RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 PTGDRQ13258 359 aa8.99□□□□□ -0.97
NPHP3-AS1-202ENST00000504440 DDRGK1Q96HY6 314 aa8.99□□□□□ -0.97
NPHP3-AS1-202ENST00000504440 ZMYND15Q9H091 742 aa8.99□□□□□ -0.97
NPHP3-AS1-202ENST00000504440 UHRF1BP1LA0JNW5 1464 aa8.99□□□□□ -0.97
NPHP3-AS1-202ENST00000504440 CDK11AQ9UQ88 783 aaPredicted RBP8.98□□□□□ -0.97
NPHP3-AS1-202ENST00000504440 AKNAQ7Z591 1439 aa8.97□□□□□ -0.97
NPHP3-AS1-202ENST00000504440 RPRD2Q5VT52 1461 aaKnown RBP8.97□□□□□ -0.97
NPHP3-AS1-202ENST00000504440 TEX14Q8IWB6 1497 aa8.96□□□□□ -0.97
NPHP3-AS1-202ENST00000504440 SPATA31E1Q6ZUB1 1445 aa8.96□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 PPP4R2Q9NY27 417 aa8.95□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 TROQ12816 1431 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 CFDP1Q9UEE9 299 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 ROCK1Q13464 1354 aa8.94□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 CDHR5Q9HBB8 845 aa8.94□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 ZCCHC11Q5TAX3 1644 aaKnown RBP8.94□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 REPIN1Q9BWE0 567 aaKnown RBP8.94□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 ZBED9Q6R2W3 1325 aa8.94□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 PLEKHD1A6NEE1 506 aa8.93□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 GIGYF2Q6Y7W6 1299 aaKnown RBP8.93□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 PTCD2Q8WV60 388 aaKnown RBP8.93□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 RSPH6AQ9H0K4 717 aa8.93□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 PZPP20742 1482 aa8.93□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 MS4A1P11836 297 aa8.93□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 POTEFA5A3E0 1075 aa8.92□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 GABBR2O75899 941 aa8.92□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 KIF14Q15058 1648 aa8.92□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 DHX29Q7Z478 1369 aaKnown RBP8.92□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 DNMT1P26358 1616 aaKnown RBP8.91□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 NPDC1Q9NQX5 325 aaPredicted RBP8.91□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 DCBLD2Q96PD2 775 aa8.91□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 FANCIQ9NVI1 1328 aa8.9□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 USP47Q96K76 1375 aa8.9□□□□□ -0.98
NPHP3-AS1-202ENST00000504440 MAP3K7O43318 606 aa8.9□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 C3orf67Q6ZVT6 689 aa8.9□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 CAMSAP2Q08AD1 1489 aa8.9□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 ABCC10Q5T3U5 1492 aa8.9□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 ANO8Q9HCE9 1232 aaPredicted RBP8.89□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 ASXL2Q76L83 1435 aa8.89□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 GPATCH8Q9UKJ3 1502 aaKnown RBP8.89□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 BCORL1Q5H9F3 1711 aa8.89□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 EN1Q05925 392 aaPredicted RBP8.89□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 TSR1Q2NL82 804 aaKnown RBP8.89□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 ERICH6BQ5W0A0 696 aa8.88□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 PHOX2BQ99453 314 aa8.88□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 ARID3AQ99856 593 aa8.88□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 BCL11AQ9H165 835 aa8.88□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 DIP2BQ9P265 1576 aa8.87□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 KIAA1107Q9UPP5 1409 aa8.87□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 KIF13AQ9H1H9 1805 aa8.87□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 CDC42BPAQ5VT25 1732 aa8.87□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 ITSN2Q9NZM3 1697 aa8.87□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 ST20-MTHFSA0A0A6YYL1 179 aa8.87□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 CARD11Q9BXL7 1154 aa8.87□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 C1orf115Q9H7X2 142 aa8.87□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 NUP155O75694 1391 aa8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 HNRNPMP52272 730 aaKnown RBP eCLIP8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 MDM2Q00987 491 aaPredicted RBP8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 FAM161AQ3B820 660 aa8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 PNISRQ8TF01 805 aaKnown RBP8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 SALL2Q9Y467 1007 aaPredicted RBP8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 PCDHGA10Q9Y5H3 936 aa8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 MBD5Q9P267 1494 aa8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 PHF14O94880 888 aa8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 SLC34A2O95436 690 aa8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 SLC39A7Q92504 469 aa8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 GOPCQ9HD26 462 aa8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 WDR7Q9Y4E6 1490 aa8.86□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 TTC37Q6PGP7 1564 aa8.85□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 TMC1Q8TDI8 760 aa8.85□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 DCAF11Q8TEB1 546 aa8.85□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 NUDCQ9Y266 331 aa8.85□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 METRNQ9UJH8 293 aa8.85□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 ANKRD50Q9ULJ7 1429 aa8.85□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 ANKRD30AQ9BXX3 1397 aa8.84□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 FAM69CQ0P6D2 419 aa8.84□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 SMG6Q86US8 1419 aaKnown RBP8.84□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 NLRP7Q8WX94 980 aa8.84□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 CDC42BPBQ9Y5S2 1711 aa8.84□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 C7P10643 843 aa8.84□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 EPAS1Q99814 870 aa8.84□□□□□ -0.99
NPHP3-AS1-202ENST00000504440 PREX2Q70Z35 1606 aa8.84□□□□□ -1
NPHP3-AS1-202ENST00000504440 ONECUT3O60422 494 aaPredicted RBP8.83□□□□□ -1
NPHP3-AS1-202ENST00000504440 FLIIQ13045 1269 aa8.83□□□□□ -1
NPHP3-AS1-202ENST00000504440 SLAIN1Q8ND83 568 aa8.83□□□□□ -1
NPHP3-AS1-202ENST00000504440 MYO5CQ9NQX4 1742 aa8.83□□□□□ -1
NPHP3-AS1-202ENST00000504440 CLCN1P35523 988 aa8.83□□□□□ -1
NPHP3-AS1-202ENST00000504440 CCDC136Q96JN2 1154 aa8.83□□□□□ -1
NPHP3-AS1-202ENST00000504440 PCMTD1Q96MG8 357 aaPredicted RBP8.83□□□□□ -1
NPHP3-AS1-202ENST00000504440 TMUB1Q9BVT8 246 aa8.83□□□□□ -1
NPHP3-AS1-202ENST00000504440 GPCPD1Q9NPB8 672 aa8.83□□□□□ -1
NPHP3-AS1-202ENST00000504440 RGL3Q3MIN7 710 aa8.82□□□□□ -1
NPHP3-AS1-202ENST00000504440 GLI2P10070 1586 aa8.82□□□□□ -1
NPHP3-AS1-202ENST00000504440 KDM5CP41229 1560 aa8.82□□□□□ -1
NPHP3-AS1-202ENST00000504440 ABCA9Q8IUA7 1624 aa8.82□□□□□ -1
NPHP3-AS1-202ENST00000504440 ADGRL2O95490 1459 aa8.81□□□□□ -1
NPHP3-AS1-202ENST00000504440 POLR1AO95602 1720 aaPredicted RBP8.81□□□□□ -1
NPHP3-AS1-202ENST00000504440 TSPY4P0CV99 314 aa8.81□□□□□ -1
NPHP3-AS1-202ENST00000504440 TSPY10P0CW01 314 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms