RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 ARHGEF12Q9NZN5 1544 aa7.91□□□□□ -1.14
CDH9-203ENST00000505045 NRG2O14511 850 aaPredicted RBP7.91□□□□□ -1.14
CDH9-203ENST00000505045 SLC4A5Q9BY07 1137 aa7.91□□□□□ -1.14
CDH9-203ENST00000505045 ADAM33Q9BZ11 813 aa7.91□□□□□ -1.14
CDH9-203ENST00000505045 SCAPERQ9BY12 1400 aa7.91□□□□□ -1.14
CDH9-203ENST00000505045 KCNK17Q96T54 332 aa7.9□□□□□ -1.14
CDH9-203ENST00000505045 TSHZ2Q9NRE2 1034 aa7.9□□□□□ -1.14
CDH9-203ENST00000505045 SAMD9LQ8IVG5 1584 aa7.9□□□□□ -1.14
CDH9-203ENST00000505045 PTPRMP28827 1452 aa7.9□□□□□ -1.14
CDH9-203ENST00000505045 DIP2CQ9Y2E4 1556 aa7.9□□□□□ -1.15
CDH9-203ENST00000505045 ITGBL1O95965 494 aaPredicted RBP7.89□□□□□ -1.15
CDH9-203ENST00000505045 E2F4Q16254 413 aa7.89□□□□□ -1.15
CDH9-203ENST00000505045 FER1L4A9Z1Z3 1794 aa7.89□□□□□ -1.15
CDH9-203ENST00000505045 PHF14O94880 888 aa7.89□□□□□ -1.15
CDH9-203ENST00000505045 PDIA6Q15084 440 aa7.89□□□□□ -1.15
CDH9-203ENST00000505045 ZNF518AQ6AHZ1 1483 aa7.88□□□□□ -1.15
CDH9-203ENST00000505045 SYCP2Q9BX26 1530 aa7.88□□□□□ -1.15
CDH9-203ENST00000505045 MAGI2Q86UL8 1455 aa7.87□□□□□ -1.15
CDH9-203ENST00000505045 KIDINS220Q9ULH0 1771 aa7.87□□□□□ -1.15
CDH9-203ENST00000505045 PTPREP23469 700 aa7.87□□□□□ -1.15
CDH9-203ENST00000505045 TYW1BQ6NUM6 668 aa7.87□□□□□ -1.15
CDH9-203ENST00000505045 VPS9D1Q9Y2B5 631 aa7.87□□□□□ -1.15
CDH9-203ENST00000505045 TIAM1Q13009 1591 aa7.87□□□□□ -1.15
CDH9-203ENST00000505045 TRAPPC8Q9Y2L5 1435 aa7.87□□□□□ -1.15
CDH9-203ENST00000505045 ZBED2Q9BTP6 218 aa7.87□□□□□ -1.15
CDH9-203ENST00000505045 CDK11AQ9UQ88 783 aaPredicted RBP7.87□□□□□ -1.15
CDH9-203ENST00000505045 GPATCH8Q9UKJ3 1502 aaKnown RBP7.86□□□□□ -1.15
CDH9-203ENST00000505045 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
CDH9-203ENST00000505045 FBXW7Q969H0 707 aa7.86□□□□□ -1.15
CDH9-203ENST00000505045 EPAS1Q99814 870 aa7.86□□□□□ -1.15
CDH9-203ENST00000505045 EHBP1L1Q8N3D4 1523 aa7.86□□□□□ -1.15
CDH9-203ENST00000505045 EFCAB2Q5VUJ9 269 aa7.85□□□□□ -1.15
CDH9-203ENST00000505045 AFAP1Q8N556 730 aa7.85□□□□□ -1.15
CDH9-203ENST00000505045 WDR70Q9NW82 654 aa7.85□□□□□ -1.15
CDH9-203ENST00000505045 C9orf84Q5VXU9 1444 aa7.85□□□□□ -1.15
CDH9-203ENST00000505045 LOC105371045A0A1W2PR82 267 aa7.85□□□□□ -1.15
CDH9-203ENST00000505045 BHMG1C9JSJ3 638 aaPredicted RBP7.85□□□□□ -1.15
CDH9-203ENST00000505045 ARID4BQ4LE39 1312 aaPredicted RBP7.85□□□□□ -1.15
CDH9-203ENST00000505045 LMTK3Q96Q04 1460 aa7.84□□□□□ -1.15
CDH9-203ENST00000505045 REREQ9P2R6 1566 aa7.84□□□□□ -1.15
CDH9-203ENST00000505045 INO80Q9ULG1 1556 aaPredicted RBP7.84□□□□□ -1.15
CDH9-203ENST00000505045 ATP10AO60312 1499 aa7.84□□□□□ -1.15
CDH9-203ENST00000505045 WNT2BQ93097 391 aa7.84□□□□□ -1.15
CDH9-203ENST00000505045 MLH3Q9UHC1 1453 aa7.83□□□□□ -1.16
CDH9-203ENST00000505045 PPP1R3GB7ZBB8 358 aa7.83□□□□□ -1.16
CDH9-203ENST00000505045 COL9A1P20849 921 aa7.82□□□□□ -1.16
CDH9-203ENST00000505045 MTUS2Q5JR59 1369 aa7.82□□□□□ -1.16
CDH9-203ENST00000505045 SUPT6HQ7KZ85 1726 aaKnown RBP7.82□□□□□ -1.16
CDH9-203ENST00000505045 MLECQ14165 292 aa7.82□□□□□ -1.16
CDH9-203ENST00000505045 ATP7AQ04656 1500 aa7.82□□□□□ -1.16
CDH9-203ENST00000505045 VPS8Q8N3P4 1428 aa7.81□□□□□ -1.16
CDH9-203ENST00000505045 DDX12PQ92771 950 aa7.81□□□□□ -1.16
CDH9-203ENST00000505045 STK17AQ9UEE5 414 aa7.81□□□□□ -1.16
CDH9-203ENST00000505045 PLXNC1O60486 1568 aa7.81□□□□□ -1.16
CDH9-203ENST00000505045 C3P01024 1663 aa7.81□□□□□ -1.16
CDH9-203ENST00000505045 GOLGA8CPA6NN73 597 aa7.8□□□□□ -1.16
CDH9-203ENST00000505045 PLCB2Q00722 1185 aa7.8□□□□□ -1.16
CDH9-203ENST00000505045 C6orf132Q5T0Z8 1188 aa7.8□□□□□ -1.16
CDH9-203ENST00000505045 NCOA2Q15596 1464 aa7.8□□□□□ -1.16
CDH9-203ENST00000505045 ADGBQ8N7X0 1667 aa7.8□□□□□ -1.16
CDH9-203ENST00000505045 ZNF644Q9H582 1327 aaPredicted RBP7.8□□□□□ -1.16
CDH9-203ENST00000505045 ZNF777Q9ULD5 760 aaPredicted RBP7.8□□□□□ -1.16
CDH9-203ENST00000505045 CCNB3Q8WWL7 1395 aa7.79□□□□□ -1.16
CDH9-203ENST00000505045 AGLP35573 1532 aa7.79□□□□□ -1.16
CDH9-203ENST00000505045 PREX1Q8TCU6 1659 aa7.79□□□□□ -1.16
CDH9-203ENST00000505045 MBD5Q9P267 1494 aa7.79□□□□□ -1.16
CDH9-203ENST00000505045 PRIM1P49642 420 aaKnown RBP7.79□□□□□ -1.16
CDH9-203ENST00000505045 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
CDH9-203ENST00000505045 TREML4Q6UXN2 200 aa7.79□□□□□ -1.16
CDH9-203ENST00000505045 CAMSAP2Q08AD1 1489 aa7.78□□□□□ -1.16
CDH9-203ENST00000505045 EN1Q05925 392 aaPredicted RBP7.78□□□□□ -1.16
CDH9-203ENST00000505045 LRRC9Q6ZRR7 1453 aa7.78□□□□□ -1.16
CDH9-203ENST00000505045 KIAA1107Q9UPP5 1409 aa7.78□□□□□ -1.16
CDH9-203ENST00000505045 HNRNPMP52272 730 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDH9-203ENST00000505045 ONECUT3O60422 494 aaPredicted RBP7.77□□□□□ -1.17
CDH9-203ENST00000505045 PROX2Q3B8N5 592 aa7.77□□□□□ -1.17
CDH9-203ENST00000505045 CFDP1Q9UEE9 299 aaPredicted RBP7.77□□□□□ -1.17
CDH9-203ENST00000505045 PLEKHH2Q8IVE3 1493 aa7.77□□□□□ -1.17
CDH9-203ENST00000505045 CLTCQ00610 1675 aaKnown RBP7.76□□□□□ -1.17
CDH9-203ENST00000505045 CEBPAP49715 358 aaPredicted RBP7.76□□□□□ -1.17
CDH9-203ENST00000505045 HSPA2P54652 639 aa7.76□□□□□ -1.17
CDH9-203ENST00000505045 NBR1Q14596 966 aa7.76□□□□□ -1.17
CDH9-203ENST00000505045 KCNV2Q8TDN2 545 aa7.76□□□□□ -1.17
CDH9-203ENST00000505045 ARHGEF1Q92888 912 aaKnown RBP7.75□□□□□ -1.17
CDH9-203ENST00000505045 RBM33Q96EV2 1170 aaKnown RBP7.75□□□□□ -1.17
CDH9-203ENST00000505045 RABGEF1Q9UJ41 708 aa7.75□□□□□ -1.17
CDH9-203ENST00000505045 MROH2AA6NES4 1674 aa7.75□□□□□ -1.17
CDH9-203ENST00000505045 STRCQ7RTU9 1775 aa7.75□□□□□ -1.17
CDH9-203ENST00000505045 A2MP01023 1474 aa7.75□□□□□ -1.17
CDH9-203ENST00000505045 OSBPP22059 807 aa7.75□□□□□ -1.17
CDH9-203ENST00000505045 KANK4Q5T7N3 995 aaPredicted RBP7.75□□□□□ -1.17
CDH9-203ENST00000505045 SPAG9O60271 1321 aaKnown RBP7.74□□□□□ -1.17
CDH9-203ENST00000505045 CCDC141Q6ZP82 1450 aa7.74□□□□□ -1.17
CDH9-203ENST00000505045 TSR1Q2NL82 804 aaKnown RBP7.74□□□□□ -1.17
CDH9-203ENST00000505045 MAP3K1Q13233 1512 aa7.74□□□□□ -1.17
CDH9-203ENST00000505045 ARHGEF5Q12774 1597 aa7.74□□□□□ -1.17
CDH9-203ENST00000505045 KCNC4Q03721 635 aa7.73□□□□□ -1.17
CDH9-203ENST00000505045 MYO3AQ8NEV4 1616 aa7.73□□□□□ -1.17
CDH9-203ENST00000505045 CROCC2H7BZ55 1655 aa7.73□□□□□ -1.17
CDH9-203ENST00000505045 GRXCR2A6NFK2 248 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms