RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 IPO9Q96P70 1041 aaKnown RBP12.58□□□□□ -0.4
CSF1R-203ENST00000504875 ERVK-7P63135 1459 aa12.57□□□□□ -0.4
CSF1R-203ENST00000504875 RUNDC1Q96C34 613 aa12.57□□□□□ -0.4
CSF1R-203ENST00000504875 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
CSF1R-203ENST00000504875 CEP152O94986 1710 aa12.57□□□□□ -0.4
CSF1R-203ENST00000504875 COG6Q9Y2V7 657 aa12.57□□□□□ -0.4
CSF1R-203ENST00000504875 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
CSF1R-203ENST00000504875 KIDINS220Q9ULH0 1771 aa12.56□□□□□ -0.4
CSF1R-203ENST00000504875 KDM5AP29375 1690 aaKnown RBP12.55□□□□□ -0.4
CSF1R-203ENST00000504875 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
CSF1R-203ENST00000504875 MAP3K4Q9Y6R4 1608 aa12.55□□□□□ -0.4
CSF1R-203ENST00000504875 RNF17Q9BXT8 1623 aaKnown RBP12.55□□□□□ -0.4
CSF1R-203ENST00000504875 WWC1Q8IX03 1113 aa12.55□□□□□ -0.4
CSF1R-203ENST00000504875 PANK1Q8TE04 598 aa12.55□□□□□ -0.4
CSF1R-203ENST00000504875 YEATS2Q9ULM3 1422 aa12.55□□□□□ -0.4
CSF1R-203ENST00000504875 SYNMO15061 1565 aa12.55□□□□□ -0.4
CSF1R-203ENST00000504875 MYOM2P54296 1465 aa12.54□□□□□ -0.4
CSF1R-203ENST00000504875 ZMYM4Q5VZL5 1548 aa12.54□□□□□ -0.4
CSF1R-203ENST00000504875 DMRT2Q9Y5R5 561 aa12.54□□□□□ -0.4
CSF1R-203ENST00000504875 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
CSF1R-203ENST00000504875 MLH3Q9UHC1 1453 aa12.54□□□□□ -0.4
CSF1R-203ENST00000504875 CENPQQ7L2Z9 268 aaPredicted RBP12.54□□□□□ -0.4
CSF1R-203ENST00000504875 FTSJ3Q8IY81 847 aaKnown RBP12.54□□□□□ -0.4
CSF1R-203ENST00000504875 ABCA6Q8N139 1617 aa12.54□□□□□ -0.4
CSF1R-203ENST00000504875 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
CSF1R-203ENST00000504875 HECW2Q9P2P5 1572 aa12.53□□□□□ -0.4
CSF1R-203ENST00000504875 IQGAP1P46940 1657 aa12.53□□□□□ -0.4
CSF1R-203ENST00000504875 WAPLQ7Z5K2 1190 aa12.52□□□□□ -0.4
CSF1R-203ENST00000504875 CABP1Q9NZU7 370 aa12.52□□□□□ -0.4
CSF1R-203ENST00000504875 DEPDC5O75140 1603 aa12.52□□□□□ -0.4
CSF1R-203ENST00000504875 PKNOX2Q96KN3 472 aa12.52□□□□□ -0.41
CSF1R-203ENST00000504875 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
CSF1R-203ENST00000504875 NPC1L1Q9UHC9 1359 aa12.52□□□□□ -0.41
CSF1R-203ENST00000504875 SOX12O15370 315 aa12.51□□□□□ -0.41
CSF1R-203ENST00000504875 MYH16Q9H6N6 1097 aa12.51□□□□□ -0.41
CSF1R-203ENST00000504875 MS4A1P11836 297 aa12.5□□□□□ -0.41
CSF1R-203ENST00000504875 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
CSF1R-203ENST00000504875 BACH2Q9BYV9 841 aa12.5□□□□□ -0.41
CSF1R-203ENST00000504875 NEO1Q92859 1461 aa12.5□□□□□ -0.41
CSF1R-203ENST00000504875 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
CSF1R-203ENST00000504875 CFAP74Q9C0B2 1584 aa12.5□□□□□ -0.41
CSF1R-203ENST00000504875 MROH1Q8NDA8 1641 aa12.49□□□□□ -0.41
CSF1R-203ENST00000504875 NKTRP30414 1462 aaKnown RBP12.49□□□□□ -0.41
CSF1R-203ENST00000504875 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
CSF1R-203ENST00000504875 ABCC3O15438 1527 aa12.49□□□□□ -0.41
CSF1R-203ENST00000504875 SMC4Q9NTJ3 1288 aa12.49□□□□□ -0.41
CSF1R-203ENST00000504875 FBLN1P23142 703 aa12.49□□□□□ -0.41
CSF1R-203ENST00000504875 TXNDC2Q86VQ3 553 aa12.48□□□□□ -0.41
CSF1R-203ENST00000504875 DIAPH1O60610 1272 aaKnown RBP12.48□□□□□ -0.41
CSF1R-203ENST00000504875 POLR3AO14802 1390 aaPredicted RBP12.48□□□□□ -0.41
CSF1R-203ENST00000504875 INSRP06213 1382 aa12.48□□□□□ -0.41
CSF1R-203ENST00000504875 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
CSF1R-203ENST00000504875 MROH2AA6NES4 1674 aa12.48□□□□□ -0.41
CSF1R-203ENST00000504875 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
CSF1R-203ENST00000504875 ZNF521Q96K83 1311 aa12.47□□□□□ -0.41
CSF1R-203ENST00000504875 RIPK4P57078 832 aa12.47□□□□□ -0.41
CSF1R-203ENST00000504875 ANKRD36BQ8N2N9 1353 aa12.47□□□□□ -0.41
CSF1R-203ENST00000504875 HMOX1P09601 288 aa12.47□□□□□ -0.41
CSF1R-203ENST00000504875 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
CSF1R-203ENST00000504875 ADGRB3O60242 1522 aa12.46□□□□□ -0.41
CSF1R-203ENST00000504875 BRPF3Q9ULD4 1205 aa12.46□□□□□ -0.42
CSF1R-203ENST00000504875 ATAD2Q6PL18 1390 aa12.45□□□□□ -0.42
CSF1R-203ENST00000504875 ITPRIPQ8IWB1 547 aa12.45□□□□□ -0.42
CSF1R-203ENST00000504875 A0A1W2PP64 1363 aa12.45□□□□□ -0.42
CSF1R-203ENST00000504875 HDGFP51858 240 aaKnown RBP12.45□□□□□ -0.42
CSF1R-203ENST00000504875 LMTK2Q8IWU2 1503 aa12.45□□□□□ -0.42
CSF1R-203ENST00000504875 FAM161AQ3B820 660 aa12.44□□□□□ -0.42
CSF1R-203ENST00000504875 TSPOAP1O95153 1857 aa12.44□□□□□ -0.42
CSF1R-203ENST00000504875 FYB1O15117 783 aa12.44□□□□□ -0.42
CSF1R-203ENST00000504875 EXOSC9Q06265 439 aaKnown RBP12.44□□□□□ -0.42
CSF1R-203ENST00000504875 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
CSF1R-203ENST00000504875 ELL2O00472 640 aaPredicted RBP12.44□□□□□ -0.42
CSF1R-203ENST00000504875 FRMPD1Q5SYB0 1578 aa12.44□□□□□ -0.42
CSF1R-203ENST00000504875 WDR63Q8IWG1 891 aa12.43□□□□□ -0.42
CSF1R-203ENST00000504875 TNNQ9UQP3 1299 aa12.43□□□□□ -0.42
CSF1R-203ENST00000504875 RARSP54136 660 aaKnown RBP12.43□□□□□ -0.42
CSF1R-203ENST00000504875 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
CSF1R-203ENST00000504875 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
CSF1R-203ENST00000504875 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
CSF1R-203ENST00000504875 KIAA1210Q9ULL0 1709 aa12.42□□□□□ -0.42
CSF1R-203ENST00000504875 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
CSF1R-203ENST00000504875 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
CSF1R-203ENST00000504875 UPF2Q9HAU5 1272 aaKnown RBP12.42□□□□□ -0.42
CSF1R-203ENST00000504875 YTHDC2Q9H6S0 1430 aaKnown RBP12.41□□□□□ -0.42
CSF1R-203ENST00000504875 GLIPR1L2Q4G1C9 344 aa12.41□□□□□ -0.42
CSF1R-203ENST00000504875 PMFBP1Q8TBY8 1022 aa12.41□□□□□ -0.42
CSF1R-203ENST00000504875 QRICH2Q9H0J4 1663 aa12.41□□□□□ -0.42
CSF1R-203ENST00000504875 IGHDP01880 384 aa12.41□□□□□ -0.42
CSF1R-203ENST00000504875 COG3Q96JB2 828 aa12.4□□□□□ -0.42
CSF1R-203ENST00000504875 DIP2CQ9Y2E4 1556 aa12.4□□□□□ -0.42
CSF1R-203ENST00000504875 DZIP1LQ8IYY4 767 aaKnown RBP12.4□□□□□ -0.42
CSF1R-203ENST00000504875 RWDD1Q9H446 243 aaPredicted RBP12.4□□□□□ -0.42
CSF1R-203ENST00000504875 CAMSAP1Q5T5Y3 1602 aa12.4□□□□□ -0.42
CSF1R-203ENST00000504875 TRMT2AQ8IZ69 625 aaKnown RBP12.4□□□□□ -0.43
CSF1R-203ENST00000504875 MYOM1P52179 1685 aa12.39□□□□□ -0.43
CSF1R-203ENST00000504875 NME9Q86XW9 330 aa12.39□□□□□ -0.43
CSF1R-203ENST00000504875 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.39□□□□□ -0.43
CSF1R-203ENST00000504875 NSD2O96028 1365 aa12.39□□□□□ -0.43
CSF1R-203ENST00000504875 NRXN1Q9ULB1 1477 aa12.39□□□□□ -0.43
CSF1R-203ENST00000504875 GLI2P10070 1586 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms