RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
PDLIM7-212ENST00000504380 ARHGEF28Q8N1W1 1705 aaKnown RBP18.82■□□□□ 0.6
PDLIM7-212ENST00000504380 DLC1Q96QB1 1528 aa18.81■□□□□ 0.6
PDLIM7-212ENST00000504380 PIP4K2BP78356 416 aa18.81■□□□□ 0.6
PDLIM7-212ENST00000504380 SIRT1Q96EB6 747 aa18.8■□□□□ 0.6
PDLIM7-212ENST00000504380 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.8■□□□□ 0.6
PDLIM7-212ENST00000504380 MINK1Q8N4C8 1332 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-212ENST00000504380 FAM135BQ49AJ0 1406 aa18.79■□□□□ 0.6
PDLIM7-212ENST00000504380 HIRIP3Q9BW71 556 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-212ENST00000504380 NALCNQ8IZF0 1738 aa18.77■□□□□ 0.6
PDLIM7-212ENST00000504380 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-212ENST00000504380 CENPJQ9HC77 1338 aaPredicted RBP18.76■□□□□ 0.59
PDLIM7-212ENST00000504380 USP47Q96K76 1375 aa18.75■□□□□ 0.59
PDLIM7-212ENST00000504380 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
PDLIM7-212ENST00000504380 MSH6P52701 1360 aa18.74■□□□□ 0.59
PDLIM7-212ENST00000504380 ST20-MTHFSA0A0A6YYL1 179 aa18.74■□□□□ 0.59
PDLIM7-212ENST00000504380 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-212ENST00000504380 C19orf44Q9H6X5 657 aa18.74■□□□□ 0.59
PDLIM7-212ENST00000504380 NCOA3Q9Y6Q9 1424 aa18.74■□□□□ 0.59
PDLIM7-212ENST00000504380 QRICH2Q9H0J4 1663 aa18.73■□□□□ 0.59
PDLIM7-212ENST00000504380 NUTM2FA1L443 756 aa18.73■□□□□ 0.59
PDLIM7-212ENST00000504380 EIF3AQ14152 1382 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-212ENST00000504380 HSPA5P11021 654 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-212ENST00000504380 ATF3P18847 181 aa18.7■□□□□ 0.58
PDLIM7-212ENST00000504380 EIF4G2P78344 907 aaKnown RBP eCLIP18.69■□□□□ 0.58
PDLIM7-212ENST00000504380 WASLO00401 505 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-212ENST00000504380 CADPS2Q86UW7 1296 aa18.67■□□□□ 0.58
PDLIM7-212ENST00000504380 TESK2Q96S53 571 aa18.67■□□□□ 0.58
PDLIM7-212ENST00000504380 CDK19Q9BWU1 502 aa18.67■□□□□ 0.58
PDLIM7-212ENST00000504380 RGS17Q9UGC6 210 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-212ENST00000504380 ADGRB2O60241 1585 aa18.65■□□□□ 0.58
PDLIM7-212ENST00000504380 CDC42BPGQ6DT37 1551 aa18.65■□□□□ 0.58
PDLIM7-212ENST00000504380 SLAIN2Q9P270 581 aa18.65■□□□□ 0.58
PDLIM7-212ENST00000504380 TULP4Q9NRJ4 1543 aa18.64■□□□□ 0.58
PDLIM7-212ENST00000504380 FMN2Q9NZ56 1722 aa18.64■□□□□ 0.57
PDLIM7-212ENST00000504380 CABP2Q9NPB3 220 aa18.64■□□□□ 0.57
PDLIM7-212ENST00000504380 DCCP43146 1447 aa18.64■□□□□ 0.57
PDLIM7-212ENST00000504380 MST1RQ04912 1400 aa18.64■□□□□ 0.57
PDLIM7-212ENST00000504380 PRR36Q9H6K5 1346 aa18.63■□□□□ 0.57
PDLIM7-212ENST00000504380 SRPK2P78362 688 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-212ENST00000504380 ORAI2Q96SN7 254 aa18.62■□□□□ 0.57
PDLIM7-212ENST00000504380 EVC2Q86UK5 1308 aa18.62■□□□□ 0.57
PDLIM7-212ENST00000504380 RGPD8O14715 1765 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-212ENST00000504380 C1orf167Q5SNV9 1468 aa18.61■□□□□ 0.57
PDLIM7-212ENST00000504380 NUDT16Q96DE0 195 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-212ENST00000504380 USP32Q8NFA0 1604 aa18.6■□□□□ 0.57
PDLIM7-212ENST00000504380 SBNO2Q9Y2G9 1366 aa18.59■□□□□ 0.57
PDLIM7-212ENST00000504380 ESCO1Q5FWF5 840 aa18.59■□□□□ 0.57
PDLIM7-212ENST00000504380 C11orf95C9JLR9 678 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-212ENST00000504380 TMF1P82094 1093 aa18.57■□□□□ 0.56
PDLIM7-212ENST00000504380 BRINP3Q76B58 766 aa18.57■□□□□ 0.56
PDLIM7-212ENST00000504380 DDX17Q92841 729 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-212ENST00000504380 PMFBP1Q8TBY8 1022 aa18.56■□□□□ 0.56
PDLIM7-212ENST00000504380 POLR3GLQ9BT43 218 aa18.56■□□□□ 0.56
PDLIM7-212ENST00000504380 ROBO1Q9Y6N7 1651 aa18.55■□□□□ 0.56
PDLIM7-212ENST00000504380 ATP7BP35670 1465 aa18.55■□□□□ 0.56
PDLIM7-212ENST00000504380 ANKARQ7Z5J8 1434 aa18.55■□□□□ 0.56
PDLIM7-212ENST00000504380 PHF8Q9UPP1 1060 aa18.53■□□□□ 0.56
PDLIM7-212ENST00000504380 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
PDLIM7-212ENST00000504380 CCDC61Q9Y6R9 512 aa18.52■□□□□ 0.56
PDLIM7-212ENST00000504380 FOXO3O43524 673 aa18.51■□□□□ 0.55
PDLIM7-212ENST00000504380 XPCQ01831 940 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-212ENST00000504380 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
PDLIM7-212ENST00000504380 PPIP5K1Q6PFW1 1433 aa18.5■□□□□ 0.55
PDLIM7-212ENST00000504380 POTEAQ6S8J7 498 aa18.5■□□□□ 0.55
PDLIM7-212ENST00000504380 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
PDLIM7-212ENST00000504380 TOPAZ1Q8N9V7 1692 aa18.5■□□□□ 0.55
PDLIM7-212ENST00000504380 SLC24A1O60721 1099 aa18.49■□□□□ 0.55
PDLIM7-212ENST00000504380 ATAD2Q6PL18 1390 aa18.48■□□□□ 0.55
PDLIM7-212ENST00000504380 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-212ENST00000504380 ITSN1Q15811 1721 aa18.48■□□□□ 0.55
PDLIM7-212ENST00000504380 ACEP12821 1306 aa18.48■□□□□ 0.55
PDLIM7-212ENST00000504380 PLEKHG3A1L390 1219 aa18.47■□□□□ 0.55
PDLIM7-212ENST00000504380 KIF7Q2M1P5 1343 aa18.47■□□□□ 0.55
PDLIM7-212ENST00000504380 CDCA8Q53HL2 280 aa18.46■□□□□ 0.55
PDLIM7-212ENST00000504380 PUS7Q96PZ0 661 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-212ENST00000504380 KIF1AQ12756 1690 aa18.45■□□□□ 0.54
PDLIM7-212ENST00000504380 PSME1Q06323 249 aa18.44■□□□□ 0.54
PDLIM7-212ENST00000504380 KRT28Q7Z3Y7 464 aa18.44■□□□□ 0.54
PDLIM7-212ENST00000504380 NHSL1Q5SYE7 1610 aa18.44■□□□□ 0.54
PDLIM7-212ENST00000504380 WASHC2AQ641Q2 1341 aa18.44■□□□□ 0.54
PDLIM7-212ENST00000504380 PHLPP1O60346 1717 aa18.43■□□□□ 0.54
PDLIM7-212ENST00000504380 NPHP3Q7Z494 1330 aa18.43■□□□□ 0.54
PDLIM7-212ENST00000504380 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
PDLIM7-212ENST00000504380 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-212ENST00000504380 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-212ENST00000504380 MYOM1P52179 1685 aa18.41■□□□□ 0.54
PDLIM7-212ENST00000504380 CD163L1Q9NR16 1453 aa18.41■□□□□ 0.54
PDLIM7-212ENST00000504380 PXDNQ92626 1479 aa18.4■□□□□ 0.54
PDLIM7-212ENST00000504380 SOS2Q07890 1332 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-212ENST00000504380 PAK3O75914 559 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-212ENST00000504380 COL16A1Q07092 1604 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-212ENST00000504380 AKAP12Q02952 1782 aa18.38■□□□□ 0.53
PDLIM7-212ENST00000504380 PLEKHG5O94827 1062 aa18.38■□□□□ 0.53
PDLIM7-212ENST00000504380 HDGFL2Q7Z4V5 671 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-212ENST00000504380 A0A1W2PP64 1363 aa18.38■□□□□ 0.53
PDLIM7-212ENST00000504380 CPSF1Q10570 1443 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-212ENST00000504380 LMOD2Q6P5Q4 547 aa18.37■□□□□ 0.53
PDLIM7-212ENST00000504380 TERF2IPQ9NYB0 399 aa18.37■□□□□ 0.53
PDLIM7-212ENST00000504380 KTN1Q86UP2 1357 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms