RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 DDX49Q9Y6V7 483 aaKnown RBP17.75■□□□□ 0.43
COL6A4P2-202ENST00000504443 SSFA2P28290 1259 aa17.74■□□□□ 0.43
COL6A4P2-202ENST00000504443 BBXQ8WY36 941 aaPredicted RBP17.74■□□□□ 0.43
COL6A4P2-202ENST00000504443 TSC1Q92574 1164 aa17.74■□□□□ 0.43
COL6A4P2-202ENST00000504443 RAB3GAP1Q15042 981 aa17.74■□□□□ 0.43
COL6A4P2-202ENST00000504443 SKOR2Q2VWA4 1001 aaPredicted RBP17.74■□□□□ 0.43
COL6A4P2-202ENST00000504443 RWDD1Q9H446 243 aaPredicted RBP17.74■□□□□ 0.43
COL6A4P2-202ENST00000504443 RRP7AQ9Y3A4 280 aaKnown RBP17.74■□□□□ 0.43
COL6A4P2-202ENST00000504443 CD2BP2O95400 341 aaKnown RBP17.73■□□□□ 0.43
COL6A4P2-202ENST00000504443 TERF1P54274 439 aa17.73■□□□□ 0.43
COL6A4P2-202ENST00000504443 RARSP54136 660 aaKnown RBP17.73■□□□□ 0.43
COL6A4P2-202ENST00000504443 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
COL6A4P2-202ENST00000504443 ZSCAN20P17040 1043 aaPredicted RBP17.71■□□□□ 0.43
COL6A4P2-202ENST00000504443 PIK3C2GO75747 1445 aa17.71■□□□□ 0.42
COL6A4P2-202ENST00000504443 PLA2R1Q13018 1463 aa17.71■□□□□ 0.42
COL6A4P2-202ENST00000504443 ITSN2Q9NZM3 1697 aa17.7■□□□□ 0.42
COL6A4P2-202ENST00000504443 HNRNPMP52272 730 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL6A4P2-202ENST00000504443 DMTNQ08495 405 aa17.7■□□□□ 0.42
COL6A4P2-202ENST00000504443 NOL7Q9UMY1 257 aaKnown RBP17.7■□□□□ 0.42
COL6A4P2-202ENST00000504443 RBSNQ9H1K0 784 aa17.7■□□□□ 0.42
COL6A4P2-202ENST00000504443 NCOA3Q9Y6Q9 1424 aa17.7■□□□□ 0.42
COL6A4P2-202ENST00000504443 SLC24A1O60721 1099 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 CBX1P83916 185 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 SMC5Q8IY18 1101 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 RBM42Q9BTD8 480 aaKnown RBP17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 NINLQ9Y2I6 1382 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 ABCC10Q5T3U5 1492 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 FAM135AQ9P2D6 1515 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 ABCA8O94911 1581 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 ABCC2Q92887 1545 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 TSPY4P0CV99 314 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 TSPY10P0CW01 314 aa17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 CAVIN1Q6NZI2 390 aaKnown RBP17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.42
COL6A4P2-202ENST00000504443 BCL11BQ9C0K0 894 aaPredicted RBP17.68■□□□□ 0.42
COL6A4P2-202ENST00000504443 DYNC1I1O14576 645 aa17.68■□□□□ 0.42
COL6A4P2-202ENST00000504443 ZMYM3Q14202 1370 aa17.68■□□□□ 0.42
COL6A4P2-202ENST00000504443 FAM177BA6PVY3 158 aa17.68■□□□□ 0.42
COL6A4P2-202ENST00000504443 ZNF500O60304 480 aaPredicted RBP17.68■□□□□ 0.42
COL6A4P2-202ENST00000504443 SHROOM2Q13796 1616 aa17.67■□□□□ 0.42
COL6A4P2-202ENST00000504443 CDC42BPAQ5VT25 1732 aa17.67■□□□□ 0.42
COL6A4P2-202ENST00000504443 ASXL1Q8IXJ9 1541 aa17.66■□□□□ 0.42
COL6A4P2-202ENST00000504443 GTF2E1P29083 439 aaPredicted RBP17.66■□□□□ 0.42
COL6A4P2-202ENST00000504443 CYB5RLQ6IPT4 315 aa17.66■□□□□ 0.42
COL6A4P2-202ENST00000504443 MPNDQ8N594 471 aa17.66■□□□□ 0.42
COL6A4P2-202ENST00000504443 CCDC94Q9BW85 323 aaPredicted RBP17.66■□□□□ 0.42
COL6A4P2-202ENST00000504443 MCTP1Q6DN14 999 aa17.65■□□□□ 0.42
COL6A4P2-202ENST00000504443 PRIM1P49642 420 aaKnown RBP17.64■□□□□ 0.41
COL6A4P2-202ENST00000504443 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
COL6A4P2-202ENST00000504443 LAMC1P11047 1609 aa17.64■□□□□ 0.41
COL6A4P2-202ENST00000504443 IGSF3O75054 1194 aa17.64■□□□□ 0.41
COL6A4P2-202ENST00000504443 BAG4O95429 457 aaKnown RBP17.64■□□□□ 0.41
COL6A4P2-202ENST00000504443 RBM27Q9P2N5 1060 aaKnown RBP17.64■□□□□ 0.41
COL6A4P2-202ENST00000504443 KLHL40Q2TBA0 621 aa17.63■□□□□ 0.41
COL6A4P2-202ENST00000504443 ZSCAN23Q3MJ62 389 aa17.63■□□□□ 0.41
COL6A4P2-202ENST00000504443 CIZ1Q9ULV3 898 aaPredicted RBP17.63■□□□□ 0.41
COL6A4P2-202ENST00000504443 ZKSCAN5Q9Y2L8 839 aa17.63■□□□□ 0.41
COL6A4P2-202ENST00000504443 PLXNC1O60486 1568 aa17.63■□□□□ 0.41
COL6A4P2-202ENST00000504443 GOLGA6L22H0YM25 854 aa17.63■□□□□ 0.41
COL6A4P2-202ENST00000504443 PPP4R3BQ5MIZ7 849 aa17.63■□□□□ 0.41
COL6A4P2-202ENST00000504443 SASS6Q6UVJ0 657 aa17.63■□□□□ 0.41
COL6A4P2-202ENST00000504443 SNX21Q969T3 373 aa17.63■□□□□ 0.41
COL6A4P2-202ENST00000504443 MTERF4Q7Z6M4 381 aaKnown RBP17.62■□□□□ 0.41
COL6A4P2-202ENST00000504443 STAC3Q96MF2 364 aa17.62■□□□□ 0.41
COL6A4P2-202ENST00000504443 UTP14CQ5TAP6 766 aaKnown RBP17.62■□□□□ 0.41
COL6A4P2-202ENST00000504443 KIF2CQ99661 725 aa17.61■□□□□ 0.41
COL6A4P2-202ENST00000504443 MYO5CQ9NQX4 1742 aa17.61■□□□□ 0.41
COL6A4P2-202ENST00000504443 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
COL6A4P2-202ENST00000504443 CHAMP1Q96JM3 812 aa17.61■□□□□ 0.41
COL6A4P2-202ENST00000504443 SHANK2Q9UPX8 1470 aa17.61■□□□□ 0.41
COL6A4P2-202ENST00000504443 RBM25P49756 843 aaKnown RBP17.6■□□□□ 0.41
COL6A4P2-202ENST00000504443 CHMP4BQ9H444 224 aaKnown RBP17.6■□□□□ 0.41
COL6A4P2-202ENST00000504443 DNTTIP2Q5QJE6 756 aaKnown RBP17.6■□□□□ 0.41
COL6A4P2-202ENST00000504443 RNF214Q8ND24 703 aa17.6■□□□□ 0.41
COL6A4P2-202ENST00000504443 HS1BP3Q53T59 392 aa17.59■□□□□ 0.41
COL6A4P2-202ENST00000504443 FTSJ3Q8IY81 847 aaKnown RBP17.59■□□□□ 0.41
COL6A4P2-202ENST00000504443 PDLIM2Q96JY6 352 aa17.59■□□□□ 0.41
COL6A4P2-202ENST00000504443 LNPKQ9C0E8 428 aa17.59■□□□□ 0.41
COL6A4P2-202ENST00000504443 CCDC141Q6ZP82 1450 aa17.59■□□□□ 0.41
COL6A4P2-202ENST00000504443 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.41
COL6A4P2-202ENST00000504443 ATP2B3Q16720 1220 aa17.58■□□□□ 0.41
COL6A4P2-202ENST00000504443 CSPP1Q1MSJ5 1256 aa17.58■□□□□ 0.41
COL6A4P2-202ENST00000504443 TNNT2P45379 298 aaPredicted RBP17.58■□□□□ 0.4
COL6A4P2-202ENST00000504443 PKP1Q13835 747 aa17.58■□□□□ 0.4
COL6A4P2-202ENST00000504443 ZNF710Q8N1W2 664 aa17.58■□□□□ 0.4
COL6A4P2-202ENST00000504443 K7ELQ4 463 aaPredicted RBP17.57■□□□□ 0.4
COL6A4P2-202ENST00000504443 PTMSP20962 102 aa17.57■□□□□ 0.4
COL6A4P2-202ENST00000504443 ZNF445P59923 1031 aa17.57■□□□□ 0.4
COL6A4P2-202ENST00000504443 VGLL3A8MV65 326 aa17.57■□□□□ 0.4
COL6A4P2-202ENST00000504443 TCP11L2Q8N4U5 519 aa17.57■□□□□ 0.4
COL6A4P2-202ENST00000504443 CARD14Q9BXL6 1004 aa17.57■□□□□ 0.4
COL6A4P2-202ENST00000504443 SYNMO15061 1565 aa17.57■□□□□ 0.4
COL6A4P2-202ENST00000504443 NAP1L2Q9ULW6 460 aaPredicted RBP17.56■□□□□ 0.4
COL6A4P2-202ENST00000504443 EIF2AK4Q9P2K8 1649 aaKnown RBP17.55■□□□□ 0.4
COL6A4P2-202ENST00000504443 PRPF40AO75400 957 aaKnown RBP17.55■□□□□ 0.4
COL6A4P2-202ENST00000504443 ZBTB22O15209 634 aa17.55■□□□□ 0.4
COL6A4P2-202ENST00000504443 ITPRIPQ8IWB1 547 aa17.55■□□□□ 0.4
COL6A4P2-202ENST00000504443 ZNF830Q96NB3 372 aaPredicted RBP17.55■□□□□ 0.4
COL6A4P2-202ENST00000504443 DZIP1LQ8IYY4 767 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms