RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CCER1Q8TC90 406 aaPredicted RBP14.01□□□□□ -0.17
NR1I3-220ENST00000505005 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
NR1I3-220ENST00000505005 TRAK1Q9UPV9 953 aa14.01□□□□□ -0.17
NR1I3-220ENST00000505005 ADGRB1O14514 1584 aa14□□□□□ -0.17
NR1I3-220ENST00000505005 CDC42BPGQ6DT37 1551 aa14□□□□□ -0.17
NR1I3-220ENST00000505005 HSPA1LP34931 641 aa13.99□□□□□ -0.17
NR1I3-220ENST00000505005 WAPLQ7Z5K2 1190 aa13.99□□□□□ -0.17
NR1I3-220ENST00000505005 LRRC59Q96AG4 307 aaKnown RBP13.99□□□□□ -0.17
NR1I3-220ENST00000505005 MST1RQ04912 1400 aa13.98□□□□□ -0.17
NR1I3-220ENST00000505005 ROCK2O75116 1388 aaKnown RBP13.98□□□□□ -0.17
NR1I3-220ENST00000505005 ROBO1Q9Y6N7 1651 aa13.98□□□□□ -0.17
NR1I3-220ENST00000505005 NPHP3Q7Z494 1330 aa13.97□□□□□ -0.17
NR1I3-220ENST00000505005 ASXL1Q8IXJ9 1541 aa13.97□□□□□ -0.17
NR1I3-220ENST00000505005 BRINP3Q76B58 766 aa13.97□□□□□ -0.17
NR1I3-220ENST00000505005 NALCNQ8IZF0 1738 aa13.97□□□□□ -0.17
NR1I3-220ENST00000505005 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
NR1I3-220ENST00000505005 ANKARQ7Z5J8 1434 aa13.97□□□□□ -0.17
NR1I3-220ENST00000505005 PSME1Q06323 249 aa13.96□□□□□ -0.17
NR1I3-220ENST00000505005 PPP4R3CPQ6ZMV5 832 aa13.96□□□□□ -0.17
NR1I3-220ENST00000505005 JCADQ9P266 1359 aa13.96□□□□□ -0.18
NR1I3-220ENST00000505005 CENPJQ9HC77 1338 aaPredicted RBP13.95□□□□□ -0.18
NR1I3-220ENST00000505005 ESCO1Q5FWF5 840 aa13.95□□□□□ -0.18
NR1I3-220ENST00000505005 SPATA31A6Q5VVP1 1343 aa13.94□□□□□ -0.18
NR1I3-220ENST00000505005 AHDC1Q5TGY3 1603 aaPredicted RBP13.94□□□□□ -0.18
NR1I3-220ENST00000505005 WASLO00401 505 aaPredicted RBP13.94□□□□□ -0.18
NR1I3-220ENST00000505005 CARD11Q9BXL7 1154 aa13.94□□□□□ -0.18
NR1I3-220ENST00000505005 GPRASP1Q5JY77 1395 aa13.94□□□□□ -0.18
NR1I3-220ENST00000505005 ADGRB2O60241 1585 aa13.93□□□□□ -0.18
NR1I3-220ENST00000505005 PHLPP1O60346 1717 aa13.93□□□□□ -0.18
NR1I3-220ENST00000505005 NBPF1Q3BBV0 1214 aa13.92□□□□□ -0.18
NR1I3-220ENST00000505005 TRPM1Q7Z4N2 1603 aa13.92□□□□□ -0.18
NR1I3-220ENST00000505005 KIF1AQ12756 1690 aa13.91□□□□□ -0.18
NR1I3-220ENST00000505005 EVC2Q86UK5 1308 aa13.91□□□□□ -0.18
NR1I3-220ENST00000505005 SAFB2Q14151 953 aaKnown RBP eCLIP13.91□□□□□ -0.18
NR1I3-220ENST00000505005 ARHGEF28Q8N1W1 1705 aaKnown RBP13.9□□□□□ -0.18
NR1I3-220ENST00000505005 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
NR1I3-220ENST00000505005 PUS7Q96PZ0 661 aaKnown RBP13.9□□□□□ -0.18
NR1I3-220ENST00000505005 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
NR1I3-220ENST00000505005 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
NR1I3-220ENST00000505005 PLEKHH1Q9ULM0 1364 aa13.9□□□□□ -0.18
NR1I3-220ENST00000505005 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
NR1I3-220ENST00000505005 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
NR1I3-220ENST00000505005 MINK1Q8N4C8 1332 aaPredicted RBP13.9□□□□□ -0.19
NR1I3-220ENST00000505005 BRD4O60885 1362 aaPredicted RBP13.89□□□□□ -0.19
NR1I3-220ENST00000505005 SBNO2Q9Y2G9 1366 aa13.89□□□□□ -0.19
NR1I3-220ENST00000505005 MSH5O43196 834 aa13.89□□□□□ -0.19
NR1I3-220ENST00000505005 CDCA8Q53HL2 280 aa13.88□□□□□ -0.19
NR1I3-220ENST00000505005 ORAI2Q96SN7 254 aa13.88□□□□□ -0.19
NR1I3-220ENST00000505005 NHSL1Q5SYE7 1610 aa13.88□□□□□ -0.19
NR1I3-220ENST00000505005 TULP4Q9NRJ4 1543 aa13.88□□□□□ -0.19
NR1I3-220ENST00000505005 SRPK2P78362 688 aaKnown RBP13.87□□□□□ -0.19
NR1I3-220ENST00000505005 CDK19Q9BWU1 502 aa13.87□□□□□ -0.19
NR1I3-220ENST00000505005 ITSN1Q15811 1721 aa13.87□□□□□ -0.19
NR1I3-220ENST00000505005 FOXO3O43524 673 aa13.86□□□□□ -0.19
NR1I3-220ENST00000505005 NBPF8Q3BBV2 869 aa13.86□□□□□ -0.19
NR1I3-220ENST00000505005 NGDNQ8NEJ9 315 aaKnown RBP13.86□□□□□ -0.19
NR1I3-220ENST00000505005 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
NR1I3-220ENST00000505005 KRT28Q7Z3Y7 464 aa13.85□□□□□ -0.19
NR1I3-220ENST00000505005 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
NR1I3-220ENST00000505005 HIRIP3Q9BW71 556 aaPredicted RBP13.85□□□□□ -0.19
NR1I3-220ENST00000505005 COL16A1Q07092 1604 aaPredicted RBP13.85□□□□□ -0.19
NR1I3-220ENST00000505005 SBNO1A3KN83 1393 aa13.84□□□□□ -0.19
NR1I3-220ENST00000505005 ARHGEF10O15013 1369 aa13.84□□□□□ -0.19
NR1I3-220ENST00000505005 ATAD2Q6PL18 1390 aa13.84□□□□□ -0.19
NR1I3-220ENST00000505005 NUTM2FA1L443 756 aa13.84□□□□□ -0.19
NR1I3-220ENST00000505005 SHPRHQ149N8 1683 aa13.84□□□□□ -0.19
NR1I3-220ENST00000505005 PLEKHG3A1L390 1219 aa13.83□□□□□ -0.2
NR1I3-220ENST00000505005 MEX3CQ5U5Q3 659 aaKnown RBP13.83□□□□□ -0.2
NR1I3-220ENST00000505005 DISP3Q9P2K9 1392 aa13.83□□□□□ -0.2
NR1I3-220ENST00000505005 ZNF772Q68DY9 489 aaPredicted RBP13.81□□□□□ -0.2
NR1I3-220ENST00000505005 QRICH2Q9H0J4 1663 aa13.81□□□□□ -0.2
NR1I3-220ENST00000505005 NINLQ9Y2I6 1382 aa13.81□□□□□ -0.2
NR1I3-220ENST00000505005 TMF1P82094 1093 aa13.8□□□□□ -0.2
NR1I3-220ENST00000505005 SPATA31A3Q5VYP0 1347 aa13.8□□□□□ -0.2
NR1I3-220ENST00000505005 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
NR1I3-220ENST00000505005 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
NR1I3-220ENST00000505005 PMFBP1Q8TBY8 1022 aa13.78□□□□□ -0.2
NR1I3-220ENST00000505005 POLR3AO14802 1390 aaPredicted RBP13.78□□□□□ -0.2
NR1I3-220ENST00000505005 PNPLA6Q8IY17 1366 aa13.78□□□□□ -0.2
NR1I3-220ENST00000505005 ATP7BP35670 1465 aa13.78□□□□□ -0.2
NR1I3-220ENST00000505005 RGPD8O14715 1765 aaPredicted RBP13.78□□□□□ -0.2
NR1I3-220ENST00000505005 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.21
NR1I3-220ENST00000505005 MED1Q15648 1581 aaPredicted RBP13.77□□□□□ -0.21
NR1I3-220ENST00000505005 TNS3Q68CZ2 1445 aa13.77□□□□□ -0.21
NR1I3-220ENST00000505005 PXDNQ92626 1479 aa13.77□□□□□ -0.21
NR1I3-220ENST00000505005 TERF2IPQ9NYB0 399 aa13.77□□□□□ -0.21
NR1I3-220ENST00000505005 PPIP5K1Q6PFW1 1433 aa13.76□□□□□ -0.21
NR1I3-220ENST00000505005 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
NR1I3-220ENST00000505005 HDGFL2Q7Z4V5 671 aaPredicted RBP13.76□□□□□ -0.21
NR1I3-220ENST00000505005 USP47Q96K76 1375 aa13.75□□□□□ -0.21
NR1I3-220ENST00000505005 ACEP12821 1306 aa13.75□□□□□ -0.21
NR1I3-220ENST00000505005 PRR36Q9H6K5 1346 aa13.75□□□□□ -0.21
NR1I3-220ENST00000505005 PAK3O75914 559 aaPredicted RBP13.75□□□□□ -0.21
NR1I3-220ENST00000505005 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
NR1I3-220ENST00000505005 NLRP13Q86W25 1043 aa13.75□□□□□ -0.21
NR1I3-220ENST00000505005 CABP2Q9NPB3 220 aa13.75□□□□□ -0.21
NR1I3-220ENST00000505005 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
NR1I3-220ENST00000505005 COL22A1Q8NFW1 1626 aaPredicted RBP13.75□□□□□ -0.21
NR1I3-220ENST00000505005 NUTM2BA6NNL0 878 aaPredicted RBP13.74□□□□□ -0.21
NR1I3-220ENST00000505005 NUTM2EB1AL46 878 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms