RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 PCDHGC3Q9UN70 934 aa11.99□□□□□ -0.49
DEPDC1B-203ENST00000505017 TRIM66O15016 1216 aa11.98□□□□□ -0.49
DEPDC1B-203ENST00000505017 PRR20EP86478 221 aa11.98□□□□□ -0.49
DEPDC1B-203ENST00000505017 PRR20CP86479 221 aa11.98□□□□□ -0.49
DEPDC1B-203ENST00000505017 PRR20DP86480 221 aa11.98□□□□□ -0.49
DEPDC1B-203ENST00000505017 PRR20BP86481 221 aa11.98□□□□□ -0.49
DEPDC1B-203ENST00000505017 PRR20AP86496 221 aa11.98□□□□□ -0.49
DEPDC1B-203ENST00000505017 Q3C1V9 767 aa11.98□□□□□ -0.49
DEPDC1B-203ENST00000505017 GIGYF2Q6Y7W6 1299 aaKnown RBP11.98□□□□□ -0.49
DEPDC1B-203ENST00000505017 USB1Q9BQ65 265 aaKnown RBP11.97□□□□□ -0.49
DEPDC1B-203ENST00000505017 TNFRSF10AO00220 468 aa11.96□□□□□ -0.49
DEPDC1B-203ENST00000505017 TTLL12Q14166 644 aaPredicted RBP11.96□□□□□ -0.49
DEPDC1B-203ENST00000505017 PARP9Q8IXQ6 854 aa11.96□□□□□ -0.49
DEPDC1B-203ENST00000505017 SPIRE2Q8WWL2 714 aa11.96□□□□□ -0.49
DEPDC1B-203ENST00000505017 DXOO77932 396 aaKnown RBP11.95□□□□□ -0.5
DEPDC1B-203ENST00000505017 RPIAP49247 311 aa11.95□□□□□ -0.5
DEPDC1B-203ENST00000505017 MS4A1P11836 297 aa11.93□□□□□ -0.5
DEPDC1B-203ENST00000505017 NDUFV2P19404 249 aa11.93□□□□□ -0.5
DEPDC1B-203ENST00000505017 NUTM1Q86Y26 1132 aa11.93□□□□□ -0.5
DEPDC1B-203ENST00000505017 MOXD2PA6NHM9 499 aa11.91□□□□□ -0.5
DEPDC1B-203ENST00000505017 FOXC1Q12948 553 aa11.9□□□□□ -0.5
DEPDC1B-203ENST00000505017 AK7Q96M32 723 aa11.9□□□□□ -0.5
DEPDC1B-203ENST00000505017 FDX1P10109 184 aa11.89□□□□□ -0.51
DEPDC1B-203ENST00000505017 BEGAINQ9BUH8 593 aa11.89□□□□□ -0.51
DEPDC1B-203ENST00000505017 MYT1Q01538 1121 aa11.88□□□□□ -0.51
DEPDC1B-203ENST00000505017 SLC24A3Q9HC58 644 aa11.88□□□□□ -0.51
DEPDC1B-203ENST00000505017 CD2BP2O95400 341 aaKnown RBP11.86□□□□□ -0.51
DEPDC1B-203ENST00000505017 TOR4AQ9NXH8 423 aa11.86□□□□□ -0.51
DEPDC1B-203ENST00000505017 TRIM32Q13049 653 aa11.85□□□□□ -0.51
DEPDC1B-203ENST00000505017 RETREG3Q86VR2 466 aa11.85□□□□□ -0.51
DEPDC1B-203ENST00000505017 DGAT1O75907 488 aa11.84□□□□□ -0.51
DEPDC1B-203ENST00000505017 JUNDP17535 347 aa11.84□□□□□ -0.51
DEPDC1B-203ENST00000505017 TBC1D2Q9BYX2 928 aa11.84□□□□□ -0.51
DEPDC1B-203ENST00000505017 PDE4DQ08499 809 aa11.83□□□□□ -0.52
DEPDC1B-203ENST00000505017 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
DEPDC1B-203ENST00000505017 FAM187AA6NFU0 413 aa11.82□□□□□ -0.52
DEPDC1B-203ENST00000505017 PKDCCQ504Y2 493 aa11.82□□□□□ -0.52
DEPDC1B-203ENST00000505017 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
DEPDC1B-203ENST00000505017 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
DEPDC1B-203ENST00000505017 SKOR1P84550 965 aa11.81□□□□□ -0.52
DEPDC1B-203ENST00000505017 CCDC24Q8N4L8 307 aa11.81□□□□□ -0.52
DEPDC1B-203ENST00000505017 ZBTB24O43167 697 aaPredicted RBP11.8□□□□□ -0.52
DEPDC1B-203ENST00000505017 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
DEPDC1B-203ENST00000505017 POTECB2RU33 542 aa11.79□□□□□ -0.52
DEPDC1B-203ENST00000505017 WNT7AO00755 349 aa11.78□□□□□ -0.52
DEPDC1B-203ENST00000505017 ST8SIA5O15466 376 aa11.78□□□□□ -0.52
DEPDC1B-203ENST00000505017 MRGPRX2Q96LB1 330 aa11.77□□□□□ -0.53
DEPDC1B-203ENST00000505017 SPTLC1O15269 473 aa11.76□□□□□ -0.53
DEPDC1B-203ENST00000505017 GJA5P36382 358 aa11.76□□□□□ -0.53
DEPDC1B-203ENST00000505017 PRR7Q8TB68 274 aa11.76□□□□□ -0.53
DEPDC1B-203ENST00000505017 NUDT12Q9BQG2 462 aa11.76□□□□□ -0.53
DEPDC1B-203ENST00000505017 MTMR2Q13614 643 aa11.75□□□□□ -0.53
DEPDC1B-203ENST00000505017 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
DEPDC1B-203ENST00000505017 LIMD1Q9UGP4 676 aa11.74□□□□□ -0.53
DEPDC1B-203ENST00000505017 DACH1Q9UI36 760 aa11.74□□□□□ -0.53
DEPDC1B-203ENST00000505017 CFAP99D6REC4 459 aa11.73□□□□□ -0.53
DEPDC1B-203ENST00000505017 SLC24A1O60721 1099 aa11.73□□□□□ -0.53
DEPDC1B-203ENST00000505017 AVPP01185 164 aa11.73□□□□□ -0.53
DEPDC1B-203ENST00000505017 SMPD1P17405 629 aa11.73□□□□□ -0.53
DEPDC1B-203ENST00000505017 HRCP23327 699 aa11.73□□□□□ -0.53
DEPDC1B-203ENST00000505017 CYP4X1Q8N118 509 aa11.73□□□□□ -0.53
DEPDC1B-203ENST00000505017 MYSM1Q5VVJ2 828 aa11.72□□□□□ -0.53
DEPDC1B-203ENST00000505017 ZNF787Q6DD87 383 aa11.72□□□□□ -0.53
DEPDC1B-203ENST00000505017 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
DEPDC1B-203ENST00000505017 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
DEPDC1B-203ENST00000505017 J3QL48 77 aa11.71□□□□□ -0.53
DEPDC1B-203ENST00000505017 CCNYL3P0C7X3 344 aa11.71□□□□□ -0.53
DEPDC1B-203ENST00000505017 PTPRNQ16849 979 aa11.71□□□□□ -0.53
DEPDC1B-203ENST00000505017 RC3H1Q5TC82 1133 aaKnown RBP11.71□□□□□ -0.53
DEPDC1B-203ENST00000505017 EVA1BQ9NVM1 165 aa11.71□□□□□ -0.53
DEPDC1B-203ENST00000505017 WNT7BP56706 349 aa11.7□□□□□ -0.54
DEPDC1B-203ENST00000505017 DESI1Q6ICB0 168 aa11.7□□□□□ -0.54
DEPDC1B-203ENST00000505017 CRIPAKQ8N1N5 446 aa11.7□□□□□ -0.54
DEPDC1B-203ENST00000505017 QPCTQ16769 361 aa11.69□□□□□ -0.54
DEPDC1B-203ENST00000505017 SNIP1Q8TAD8 396 aaKnown RBP11.69□□□□□ -0.54
DEPDC1B-203ENST00000505017 TTC24A2A3L6 582 aaPredicted RBP11.68□□□□□ -0.54
DEPDC1B-203ENST00000505017 SPDYE5A6NIY4 337 aa11.68□□□□□ -0.54
DEPDC1B-203ENST00000505017 DIXDC1Q155Q3 683 aa11.68□□□□□ -0.54
DEPDC1B-203ENST00000505017 SIAH2O43255 324 aa11.67□□□□□ -0.54
DEPDC1B-203ENST00000505017 SH3BP2P78314 561 aa11.67□□□□□ -0.54
DEPDC1B-203ENST00000505017 BCANQ96GW7 911 aa11.67□□□□□ -0.54
DEPDC1B-203ENST00000505017 CSPP1Q1MSJ5 1256 aa11.66□□□□□ -0.54
DEPDC1B-203ENST00000505017 LYPD8Q6UX82 237 aa11.66□□□□□ -0.54
DEPDC1B-203ENST00000505017 UNC93B1Q9H1C4 597 aa11.66□□□□□ -0.54
DEPDC1B-203ENST00000505017 PER1O15534 1290 aaPredicted RBP11.65□□□□□ -0.54
DEPDC1B-203ENST00000505017 KCNH2Q12809 1159 aa11.65□□□□□ -0.54
DEPDC1B-203ENST00000505017 PRPF38BQ5VTL8 546 aaKnown RBP11.65□□□□□ -0.54
DEPDC1B-203ENST00000505017 ZBTB3Q9H5J0 574 aa11.65□□□□□ -0.54
DEPDC1B-203ENST00000505017 GPBP1L1Q9HC44 474 aaPredicted RBP11.65□□□□□ -0.54
DEPDC1B-203ENST00000505017 LILRB3O75022 631 aa11.64□□□□□ -0.55
DEPDC1B-203ENST00000505017 SMCPP49901 116 aaPredicted RBP11.64□□□□□ -0.55
DEPDC1B-203ENST00000505017 HPS1Q92902 700 aa11.64□□□□□ -0.55
DEPDC1B-203ENST00000505017 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
DEPDC1B-203ENST00000505017 BAP1Q92560 729 aa11.63□□□□□ -0.55
DEPDC1B-203ENST00000505017 F12P00748 615 aaPredicted RBP11.62□□□□□ -0.55
DEPDC1B-203ENST00000505017 TUSC1Q2TAM9 212 aa11.62□□□□□ -0.55
DEPDC1B-203ENST00000505017 LINC01559Q495D7 138 aa11.62□□□□□ -0.55
DEPDC1B-203ENST00000505017 RTL5Q5HYW3 569 aaPredicted RBP11.62□□□□□ -0.55
DEPDC1B-203ENST00000505017 ZNF775Q96BV0 537 aaPredicted RBP11.62□□□□□ -0.55
DEPDC1B-203ENST00000505017 MAP10Q9P2G4 905 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms