RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ROBO2Q9HCK4 1378 aa10.52□□□□□ -0.73
NPIPB3-203ENST00000504841 PTCH1Q13635 1447 aa10.51□□□□□ -0.73
NPIPB3-203ENST00000504841 DCAF8L1A6NGE4 600 aa10.51□□□□□ -0.73
NPIPB3-203ENST00000504841 SOS2Q07890 1332 aaPredicted RBP10.51□□□□□ -0.73
NPIPB3-203ENST00000504841 XPCQ01831 940 aaPredicted RBP10.5□□□□□ -0.73
NPIPB3-203ENST00000504841 ZRANB1Q9UGI0 708 aa10.5□□□□□ -0.73
NPIPB3-203ENST00000504841 LAMC1P11047 1609 aa10.5□□□□□ -0.73
NPIPB3-203ENST00000504841 ATRNO75882 1429 aa10.5□□□□□ -0.73
NPIPB3-203ENST00000504841 KIF1BO60333 1816 aa10.49□□□□□ -0.73
NPIPB3-203ENST00000504841 ESCO1Q5FWF5 840 aa10.48□□□□□ -0.73
NPIPB3-203ENST00000504841 FNBP4Q8N3X1 1017 aaPredicted RBP10.48□□□□□ -0.73
NPIPB3-203ENST00000504841 MYOM2P54296 1465 aa10.48□□□□□ -0.73
NPIPB3-203ENST00000504841 NUTM2FA1L443 756 aa10.47□□□□□ -0.73
NPIPB3-203ENST00000504841 COL22A1Q8NFW1 1626 aaPredicted RBP10.47□□□□□ -0.73
NPIPB3-203ENST00000504841 VGFO15240 615 aaPredicted RBP10.46□□□□□ -0.73
NPIPB3-203ENST00000504841 NPHP3Q7Z494 1330 aa10.46□□□□□ -0.73
NPIPB3-203ENST00000504841 HFM1A2PYH4 1435 aa10.46□□□□□ -0.74
NPIPB3-203ENST00000504841 CDC42BPGQ6DT37 1551 aa10.45□□□□□ -0.74
NPIPB3-203ENST00000504841 FOXO3O43524 673 aa10.45□□□□□ -0.74
NPIPB3-203ENST00000504841 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
NPIPB3-203ENST00000504841 BCL9LQ86UU0 1499 aa10.44□□□□□ -0.74
NPIPB3-203ENST00000504841 PXDNQ92626 1479 aa10.44□□□□□ -0.74
NPIPB3-203ENST00000504841 PRAG1Q86YV5 1406 aa10.44□□□□□ -0.74
NPIPB3-203ENST00000504841 GJD4Q96KN9 370 aaPredicted RBP10.44□□□□□ -0.74
NPIPB3-203ENST00000504841 STK26Q9P289 416 aa10.44□□□□□ -0.74
NPIPB3-203ENST00000504841 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
NPIPB3-203ENST00000504841 NAIPQ13075 1403 aa10.42□□□□□ -0.74
NPIPB3-203ENST00000504841 PPLO60437 1756 aa10.42□□□□□ -0.74
NPIPB3-203ENST00000504841 HAP1P54257 671 aaPredicted RBP10.42□□□□□ -0.74
NPIPB3-203ENST00000504841 RALGAPBQ86X10 1494 aa10.42□□□□□ -0.74
NPIPB3-203ENST00000504841 LRPPRCP42704 1394 aaKnown RBP10.41□□□□□ -0.74
NPIPB3-203ENST00000504841 GLI3P10071 1580 aa10.41□□□□□ -0.74
NPIPB3-203ENST00000504841 WAPLQ7Z5K2 1190 aa10.41□□□□□ -0.74
NPIPB3-203ENST00000504841 DEFB132Q7Z7B7 95 aa10.41□□□□□ -0.74
NPIPB3-203ENST00000504841 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
NPIPB3-203ENST00000504841 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
NPIPB3-203ENST00000504841 RPGRIP1LQ68CZ1 1315 aa10.4□□□□□ -0.74
NPIPB3-203ENST00000504841 ADGRF5Q8IZF2 1346 aa10.4□□□□□ -0.74
NPIPB3-203ENST00000504841 SF3B2Q13435 895 aaKnown RBP10.4□□□□□ -0.74
NPIPB3-203ENST00000504841 CCDC9Q9Y3X0 531 aaKnown RBP10.4□□□□□ -0.74
NPIPB3-203ENST00000504841 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.4□□□□□ -0.74
NPIPB3-203ENST00000504841 BLMP54132 1417 aaPredicted RBP10.4□□□□□ -0.75
NPIPB3-203ENST00000504841 PLEKHH1Q9ULM0 1364 aa10.39□□□□□ -0.75
NPIPB3-203ENST00000504841 A0A0G2JS52 829 aa10.39□□□□□ -0.75
NPIPB3-203ENST00000504841 MYT1Q01538 1121 aa10.39□□□□□ -0.75
NPIPB3-203ENST00000504841 UNC5CLQ8IV45 518 aa10.39□□□□□ -0.75
NPIPB3-203ENST00000504841 USP32Q8NFA0 1604 aa10.39□□□□□ -0.75
NPIPB3-203ENST00000504841 RRBP1Q9P2E9 1410 aaKnown RBP10.39□□□□□ -0.75
NPIPB3-203ENST00000504841 SLIT2O94813 1529 aa10.38□□□□□ -0.75
NPIPB3-203ENST00000504841 SPATA31A3Q5VYP0 1347 aa10.38□□□□□ -0.75
NPIPB3-203ENST00000504841 RGL3Q3MIN7 710 aa10.38□□□□□ -0.75
NPIPB3-203ENST00000504841 TMEM132EQ6IEE7 984 aa10.38□□□□□ -0.75
NPIPB3-203ENST00000504841 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
NPIPB3-203ENST00000504841 BRWD3Q6RI45 1802 aa10.37□□□□□ -0.75
NPIPB3-203ENST00000504841 CCDC144AA2RUR9 1427 aa10.37□□□□□ -0.75
NPIPB3-203ENST00000504841 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
NPIPB3-203ENST00000504841 KRT28Q7Z3Y7 464 aa10.37□□□□□ -0.75
NPIPB3-203ENST00000504841 SEPT12Q8IYM1 358 aa10.37□□□□□ -0.75
NPIPB3-203ENST00000504841 CABLES1Q8TDN4 633 aa10.37□□□□□ -0.75
NPIPB3-203ENST00000504841 FMN2Q9NZ56 1722 aa10.37□□□□□ -0.75
NPIPB3-203ENST00000504841 TECPR2O15040 1411 aa10.36□□□□□ -0.75
NPIPB3-203ENST00000504841 KNDC1Q76NI1 1749 aa10.36□□□□□ -0.75
NPIPB3-203ENST00000504841 PLCH1Q4KWH8 1693 aa10.35□□□□□ -0.75
NPIPB3-203ENST00000504841 TNS3Q68CZ2 1445 aa10.35□□□□□ -0.75
NPIPB3-203ENST00000504841 PSDA5PKW4 1024 aaPredicted RBP10.35□□□□□ -0.75
NPIPB3-203ENST00000504841 IFT172Q9UG01 1749 aa10.34□□□□□ -0.75
NPIPB3-203ENST00000504841 SAFB2Q14151 953 aaKnown RBP eCLIP10.34□□□□□ -0.75
NPIPB3-203ENST00000504841 ABCC11Q96J66 1382 aa10.34□□□□□ -0.75
NPIPB3-203ENST00000504841 YTHDC2Q9H6S0 1430 aaKnown RBP10.33□□□□□ -0.76
NPIPB3-203ENST00000504841 VPS72Q15906 364 aa10.33□□□□□ -0.76
NPIPB3-203ENST00000504841 KRT27Q7Z3Y8 459 aa10.33□□□□□ -0.76
NPIPB3-203ENST00000504841 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
NPIPB3-203ENST00000504841 ANKRD30BQ9BXX2 1392 aa10.33□□□□□ -0.76
NPIPB3-203ENST00000504841 RGPD8O14715 1765 aaPredicted RBP10.33□□□□□ -0.76
NPIPB3-203ENST00000504841 ABCA3Q99758 1704 aa10.33□□□□□ -0.76
NPIPB3-203ENST00000504841 PIK3C2GO75747 1445 aa10.33□□□□□ -0.76
NPIPB3-203ENST00000504841 PSME1Q06323 249 aa10.32□□□□□ -0.76
NPIPB3-203ENST00000504841 LRP5O75197 1615 aa10.32□□□□□ -0.76
NPIPB3-203ENST00000504841 SPATA31E1Q6ZUB1 1445 aa10.32□□□□□ -0.76
NPIPB3-203ENST00000504841 NWD2Q9ULI1 1742 aa10.31□□□□□ -0.76
NPIPB3-203ENST00000504841 BAG6P46379 1132 aa10.31□□□□□ -0.76
NPIPB3-203ENST00000504841 PMFBP1Q8TBY8 1022 aa10.31□□□□□ -0.76
NPIPB3-203ENST00000504841 ARHGEF10O15013 1369 aa10.3□□□□□ -0.76
NPIPB3-203ENST00000504841 FAM98CQ17RN3 349 aaKnown RBP10.3□□□□□ -0.76
NPIPB3-203ENST00000504841 NRXN1Q9ULB1 1477 aa10.3□□□□□ -0.76
NPIPB3-203ENST00000504841 SBNO1A3KN83 1393 aa10.29□□□□□ -0.76
NPIPB3-203ENST00000504841 FAM83GA6ND36 823 aa10.29□□□□□ -0.76
NPIPB3-203ENST00000504841 FAM182BQ5T319 152 aa10.29□□□□□ -0.76
NPIPB3-203ENST00000504841 PRAM1Q96QH2 718 aa10.29□□□□□ -0.76
NPIPB3-203ENST00000504841 EP400Q96L91 3159 aa10.29□□□□□ -0.76
NPIPB3-203ENST00000504841 NRAPQ86VF7 1730 aa10.28□□□□□ -0.76
NPIPB3-203ENST00000504841 HRCP23327 699 aa10.28□□□□□ -0.76
NPIPB3-203ENST00000504841 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
NPIPB3-203ENST00000504841 CFAP70Q5T0N1 1121 aa10.28□□□□□ -0.76
NPIPB3-203ENST00000504841 MPHOSPH9Q99550 1183 aa10.28□□□□□ -0.76
NPIPB3-203ENST00000504841 BTG4Q9NY30 223 aa10.28□□□□□ -0.76
NPIPB3-203ENST00000504841 DHX57Q6P158 1386 aaKnown RBP10.27□□□□□ -0.76
NPIPB3-203ENST00000504841 SRCAPQ6ZRS2 3230 aa10.27□□□□□ -0.77
NPIPB3-203ENST00000504841 ONECUT3O60422 494 aaPredicted RBP10.27□□□□□ -0.77
NPIPB3-203ENST00000504841 CACNB1Q02641 598 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms