RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ANO8Q9HCE9 1232 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 BMP2KQ9NSY1 1161 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 FDX1P10109 184 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 GJA5P36382 358 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 NAALADL2Q58DX5 795 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 ANKRD13AQ8IZ07 590 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 PTCD2Q8WV60 388 aaKnown RBP5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 C8orf37Q96NL8 207 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 OCEL1Q9H607 264 aa5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 CWC22Q9HCG8 908 aaKnown RBP5.32□□□□□ -1.56
HMGB1P22-201ENST00000505315 ANKRD62A6NC57 917 aa5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 KDM4AO75164 1064 aa5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 FXR2P51116 673 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 TSNAXIP1Q2TAA8 658 aa5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 C6orf132Q5T0Z8 1188 aa5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 LARP1Q6PKG0 1096 aaKnown RBP5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 ZMIZ1Q9ULJ6 1067 aa5.31□□□□□ -1.56
HMGB1P22-201ENST00000505315 ABL1P00519 1130 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 SKIP12755 728 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 PLCG2P16885 1265 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 SSFA2P28290 1259 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 ERCC5P28715 1186 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 PRSS12P56730 875 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 ELOAQ14241 798 aaKnown RBP5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 KANK4Q5T7N3 995 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 PHLDB3Q6NSJ2 640 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 TMEM92Q6UXU6 159 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 FAM200AQ8TCP9 573 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 EPS8L1Q8TE68 723 aa5.3□□□□□ -1.56
HMGB1P22-201ENST00000505315 ATP2B4P23634 1241 aa5.29□□□□□ -1.56
HMGB1P22-201ENST00000505315 DEPDC4Q8N2C3 294 aa5.29□□□□□ -1.56
HMGB1P22-201ENST00000505315 CDCA7LQ96GN5 454 aa5.29□□□□□ -1.56
HMGB1P22-201ENST00000505315 USP17L3A6NCW0 530 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 USP17L4A6NCW7 530 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 C6orf229H3BNL8 230 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 GPR37L1O60883 481 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 RASA1P20936 1047 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 MTMR2Q13614 643 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 NR6A1Q15406 480 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 USP17L2Q6R6M4 530 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 USP17L1Q7RTZ2 530 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 ZNF454Q8N9F8 522 aa5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 RBM27Q9P2N5 1060 aaKnown RBP5.28□□□□□ -1.56
HMGB1P22-201ENST00000505315 PIK3CDO00329 1044 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 DNAJB2P25686 324 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 MAPK1P28482 360 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP46P62068 366 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 GUCA2AQ02747 115 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 NOM1Q5C9Z4 860 aaKnown RBP5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 NPAS4Q8IUM7 802 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 DHX37Q8IY37 1157 aaKnown RBP5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 ZDHHC16Q969W1 377 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 JPH4Q96JJ6 628 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 ANO2Q9NQ90 1003 aa5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 MKRN1Q9UHC7 482 aaKnown RBP5.27□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L5A8MUK1 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L15C9J2P7 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L10C9JJH3 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L13C9JLJ4 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L12C9JPN9 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L11C9JVI0 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L21D6R901 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L18D6R9N7 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L22D6RA61 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L17D6RBQ6 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L19D6RCP7 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L20D6RJB6 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 HOXA2O43364 376 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 USP17L24Q0WX57 530 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 GLYCTKQ8IVS8 523 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 SLF2Q8IX21 1173 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 TTC13Q8NBP0 860 aa5.26□□□□□ -1.57
HMGB1P22-201ENST00000505315 H3BRB1 525 aa5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 SCNN1AP37088 669 aa5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 IRX5P78411 483 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 TAGLNQ01995 201 aaKnown RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 CRTC2Q53ET0 693 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 C9orf131Q5VYM1 1079 aa5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 NUDT18Q6ZVK8 323 aa5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 FAM9AQ8IZU1 332 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 HIRIP3Q9BW71 556 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 CDCA7Q9BWT1 371 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 TUT1Q9H6E5 874 aaKnown RBP5.25□□□□□ -1.57
HMGB1P22-201ENST00000505315 FAM196BA6NMK8 535 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 CFAP99D6REC4 459 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 VAMP1P23763 118 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 NR1H3Q13133 447 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 ZNF211Q13398 564 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 NOL8Q76FK4 1167 aaKnown RBP5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 DPH6Q7L8W6 267 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 ZSCAN29Q8IWY8 852 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 PIP4P2Q8N4L2 257 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 CLP1Q92989 425 aaKnown RBP5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 HLA-CQ95604 372 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 EYA1Q99502 592 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 TANGO6Q9C0B7 1094 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 PNMA3Q9UL41 463 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 PCDHGC3Q9UN70 934 aa5.24□□□□□ -1.57
HMGB1P22-201ENST00000505315 NBPF26B4DH59 902 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 SEC24BO95487 1268 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms