RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 FAM135BQ49AJ0 1406 aa7.13□□□□□ -1.27
LMNB1-208ENST00000504788 RBM42Q9BTD8 480 aaKnown RBP7.13□□□□□ -1.27
LMNB1-208ENST00000504788 PLEKHH1Q9ULM0 1364 aa7.12□□□□□ -1.27
LMNB1-208ENST00000504788 SIRT1Q96EB6 747 aa7.11□□□□□ -1.27
LMNB1-208ENST00000504788 AMOTL2Q9Y2J4 779 aa7.11□□□□□ -1.27
LMNB1-208ENST00000504788 QRICH2Q9H0J4 1663 aa7.11□□□□□ -1.27
LMNB1-208ENST00000504788 USP32Q8NFA0 1604 aa7.11□□□□□ -1.27
LMNB1-208ENST00000504788 NCOA3Q9Y6Q9 1424 aa7.1□□□□□ -1.27
LMNB1-208ENST00000504788 CDC42BPGQ6DT37 1551 aa7.1□□□□□ -1.27
LMNB1-208ENST00000504788 TULP4Q9NRJ4 1543 aa7.1□□□□□ -1.27
LMNB1-208ENST00000504788 ROCK2O75116 1388 aaKnown RBP7.09□□□□□ -1.27
LMNB1-208ENST00000504788 SBNO2Q9Y2G9 1366 aa7.09□□□□□ -1.27
LMNB1-208ENST00000504788 TESK2Q96S53 571 aa7.09□□□□□ -1.27
LMNB1-208ENST00000504788 ZNF219Q9P2Y4 722 aaPredicted RBP7.09□□□□□ -1.27
LMNB1-208ENST00000504788 RGPD8O14715 1765 aaPredicted RBP7.09□□□□□ -1.27
LMNB1-208ENST00000504788 FMN2Q9NZ56 1722 aa7.09□□□□□ -1.27
LMNB1-208ENST00000504788 IQSEC2Q5JU85 1478 aa7.09□□□□□ -1.27
LMNB1-208ENST00000504788 TMEM94Q12767 1356 aa7.09□□□□□ -1.27
LMNB1-208ENST00000504788 ADGRL3Q9HAR2 1447 aa7.08□□□□□ -1.28
LMNB1-208ENST00000504788 TOPAZ1Q8N9V7 1692 aa7.08□□□□□ -1.28
LMNB1-208ENST00000504788 WAPLQ7Z5K2 1190 aa7.08□□□□□ -1.28
LMNB1-208ENST00000504788 RBM33Q96EV2 1170 aaKnown RBP7.07□□□□□ -1.28
LMNB1-208ENST00000504788 TRAK1Q9UPV9 953 aa7.07□□□□□ -1.28
LMNB1-208ENST00000504788 DCCP43146 1447 aa7.07□□□□□ -1.28
LMNB1-208ENST00000504788 USP47Q96K76 1375 aa7.07□□□□□ -1.28
LMNB1-208ENST00000504788 MYOM1P52179 1685 aa7.07□□□□□ -1.28
LMNB1-208ENST00000504788 CHRDL2Q6WN34 429 aa7.06□□□□□ -1.28
LMNB1-208ENST00000504788 SP7Q8TDD2 431 aaPredicted RBP7.06□□□□□ -1.28
LMNB1-208ENST00000504788 PRAM1Q96QH2 718 aa7.06□□□□□ -1.28
LMNB1-208ENST00000504788 CARD11Q9BXL7 1154 aa7.06□□□□□ -1.28
LMNB1-208ENST00000504788 STK26Q9P289 416 aa7.06□□□□□ -1.28
LMNB1-208ENST00000504788 ATP7BP35670 1465 aa7.05□□□□□ -1.28
LMNB1-208ENST00000504788 MST1RQ04912 1400 aa7.05□□□□□ -1.28
LMNB1-208ENST00000504788 BCANQ96GW7 911 aa7.05□□□□□ -1.28
LMNB1-208ENST00000504788 ST20-MTHFSA0A0A6YYL1 179 aa7.04□□□□□ -1.28
LMNB1-208ENST00000504788 PRR36Q9H6K5 1346 aa7.04□□□□□ -1.28
LMNB1-208ENST00000504788 CENPJQ9HC77 1338 aaPredicted RBP7.04□□□□□ -1.28
LMNB1-208ENST00000504788 DISP3Q9P2K9 1392 aa7.04□□□□□ -1.28
LMNB1-208ENST00000504788 C11orf95C9JLR9 678 aaPredicted RBP7.04□□□□□ -1.28
LMNB1-208ENST00000504788 NPM3O75607 178 aaKnown RBP7.04□□□□□ -1.28
LMNB1-208ENST00000504788 PROSER2Q86WR7 435 aaPredicted RBP7.04□□□□□ -1.28
LMNB1-208ENST00000504788 C19orf44Q9H6X5 657 aa7.03□□□□□ -1.28
LMNB1-208ENST00000504788 NHSL1Q5SYE7 1610 aa7.03□□□□□ -1.28
LMNB1-208ENST00000504788 CD163L1Q9NR16 1453 aa7.02□□□□□ -1.29
LMNB1-208ENST00000504788 ITSN1Q15811 1721 aa7.02□□□□□ -1.29
LMNB1-208ENST00000504788 ABCB7O75027 752 aa7.02□□□□□ -1.29
LMNB1-208ENST00000504788 HSPA5P11021 654 aaKnown RBP7.02□□□□□ -1.29
LMNB1-208ENST00000504788 CERKQ8TCT0 537 aa7.02□□□□□ -1.29
LMNB1-208ENST00000504788 AKAP12Q02952 1782 aa7.02□□□□□ -1.29
LMNB1-208ENST00000504788 ROBO1Q9Y6N7 1651 aa7.02□□□□□ -1.29
LMNB1-208ENST00000504788 C1orf167Q5SNV9 1468 aa7.02□□□□□ -1.29
LMNB1-208ENST00000504788 EIF3AQ14152 1382 aaKnown RBP7.02□□□□□ -1.29
LMNB1-208ENST00000504788 WASLO00401 505 aaPredicted RBP7.01□□□□□ -1.29
LMNB1-208ENST00000504788 ZEB1P37275 1124 aaPredicted RBP7.01□□□□□ -1.29
LMNB1-208ENST00000504788 ANKARQ7Z5J8 1434 aa7.01□□□□□ -1.29
LMNB1-208ENST00000504788 NRKQ7Z2Y5 1582 aa7.01□□□□□ -1.29
LMNB1-208ENST00000504788 SAFB2Q14151 953 aaKnown RBP eCLIP7.01□□□□□ -1.29
LMNB1-208ENST00000504788 HIRIP3Q9BW71 556 aaPredicted RBP7.01□□□□□ -1.29
LMNB1-208ENST00000504788 TRPM3Q9HCF6 1732 aaPredicted RBP7.01□□□□□ -1.29
LMNB1-208ENST00000504788 MINK1Q8N4C8 1332 aaPredicted RBP7.01□□□□□ -1.29
LMNB1-208ENST00000504788 MSH6P52701 1360 aa7□□□□□ -1.29
LMNB1-208ENST00000504788 MON2Q7Z3U7 1717 aa7□□□□□ -1.29
LMNB1-208ENST00000504788 MARF1Q9Y4F3 1742 aaKnown RBP7□□□□□ -1.29
LMNB1-208ENST00000504788 EIF4G2P78344 907 aaKnown RBP eCLIP7□□□□□ -1.295e-6■■□□□ 14.3
LMNB1-208ENST00000504788 KIF1AQ12756 1690 aa7□□□□□ -1.29
LMNB1-208ENST00000504788 SSH2Q76I76 1423 aa6.99□□□□□ -1.29
LMNB1-208ENST00000504788 AHDC1Q5TGY3 1603 aaPredicted RBP6.99□□□□□ -1.29
LMNB1-208ENST00000504788 PUS7Q96PZ0 661 aaKnown RBP6.99□□□□□ -1.29
LMNB1-208ENST00000504788 CRYBG1Q9Y4K1 1723 aa6.99□□□□□ -1.29
LMNB1-208ENST00000504788 POLR3AO14802 1390 aaPredicted RBP6.99□□□□□ -1.29
LMNB1-208ENST00000504788 COL16A1Q07092 1604 aaPredicted RBP6.99□□□□□ -1.29
LMNB1-208ENST00000504788 CPSF1Q10570 1443 aaKnown RBP6.99□□□□□ -1.29
LMNB1-208ENST00000504788 PXDNQ92626 1479 aa6.99□□□□□ -1.29
LMNB1-208ENST00000504788 KCNA4P22459 653 aa6.99□□□□□ -1.29
LMNB1-208ENST00000504788 CDK19Q9BWU1 502 aa6.99□□□□□ -1.29
LMNB1-208ENST00000504788 POGKQ9P215 609 aa6.99□□□□□ -1.29
LMNB1-208ENST00000504788 WASHC2AQ641Q2 1341 aa6.98□□□□□ -1.29
LMNB1-208ENST00000504788 ALS2Q96Q42 1657 aa6.98□□□□□ -1.29
LMNB1-208ENST00000504788 CADPS2Q86UW7 1296 aa6.98□□□□□ -1.29
LMNB1-208ENST00000504788 ORAI2Q96SN7 254 aa6.98□□□□□ -1.29
LMNB1-208ENST00000504788 USP54Q70EL1 1684 aa6.98□□□□□ -1.29
LMNB1-208ENST00000504788 BRINP3Q76B58 766 aa6.97□□□□□ -1.29
LMNB1-208ENST00000504788 CABP2Q9NPB3 220 aa6.97□□□□□ -1.29
LMNB1-208ENST00000504788 SLAIN2Q9P270 581 aa6.97□□□□□ -1.29
LMNB1-208ENST00000504788 KIF7Q2M1P5 1343 aa6.97□□□□□ -1.29
LMNB1-208ENST00000504788 PLEKHG3A1L390 1219 aa6.97□□□□□ -1.29
LMNB1-208ENST00000504788 NUDT16Q96DE0 195 aaKnown RBP6.97□□□□□ -1.29
LMNB1-208ENST00000504788 EVC2Q86UK5 1308 aa6.96□□□□□ -1.29
LMNB1-208ENST00000504788 CCDC61Q9Y6R9 512 aa6.96□□□□□ -1.3
LMNB1-208ENST00000504788 CCDC7Q96M83 1385 aa6.96□□□□□ -1.3
LMNB1-208ENST00000504788 PPIP5K1Q6PFW1 1433 aa6.96□□□□□ -1.3
LMNB1-208ENST00000504788 PIK3C2AO00443 1686 aa6.96□□□□□ -1.3
LMNB1-208ENST00000504788 NUTM2FA1L443 756 aa6.95□□□□□ -1.3
LMNB1-208ENST00000504788 SOS2Q07890 1332 aaPredicted RBP6.95□□□□□ -1.3
LMNB1-208ENST00000504788 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
LMNB1-208ENST00000504788 ABCA3Q99758 1704 aa6.95□□□□□ -1.3
LMNB1-208ENST00000504788 PHLPP1O60346 1717 aa6.95□□□□□ -1.3
LMNB1-208ENST00000504788 COL22A1Q8NFW1 1626 aaPredicted RBP6.95□□□□□ -1.3
LMNB1-208ENST00000504788 A0A1W2PP64 1363 aa6.94□□□□□ -1.3
LMNB1-208ENST00000504788 ATF3P18847 181 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms