RNA–Protein interactions for RNA: ENST00000505187.5

SPOCK3-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 2

Gene SPOCK3, Length 1,588 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-208	ENST00000505187	NWD1	Q149M9	1564 aa		29.28	■■■□□ 2.28
SPOCK3-208	ENST00000505187	ROBO2	Q9HCK4	1378 aa		29.28	■■■□□ 2.28
SPOCK3-208	ENST00000505187	PLEKHH1	Q9ULM0	1364 aa		29.26	■■■□□ 2.27
SPOCK3-208	ENST00000505187	MYOM1	P52179	1685 aa		29.26	■■■□□ 2.27
SPOCK3-208	ENST00000505187	POLR3GL	Q9BT43	218 aa		29.26	■■■□□ 2.27
SPOCK3-208	ENST00000505187	ADGRB2	O60241	1585 aa		29.25	■■■□□ 2.27
SPOCK3-208	ENST00000505187	WAPL	Q7Z5K2	1190 aa		29.24	■■■□□ 2.27
SPOCK3-208	ENST00000505187	SAFB2	Q14151	953 aa	Known RBP eCLIP	29.23	■■■□□ 2.27
SPOCK3-208	ENST00000505187	MINK1	Q8N4C8	1332 aa	Predicted RBP	29.21	■■■□□ 2.27
SPOCK3-208	ENST00000505187	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.21	■■■□□ 2.27
SPOCK3-208	ENST00000505187	KCNA6	P17658	529 aa		29.19	■■■□□ 2.26
SPOCK3-208	ENST00000505187	NKTR	P30414	1462 aa	Known RBP	29.16	■■■□□ 2.26
SPOCK3-208	ENST00000505187	ATAD2	Q6PL18	1390 aa		29.15	■■■□□ 2.26
SPOCK3-208	ENST00000505187	NINL	Q9Y2I6	1382 aa		29.14	■■■□□ 2.26
SPOCK3-208	ENST00000505187	WASL	O00401	505 aa	Predicted RBP	29.11	■■■□□ 2.25
SPOCK3-208	ENST00000505187	CDK19	Q9BWU1	502 aa		29.11	■■■□□ 2.25
SPOCK3-208	ENST00000505187	SRPK2	P78362	688 aa	Known RBP	29.1	■■■□□ 2.25
SPOCK3-208	ENST00000505187	CABP2	Q9NPB3	220 aa		29.09	■■■□□ 2.25
SPOCK3-208	ENST00000505187	STRCP1	A6NGW2	1772 aa		29.09	■■■□□ 2.25
SPOCK3-208	ENST00000505187	NALCN	Q8IZF0	1738 aa		29.07	■■■□□ 2.24
SPOCK3-208	ENST00000505187	DMRT2	Q9Y5R5	561 aa		29.06	■■■□□ 2.24
SPOCK3-208	ENST00000505187	PANK3	Q9H999	370 aa		29.05	■■■□□ 2.24
SPOCK3-208	ENST00000505187	CDC42BPG	Q6DT37	1551 aa		29.05	■■■□□ 2.24
SPOCK3-208	ENST00000505187	ANP32C	O43423	234 aa		29.05	■■■□□ 2.24
SPOCK3-208	ENST00000505187	ADGRL3	Q9HAR2	1447 aa		29.03	■■■□□ 2.24
SPOCK3-208	ENST00000505187	FMN2	Q9NZ56	1722 aa		29.03	■■■□□ 2.24
SPOCK3-208	ENST00000505187	PER1	O15534	1290 aa	Predicted RBP	29.02	■■■□□ 2.24
SPOCK3-208	ENST00000505187	MIER1	Q8N108	512 aa		29.02	■■■□□ 2.24
SPOCK3-208	ENST00000505187	TOPAZ1	Q8N9V7	1692 aa		29.02	■■■□□ 2.24
SPOCK3-208	ENST00000505187	ITSN1	Q15811	1721 aa		29.01	■■■□□ 2.24
SPOCK3-208	ENST00000505187	ATP7B	P35670	1465 aa		29.01	■■■□□ 2.23
SPOCK3-208	ENST00000505187	NCOA3	Q9Y6Q9	1424 aa		29.01	■■■□□ 2.23
SPOCK3-208	ENST00000505187	TMC1	Q8TDI8	760 aa		29	■■■□□ 2.23
SPOCK3-208	ENST00000505187	ANKRD36B	Q8N2N9	1353 aa		28.99	■■■□□ 2.23
SPOCK3-208	ENST00000505187	SLC12A5	Q9H2X9	1139 aa		28.98	■■■□□ 2.23
SPOCK3-208	ENST00000505187	ANKAR	Q7Z5J8	1434 aa		28.97	■■■□□ 2.23
SPOCK3-208	ENST00000505187	PROSER2	Q86WR7	435 aa	Predicted RBP	28.96	■■■□□ 2.23
SPOCK3-208	ENST00000505187	NUDT16	Q96DE0	195 aa	Known RBP	28.96	■■■□□ 2.23
SPOCK3-208	ENST00000505187	USP32	Q8NFA0	1604 aa		28.96	■■■□□ 2.23
SPOCK3-208	ENST00000505187	CCDC61	Q9Y6R9	512 aa		28.95	■■■□□ 2.22
SPOCK3-208	ENST00000505187	KTN1	Q86UP2	1357 aa	Known RBP	28.95	■■■□□ 2.22
SPOCK3-208	ENST00000505187	KNSTRN	Q9Y448	316 aa		28.94	■■■□□ 2.22
SPOCK3-208	ENST00000505187	NPC1L1	Q9UHC9	1359 aa		28.94	■■■□□ 2.22
SPOCK3-208	ENST00000505187	TERF2IP	Q9NYB0	399 aa		28.93	■■■□□ 2.22
SPOCK3-208	ENST00000505187	PPIP5K1	Q6PFW1	1433 aa		28.93	■■■□□ 2.22
SPOCK3-208	ENST00000505187	PRR36	Q9H6K5	1346 aa		28.92	■■■□□ 2.22
SPOCK3-208	ENST00000505187	RGPD8	O14715	1765 aa	Predicted RBP	28.92	■■■□□ 2.22
SPOCK3-208	ENST00000505187	AKAP12	Q02952	1782 aa		28.92	■■■□□ 2.22
SPOCK3-208	ENST00000505187	CD163L1	Q9NR16	1453 aa		28.92	■■■□□ 2.22
SPOCK3-208	ENST00000505187	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.92	■■■□□ 2.22
SPOCK3-208	ENST00000505187	XIRP1	Q702N8	1843 aa	Known RBP	28.91	■■■□□ 2.22
SPOCK3-208	ENST00000505187	CABP1	Q9NZU7	370 aa		28.9	■■■□□ 2.22
SPOCK3-208	ENST00000505187		A0A1W2PP64	1363 aa		28.89	■■■□□ 2.22
SPOCK3-208	ENST00000505187	DCC	P43146	1447 aa		28.89	■■■□□ 2.21
SPOCK3-208	ENST00000505187	TMEM94	Q12767	1356 aa		28.89	■■■□□ 2.21
SPOCK3-208	ENST00000505187	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.88	■■■□□ 2.21
SPOCK3-208	ENST00000505187	CARD14	Q9BXL6	1004 aa		28.88	■■■□□ 2.21
SPOCK3-208	ENST00000505187	MON2	Q7Z3U7	1717 aa		28.88	■■■□□ 2.21
SPOCK3-208	ENST00000505187	NSD3	Q9BZ95	1437 aa		28.88	■■■□□ 2.21
SPOCK3-208	ENST00000505187	CPSF1	Q10570	1443 aa	Known RBP	28.86	■■■□□ 2.21
SPOCK3-208	ENST00000505187	PLEKHG3	A1L390	1219 aa		28.86	■■■□□ 2.21
SPOCK3-208	ENST00000505187	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.86	■■■□□ 2.21
SPOCK3-208	ENST00000505187	C14orf37	Q86TY3	774 aa		28.86	■■■□□ 2.21
SPOCK3-208	ENST00000505187	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.85	■■■□□ 2.21
SPOCK3-208	ENST00000505187	CCER2	I3L3R5	266 aa		28.85	■■■□□ 2.21
SPOCK3-208	ENST00000505187	RALBP1	Q15311	655 aa		28.85	■■■□□ 2.21
SPOCK3-208	ENST00000505187	C19orf44	Q9H6X5	657 aa		28.85	■■■□□ 2.21
SPOCK3-208	ENST00000505187	LRRC7	Q96NW7	1537 aa		28.85	■■■□□ 2.21
SPOCK3-208	ENST00000505187	PARD3	Q8TEW0	1356 aa		28.84	■■■□□ 2.21
SPOCK3-208	ENST00000505187	RBM33	Q96EV2	1170 aa	Known RBP	28.83	■■■□□ 2.21
SPOCK3-208	ENST00000505187	NSD2	O96028	1365 aa		28.81	■■■□□ 2.2
SPOCK3-208	ENST00000505187	ZNF692	Q9BU19	519 aa	Predicted RBP	28.8	■■■□□ 2.2
SPOCK3-208	ENST00000505187	CGNL1	Q0VF96	1302 aa		28.8	■■■□□ 2.2
SPOCK3-208	ENST00000505187	ANKRD26	Q9UPS8	1709 aa		28.8	■■■□□ 2.2
SPOCK3-208	ENST00000505187	KIF20B	Q96Q89	1820 aa		28.8	■■■□□ 2.2
SPOCK3-208	ENST00000505187	EDC4	Q6P2E9	1401 aa	Known RBP	28.78	■■■□□ 2.2
SPOCK3-208	ENST00000505187	POLR3A	O14802	1390 aa	Predicted RBP	28.78	■■■□□ 2.2
SPOCK3-208	ENST00000505187	NUTM2F	A1L443	756 aa		28.78	■■■□□ 2.2
SPOCK3-208	ENST00000505187	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.78	■■■□□ 2.2
SPOCK3-208	ENST00000505187	MSH6	P52701	1360 aa		28.77	■■■□□ 2.2
SPOCK3-208	ENST00000505187	NRK	Q7Z2Y5	1582 aa		28.76	■■■□□ 2.19
SPOCK3-208	ENST00000505187	CC2D1B	Q5T0F9	858 aa	Known RBP	28.75	■■■□□ 2.19
SPOCK3-208	ENST00000505187	ACE	P12821	1306 aa		28.74	■■■□□ 2.19
SPOCK3-208	ENST00000505187	KIF1A	Q12756	1690 aa		28.74	■■■□□ 2.19
SPOCK3-208	ENST00000505187	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.74	■■■□□ 2.19
SPOCK3-208	ENST00000505187	ATF3	P18847	181 aa		28.73	■■■□□ 2.19
SPOCK3-208	ENST00000505187	CADPS2	Q86UW7	1296 aa		28.72	■■■□□ 2.19
SPOCK3-208	ENST00000505187	USP6	P35125	1406 aa		28.72	■■■□□ 2.19
SPOCK3-208	ENST00000505187	MST1R	Q04912	1400 aa		28.71	■■■□□ 2.19
SPOCK3-208	ENST00000505187	C1orf167	Q5SNV9	1468 aa		28.71	■■■□□ 2.19
SPOCK3-208	ENST00000505187	LTBP4	Q8N2S1	1624 aa		28.7	■■■□□ 2.19
SPOCK3-208	ENST00000505187	BRD4	O60885	1362 aa	Predicted RBP	28.69	■■■□□ 2.18
SPOCK3-208	ENST00000505187	PHF8	Q9UPP1	1060 aa		28.69	■■■□□ 2.18
SPOCK3-208	ENST00000505187	CNGB1	Q14028	1251 aa	Predicted RBP	28.68	■■■□□ 2.18
SPOCK3-208	ENST00000505187	NGDN	Q8NEJ9	315 aa	Known RBP	28.67	■■■□□ 2.18
SPOCK3-208	ENST00000505187	SSH2	Q76I76	1423 aa		28.67	■■■□□ 2.18
SPOCK3-208	ENST00000505187	PMFBP1	Q8TBY8	1022 aa		28.67	■■■□□ 2.18
SPOCK3-208	ENST00000505187	FYB1	O15117	783 aa		28.65	■■■□□ 2.18
SPOCK3-208	ENST00000505187	NLRP13	Q86W25	1043 aa		28.65	■■■□□ 2.18
SPOCK3-208	ENST00000505187	ESCO1	Q5FWF5	840 aa		28.63	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms