 1749 aa18.03■□□□□ 0.48
COL25A1-205ENST00000505377 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
COL25A1-205ENST00000505377 SF3B2Q13435 895 aaKnown RBP18.02■□□□□ 0.48
COL25A1-205ENST00000505377 CFAP70Q5T0N1 1121 aa18.02■□□□□ 0.48
COL25A1-205ENST00000505377 KRT27Q7Z3Y8 459 aa18.02■□□□□ 0.48
COL25A1-205ENST00000505377 MPHOSPH9Q99550 1183 aa18.02■□□□□ 0.48
COL25A1-205ENST00000505377 C14orf93Q9H972 538 aaKnown RBP18.01■□□□□ 0.47
COL25A1-205ENST00000505377 PSME1Q06323 249 aa18■□□□□ 0.47
COL25A1-205ENST00000505377 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
COL25A1-205ENST00000505377 SIRT1Q96EB6 747 aa18■□□□□ 0.47
COL25A1-205ENST00000505377 PLCH1Q4KWH8 1693 aa17.99■□□□□ 0.47
COL25A1-205ENST00000505377 FAM182BQ5T319 152 aa17.99■□□□□ 0.47
COL25A1-205ENST00000505377 PRAM1Q96QH2 718 aa17.99■□□□□ 0.47
COL25A1-205ENST00000505377 A0A0G2JS52 829 aa17.98■□□□□ 0.47
COL25A1-205ENST00000505377 MYT1Q01538 1121 aa17.98■□□□□ 0.47
COL25A1-205ENST00000505377 FAM98CQ17RN3 349 aaKnown RBP17.98■□□□□ 0.47
COL25A1-205ENST00000505377 SBNO1A3KN83 1393 aa17.98■□□□□ 0.47
COL25A1-205ENST00000505377 NRXN1Q9ULB1 1477 aa17.98■□□□□ 0.47
COL25A1-205ENST00000505377 ABCA3Q99758 1704 aa17.97■□□□□ 0.47
COL25A1-205ENST00000505377 NWD2Q9ULI1 1742 aa17.95■□□□□ 0.46
COL25A1-205ENST00000505377 HRCP23327 699 aa17.95■□□□□ 0.46
COL25A1-205ENST00000505377 BTG4Q9NY30 223 aa17.95■□□□□ 0.46
COL25A1-205ENST00000505377 ARHGEF10O15013 1369 aa17.94■□□□□ 0.46
COL25A1-205ENST00000505377 EN1Q05925 392 aaPredicted RBP17.94■□□□□ 0.46
COL25A1-205ENST00000505377 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
COL25A1-205ENST00000505377 BAG6P46379 1132 aa17.93■□□□□ 0.46
COL25A1-205ENST00000505377 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
COL25A1-205ENST00000505377 LRP5O75197 1615 aa17.93■□□□□ 0.46
COL25A1-205ENST00000505377 POGKQ9P215 609 aa17.92■□□□□ 0.46
COL25A1-205ENST00000505377 PRR36Q9H6K5 1346 aa17.92■□□□□ 0.46
COL25A1-205ENST00000505377 NRAPQ86VF7 1730 aa17.91■□□□□ 0.46
COL25A1-205ENST00000505377 R3HDM1Q15032 1099 aaKnown RBP17.89■□□□□ 0.45
COL25A1-205ENST00000505377 SPATA31A5Q5VU36 1347 aa17.89■□□□□ 0.45
COL25A1-205ENST00000505377 SPATA31A7Q8IWB4 1347 aa17.89■□□□□ 0.45
COL25A1-205ENST00000505377 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
COL25A1-205ENST00000505377 TRPM3Q9HCF6 1732 aaPredicted RBP17.89■□□□□ 0.45
COL25A1-205ENST00000505377 TRAK1Q9UPV9 953 aa17.88■□□□□ 0.45
COL25A1-205ENST00000505377 ANKARQ7Z5J8 1434 aa17.88■□□□□ 0.45
COL25A1-205ENST00000505377 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
COL25A1-205ENST00000505377 EZH2Q15910 746 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms