RNA–Protein interactions for RNA: ENST00000504824.5

SDHA-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-205ENST00000504824 LAMC1P11047 1609 aa25.34■■□□□ 1.65
SDHA-205ENST00000504824 CDC42BPGQ6DT37 1551 aa25.33■■□□□ 1.65
SDHA-205ENST00000504824 TMEM132EQ6IEE7 984 aa25.32■■□□□ 1.64
SDHA-205ENST00000504824 PIK3C2GO75747 1445 aa25.31■■□□□ 1.64
SDHA-205ENST00000504824 LRPPRCP42704 1394 aaKnown RBP25.3■■□□□ 1.64
SDHA-205ENST00000504824 SOS2Q07890 1332 aaPredicted RBP25.3■■□□□ 1.64
SDHA-205ENST00000504824 ESCO1Q5FWF5 840 aa25.29■■□□□ 1.64
SDHA-205ENST00000504824 C14orf93Q9H972 538 aaKnown RBP25.29■■□□□ 1.64
SDHA-205ENST00000504824 NPHP3Q7Z494 1330 aa25.29■■□□□ 1.64
SDHA-205ENST00000504824 ADAMTS2O95450 1211 aa25.29■■□□□ 1.64
SDHA-205ENST00000504824 NGLY1Q96IV0 654 aa25.29■■□□□ 1.64
SDHA-205ENST00000504824 CDK12Q9NYV4 1490 aaPredicted RBP25.28■■□□□ 1.64
SDHA-205ENST00000504824 TECPR2O15040 1411 aa25.28■■□□□ 1.64
SDHA-205ENST00000504824 KNDC1Q76NI1 1749 aa25.27■■□□□ 1.64
SDHA-205ENST00000504824 ABCC11Q96J66 1382 aa25.26■■□□□ 1.63
SDHA-205ENST00000504824 CFAP70Q5T0N1 1121 aa25.26■■□□□ 1.63
SDHA-205ENST00000504824 MYOM2P54296 1465 aa25.25■■□□□ 1.63
SDHA-205ENST00000504824 WAPLQ7Z5K2 1190 aa25.25■■□□□ 1.63
SDHA-205ENST00000504824 NRXN1Q9ULB1 1477 aa25.24■■□□□ 1.63
SDHA-205ENST00000504824 QTRT2Q9H974 415 aaKnown RBP25.24■■□□□ 1.63
SDHA-205ENST00000504824 RBM6P78332 1123 aaKnown RBP25.23■■□□□ 1.63
SDHA-205ENST00000504824 DCAF11Q8TEB1 546 aa25.23■■□□□ 1.63
SDHA-205ENST00000504824 KDM2AQ9Y2K7 1162 aa25.23■■□□□ 1.63
SDHA-205ENST00000504824 YTHDC2Q9H6S0 1430 aaKnown RBP25.23■■□□□ 1.63
SDHA-205ENST00000504824 NUTM2FA1L443 756 aa25.21■■□□□ 1.63
SDHA-205ENST00000504824 DHX57Q6P158 1386 aaKnown RBP25.21■■□□□ 1.63
SDHA-205ENST00000504824 UPF1Q92900 1129 aaKnown RBP eCLIP25.2■■□□□ 1.63
SDHA-205ENST00000504824 STAC3Q96MF2 364 aa25.2■■□□□ 1.63
SDHA-205ENST00000504824 SIRT1Q96EB6 747 aa25.2■■□□□ 1.62
SDHA-205ENST00000504824 COL22A1Q8NFW1 1626 aaPredicted RBP25.19■■□□□ 1.62
SDHA-205ENST00000504824 FOXO3O43524 673 aa25.19■■□□□ 1.62
SDHA-205ENST00000504824 PLEKHH1Q9ULM0 1364 aa25.18■■□□□ 1.62
SDHA-205ENST00000504824 USP21Q9UK80 565 aa25.18■■□□□ 1.62
SDHA-205ENST00000504824 PXDNQ92626 1479 aa25.17■■□□□ 1.62
SDHA-205ENST00000504824 FMN2Q9NZ56 1722 aa25.16■■□□□ 1.62
SDHA-205ENST00000504824 XPCQ01831 940 aaPredicted RBP25.16■■□□□ 1.62
SDHA-205ENST00000504824 RGS12O14924 1447 aa25.15■■□□□ 1.62
SDHA-205ENST00000504824 KIF1AQ12756 1690 aa25.15■■□□□ 1.62
SDHA-205ENST00000504824 TRPC5Q9UL62 973 aaPredicted RBP25.15■■□□□ 1.62
SDHA-205ENST00000504824 FNBP4Q8N3X1 1017 aaPredicted RBP25.11■■□□□ 1.61
SDHA-205ENST00000504824 PRAM1Q96QH2 718 aa25.1■■□□□ 1.61
SDHA-205ENST00000504824 POGKQ9P215 609 aa25.1■■□□□ 1.61
SDHA-205ENST00000504824 SAFB2Q14151 953 aaKnown RBP eCLIP25.08■■□□□ 1.61
SDHA-205ENST00000504824 TRAK1Q9UPV9 953 aa25.08■■□□□ 1.61
SDHA-205ENST00000504824 MARF1Q9Y4F3 1742 aaKnown RBP25.08■■□□□ 1.61
SDHA-205ENST00000504824 PSME1Q06323 249 aa25.06■■□□□ 1.6
SDHA-205ENST00000504824 KRT28Q7Z3Y7 464 aa25.06■■□□□ 1.6
SDHA-205ENST00000504824 PHF8Q9UPP1 1060 aa25.06■■□□□ 1.6
SDHA-205ENST00000504824 SPATA31A3Q5VYP0 1347 aa25.05■■□□□ 1.6
SDHA-205ENST00000504824 HAP1P54257 671 aaPredicted RBP25.05■■□□□ 1.6
SDHA-205ENST00000504824 ATRNO75882 1429 aa25.05■■□□□ 1.6
SDHA-205ENST00000504824 ATAD2Q6PL18 1390 aa25.05■■□□□ 1.6
SDHA-205ENST00000504824 ADGRB1O14514 1584 aa25.05■■□□□ 1.6
SDHA-205ENST00000504824 DLC1Q96QB1 1528 aa25.05■■□□□ 1.6
SDHA-205ENST00000504824 RGPD8O14715 1765 aaPredicted RBP25.02■■□□□ 1.6
SDHA-205ENST00000504824 TNS3Q68CZ2 1445 aa25.01■■□□□ 1.59
SDHA-205ENST00000504824 ANKARQ7Z5J8 1434 aa24.99■■□□□ 1.59
SDHA-205ENST00000504824 LMOD2Q6P5Q4 547 aa24.99■■□□□ 1.59
SDHA-205ENST00000504824 BCL9LQ86UU0 1499 aa24.99■■□□□ 1.59
SDHA-205ENST00000504824 EIF3AQ14152 1382 aaKnown RBP24.98■■□□□ 1.59
SDHA-205ENST00000504824 ADGRB2O60241 1585 aa24.97■■□□□ 1.59
SDHA-205ENST00000504824 SIN3AQ96ST3 1273 aa24.97■■□□□ 1.59
SDHA-205ENST00000504824 USP32Q8NFA0 1604 aa24.96■■□□□ 1.59
SDHA-205ENST00000504824 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.96■■□□□ 1.59
SDHA-205ENST00000504824 SBNO1A3KN83 1393 aa24.96■■□□□ 1.59
SDHA-205ENST00000504824 ARHGEF10O15013 1369 aa24.96■■□□□ 1.59
SDHA-205ENST00000504824 TRIM26Q12899 539 aaPredicted RBP24.95■■□□□ 1.59
SDHA-205ENST00000504824 GJD4Q96KN9 370 aaPredicted RBP24.95■■□□□ 1.59
SDHA-205ENST00000504824 HIRIP3Q9BW71 556 aaPredicted RBP24.95■■□□□ 1.59
SDHA-205ENST00000504824 MINK1Q8N4C8 1332 aaPredicted RBP24.95■■□□□ 1.58
SDHA-205ENST00000504824 PLEKHG5O94827 1062 aa24.95■■□□□ 1.58
SDHA-205ENST00000504824 UNC5CLQ8IV45 518 aa24.95■■□□□ 1.58
SDHA-205ENST00000504824 NEUROD1Q13562 356 aa24.94■■□□□ 1.58
SDHA-205ENST00000504824 PMFBP1Q8TBY8 1022 aa24.94■■□□□ 1.58
SDHA-205ENST00000504824 L3MBTL2Q969R5 705 aa24.94■■□□□ 1.58
SDHA-205ENST00000504824 SLIT2O94813 1529 aa24.93■■□□□ 1.58
SDHA-205ENST00000504824 GPRASP1Q5JY77 1395 aa24.91■■□□□ 1.58
SDHA-205ENST00000504824 NBPF1Q3BBV0 1214 aa24.91■■□□□ 1.58
SDHA-205ENST00000504824 CABLES1Q8TDN4 633 aa24.9■■□□□ 1.58
SDHA-205ENST00000504824 WASLO00401 505 aaPredicted RBP24.89■■□□□ 1.58
SDHA-205ENST00000504824 KIAA1210Q9ULL0 1709 aa24.89■■□□□ 1.57
SDHA-205ENST00000504824 TULP4Q9NRJ4 1543 aa24.88■■□□□ 1.57
SDHA-205ENST00000504824 CCDC9Q9Y3X0 531 aaKnown RBP24.87■■□□□ 1.57
SDHA-205ENST00000504824 RALGAPBQ86X10 1494 aa24.87■■□□□ 1.57
SDHA-205ENST00000504824 ABCA3Q99758 1704 aa24.86■■□□□ 1.57
SDHA-205ENST00000504824 CCDC125Q86Z20 511 aa24.85■■□□□ 1.57
SDHA-205ENST00000504824 NGDNQ8NEJ9 315 aaKnown RBP24.85■■□□□ 1.57
SDHA-205ENST00000504824 NWD2Q9ULI1 1742 aa24.85■■□□□ 1.57
SDHA-205ENST00000504824 PLCH1Q4KWH8 1693 aa24.85■■□□□ 1.57
SDHA-205ENST00000504824 GLI3P10071 1580 aa24.84■■□□□ 1.57
SDHA-205ENST00000504824 ARHGEF28Q8N1W1 1705 aaKnown RBP24.84■■□□□ 1.57
SDHA-205ENST00000504824 PRR36Q9H6K5 1346 aa24.83■■□□□ 1.57
SDHA-205ENST00000504824 VPS72Q15906 364 aa24.82■■□□□ 1.56
SDHA-205ENST00000504824 ITSN1Q15811 1721 aa24.81■■□□□ 1.56
SDHA-205ENST00000504824 TRPM3Q9HCF6 1732 aaPredicted RBP24.81■■□□□ 1.56
SDHA-205ENST00000504824 PAK3O75914 559 aaPredicted RBP24.79■■□□□ 1.56
SDHA-205ENST00000504824 CDK19Q9BWU1 502 aa24.79■■□□□ 1.56
SDHA-205ENST00000504824 NUDT16Q96DE0 195 aaKnown RBP24.78■■□□□ 1.56
SDHA-205ENST00000504824 ALS2Q96Q42 1657 aa24.78■■□□□ 1.56
SDHA-205ENST00000504824 A0A0G2JS52 829 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms