RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 SCUBE3Q8IX30 993 aa12.09□□□□□ -0.47
TRAPPC13-207ENST00000505108 COPS2P61201 443 aa12.08□□□□□ -0.48
TRAPPC13-207ENST00000505108 NYAP1Q6ZVC0 841 aa12.08□□□□□ -0.48
TRAPPC13-207ENST00000505108 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
TRAPPC13-207ENST00000505108 NUTM2BA6NNL0 878 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC13-207ENST00000505108 NUTM2EB1AL46 878 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC13-207ENST00000505108 C6orf229H3BNL8 230 aa12.07□□□□□ -0.48
TRAPPC13-207ENST00000505108 NUTM2DQ5VT03 806 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC13-207ENST00000505108 RNF19BQ6ZMZ0 732 aa12.07□□□□□ -0.48
TRAPPC13-207ENST00000505108 NUTM2AQ8IVF1 878 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC13-207ENST00000505108 MTMR2Q13614 643 aa12.06□□□□□ -0.48
TRAPPC13-207ENST00000505108 THAP11Q96EK4 314 aa12.05□□□□□ -0.48
TRAPPC13-207ENST00000505108 NR1I2O75469 434 aa12.04□□□□□ -0.48
TRAPPC13-207ENST00000505108 BRICD5Q6PL45 260 aa12.04□□□□□ -0.48
TRAPPC13-207ENST00000505108 MTRQ99707 1265 aa12.04□□□□□ -0.48
TRAPPC13-207ENST00000505108 CFAP99D6REC4 459 aa12.03□□□□□ -0.48
TRAPPC13-207ENST00000505108 MMRN1Q13201 1228 aa12.03□□□□□ -0.48
TRAPPC13-207ENST00000505108 Q3C1V9 767 aa12.03□□□□□ -0.48
TRAPPC13-207ENST00000505108 TJAP1Q5JTD0 557 aa12.03□□□□□ -0.48
TRAPPC13-207ENST00000505108 HCSTQ9UBK5 93 aa12.02□□□□□ -0.49
TRAPPC13-207ENST00000505108 ZNF516Q92618 1163 aa12.01□□□□□ -0.49
TRAPPC13-207ENST00000505108 SALL2Q9Y467 1007 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC13-207ENST00000505108 SPDYE5A6NIY4 337 aa12□□□□□ -0.49
TRAPPC13-207ENST00000505108 RETREG3Q86VR2 466 aa12□□□□□ -0.49
TRAPPC13-207ENST00000505108 TIMELESSQ9UNS1 1208 aa12□□□□□ -0.49
TRAPPC13-207ENST00000505108 TLL1O43897 1013 aa11.99□□□□□ -0.49
TRAPPC13-207ENST00000505108 ZPR1O75312 459 aa11.99□□□□□ -0.49
TRAPPC13-207ENST00000505108 AP1G2O75843 785 aa11.99□□□□□ -0.49
TRAPPC13-207ENST00000505108 FMNL1O95466 1100 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC13-207ENST00000505108 TMEM259Q4ZIN3 620 aa11.99□□□□□ -0.49
TRAPPC13-207ENST00000505108 PRR7Q8TB68 274 aa11.99□□□□□ -0.49
TRAPPC13-207ENST00000505108 USB1Q9BQ65 265 aaKnown RBP11.98□□□□□ -0.49
TRAPPC13-207ENST00000505108 SNRKQ9NRH2 765 aa11.98□□□□□ -0.49
TRAPPC13-207ENST00000505108 FAM160A2Q8N612 972 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC13-207ENST00000505108 IL21Q9HBE4 155 aa11.97□□□□□ -0.49
TRAPPC13-207ENST00000505108 CTDSPL2Q05D32 466 aa11.96□□□□□ -0.49
TRAPPC13-207ENST00000505108 MCM6Q14566 821 aa11.96□□□□□ -0.49
TRAPPC13-207ENST00000505108 TSC1Q92574 1164 aa11.96□□□□□ -0.49
TRAPPC13-207ENST00000505108 SPSB2Q99619 263 aa11.96□□□□□ -0.49
TRAPPC13-207ENST00000505108 BANK1Q8NDB2 785 aa11.95□□□□□ -0.5
TRAPPC13-207ENST00000505108 FLIIQ13045 1269 aa11.94□□□□□ -0.5
TRAPPC13-207ENST00000505108 NKX2-3Q8TAU0 364 aa11.94□□□□□ -0.5
TRAPPC13-207ENST00000505108 PER1O15534 1290 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC13-207ENST00000505108 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
TRAPPC13-207ENST00000505108 C14orf37Q86TY3 774 aa11.93□□□□□ -0.5
TRAPPC13-207ENST00000505108 PRDM9Q9NQV7 894 aa11.93□□□□□ -0.5
TRAPPC13-207ENST00000505108 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
TRAPPC13-207ENST00000505108 HELBQ8NG08 1087 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC13-207ENST00000505108 ADH1BP00325 375 aa11.91□□□□□ -0.5
TRAPPC13-207ENST00000505108 LRRN4Q8WUT4 740 aa11.91□□□□□ -0.5
TRAPPC13-207ENST00000505108 MSS51Q4VC12 460 aa11.9□□□□□ -0.5
TRAPPC13-207ENST00000505108 DESI1Q6ICB0 168 aa11.9□□□□□ -0.5
TRAPPC13-207ENST00000505108 HMX1Q9NP08 348 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC13-207ENST00000505108 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC13-207ENST00000505108 JUNDP17535 347 aa11.88□□□□□ -0.51
TRAPPC13-207ENST00000505108 DXOO77932 396 aaKnown RBP11.87□□□□□ -0.51
TRAPPC13-207ENST00000505108 LYPD8Q6UX82 237 aa11.87□□□□□ -0.51
TRAPPC13-207ENST00000505108 MMP16P51512 607 aa11.86□□□□□ -0.51
TRAPPC13-207ENST00000505108 KCNC4Q03721 635 aa11.86□□□□□ -0.51
TRAPPC13-207ENST00000505108 POM121Q96HA1 1249 aa11.85□□□□□ -0.51
TRAPPC13-207ENST00000505108 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC13-207ENST00000505108 EPS8L1Q8TE68 723 aa11.84□□□□□ -0.51
TRAPPC13-207ENST00000505108 CLUAP1Q96AJ1 413 aa11.84□□□□□ -0.51
TRAPPC13-207ENST00000505108 TRIM34Q9BYJ4 488 aa11.84□□□□□ -0.51
TRAPPC13-207ENST00000505108 SLC6A16Q9GZN6 736 aa11.84□□□□□ -0.51
TRAPPC13-207ENST00000505108 S1PR4O95977 384 aa11.83□□□□□ -0.52
TRAPPC13-207ENST00000505108 UBTFP17480 764 aaKnown RBP11.83□□□□□ -0.52
TRAPPC13-207ENST00000505108 PTPRNQ16849 979 aa11.82□□□□□ -0.52
TRAPPC13-207ENST00000505108 SOCS7O14512 581 aa11.81□□□□□ -0.52
TRAPPC13-207ENST00000505108 ERICH6Q7L0X2 663 aa11.81□□□□□ -0.52
TRAPPC13-207ENST00000505108 COG6Q9Y2V7 657 aa11.81□□□□□ -0.52
TRAPPC13-207ENST00000505108 NR6A1Q15406 480 aa11.8□□□□□ -0.52
TRAPPC13-207ENST00000505108 ZMYND15Q9H091 742 aa11.8□□□□□ -0.52
TRAPPC13-207ENST00000505108 MAP10Q9P2G4 905 aa11.8□□□□□ -0.52
TRAPPC13-207ENST00000505108 F12P00748 615 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC13-207ENST00000505108 NUDT12Q9BQG2 462 aa11.79□□□□□ -0.52
TRAPPC13-207ENST00000505108 GPR37L1O60883 481 aa11.78□□□□□ -0.52
TRAPPC13-207ENST00000505108 GDPD2Q9HCC8 539 aa11.78□□□□□ -0.52
TRAPPC13-207ENST00000505108 TBC1D2BQ9UPU7 963 aa11.78□□□□□ -0.52
TRAPPC13-207ENST00000505108 PPEF1O14829 653 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC13-207ENST00000505108 CCNYL3P0C7X3 344 aa11.77□□□□□ -0.53
TRAPPC13-207ENST00000505108 EVA1BQ9NVM1 165 aa11.76□□□□□ -0.53
TRAPPC13-207ENST00000505108 FCF1Q9Y324 198 aaKnown RBP11.75□□□□□ -0.53
TRAPPC13-207ENST00000505108 RNF223E7ERA6 249 aa11.74□□□□□ -0.53
TRAPPC13-207ENST00000505108 CTHP32929 405 aa11.74□□□□□ -0.53
TRAPPC13-207ENST00000505108 PTCRAQ6ISU1 281 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC13-207ENST00000505108 CCDC24Q8N4L8 307 aa11.74□□□□□ -0.53
TRAPPC13-207ENST00000505108 NDUFB9Q9Y6M9 179 aa11.74□□□□□ -0.53
TRAPPC13-207ENST00000505108 A6NJR5 290 aa11.73□□□□□ -0.53
TRAPPC13-207ENST00000505108 APBB1O00213 710 aa11.73□□□□□ -0.53
TRAPPC13-207ENST00000505108 KCNH2Q12809 1159 aa11.73□□□□□ -0.53
TRAPPC13-207ENST00000505108 PPP1R18Q6NYC8 613 aa11.73□□□□□ -0.53
TRAPPC13-207ENST00000505108 RAD21O60216 631 aa11.72□□□□□ -0.53
TRAPPC13-207ENST00000505108 ABL2P42684 1182 aa11.72□□□□□ -0.53
TRAPPC13-207ENST00000505108 IRF5Q13568 498 aa11.7□□□□□ -0.54
TRAPPC13-207ENST00000505108 PROSER2Q86WR7 435 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC13-207ENST00000505108 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC13-207ENST00000505108 PLA2G2CQ5R387 149 aa11.69□□□□□ -0.54
TRAPPC13-207ENST00000505108 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.69□□□□□ -0.54
TRAPPC13-207ENST00000505108 PLA2G2EQ9NZK7 142 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms