RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 TULP4Q9NRJ4 1543 aa13.07□□□□□ -0.32
COL1A1-210ENST00000504289 CGNL1Q0VF96 1302 aa13.07□□□□□ -0.32
COL1A1-210ENST00000504289 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
COL1A1-210ENST00000504289 TNRQ92752 1358 aa13.07□□□□□ -0.32
COL1A1-210ENST00000504289 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
COL1A1-210ENST00000504289 NLRP1Q9C000 1473 aa13.05□□□□□ -0.32
COL1A1-210ENST00000504289 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
COL1A1-210ENST00000504289 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
COL1A1-210ENST00000504289 NSD3Q9BZ95 1437 aa13.04□□□□□ -0.32
COL1A1-210ENST00000504289 MED14O60244 1454 aa13.03□□□□□ -0.32
COL1A1-210ENST00000504289 SLC12A5Q9H2X9 1139 aa13.02□□□□□ -0.33
COL1A1-210ENST00000504289 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
COL1A1-210ENST00000504289 POGKQ9P215 609 aa13.02□□□□□ -0.33
COL1A1-210ENST00000504289 ADAMTS8Q9UP79 889 aa13.02□□□□□ -0.33
COL1A1-210ENST00000504289 TECPR2O15040 1411 aa13.02□□□□□ -0.33
COL1A1-210ENST00000504289 FAM135BQ49AJ0 1406 aa13.02□□□□□ -0.33
COL1A1-210ENST00000504289 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
COL1A1-210ENST00000504289 MLECQ14165 292 aa13.01□□□□□ -0.33
COL1A1-210ENST00000504289 NUTM2DQ5VT03 806 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-210ENST00000504289 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
COL1A1-210ENST00000504289 TMEM2Q9UHN6 1383 aa13□□□□□ -0.33
COL1A1-210ENST00000504289 PRAM1Q96QH2 718 aa13□□□□□ -0.33
COL1A1-210ENST00000504289 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
COL1A1-210ENST00000504289 CFAP53Q96M91 514 aa12.98□□□□□ -0.33
COL1A1-210ENST00000504289 STK26Q9P289 416 aa12.98□□□□□ -0.33
COL1A1-210ENST00000504289 UBR1Q8IWV7 1749 aa12.98□□□□□ -0.33
COL1A1-210ENST00000504289 NRXN3Q9Y4C0 1643 aa12.98□□□□□ -0.33
COL1A1-210ENST00000504289 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
COL1A1-210ENST00000504289 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
COL1A1-210ENST00000504289 HDGFL2Q7Z4V5 671 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-210ENST00000504289 ATP7BP35670 1465 aa12.97□□□□□ -0.33
COL1A1-210ENST00000504289 PLEKHG1Q9ULL1 1385 aa12.96□□□□□ -0.33
COL1A1-210ENST00000504289 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
COL1A1-210ENST00000504289 RCAN3Q9UKA8 241 aa12.96□□□□□ -0.33
COL1A1-210ENST00000504289 CPS1P31327 1500 aa12.95□□□□□ -0.34
COL1A1-210ENST00000504289 BCANQ96GW7 911 aa12.95□□□□□ -0.34
COL1A1-210ENST00000504289 CDK19Q9BWU1 502 aa12.95□□□□□ -0.34
COL1A1-210ENST00000504289 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
COL1A1-210ENST00000504289 SLIT1O75093 1534 aa12.94□□□□□ -0.34
COL1A1-210ENST00000504289 GOLGA2Q08379 1002 aa12.94□□□□□ -0.34
COL1A1-210ENST00000504289 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
COL1A1-210ENST00000504289 MINK1Q8N4C8 1332 aaPredicted RBP12.93□□□□□ -0.34
COL1A1-210ENST00000504289 ARHGAP23Q9P227 1491 aa12.93□□□□□ -0.34
COL1A1-210ENST00000504289 CD163L1Q9NR16 1453 aa12.92□□□□□ -0.34
COL1A1-210ENST00000504289 RRP1P56182 461 aaKnown RBP12.92□□□□□ -0.34
COL1A1-210ENST00000504289 TRMT2AQ8IZ69 625 aaKnown RBP12.92□□□□□ -0.34
COL1A1-210ENST00000504289 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
COL1A1-210ENST00000504289 WASLO00401 505 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-210ENST00000504289 METP08581 1390 aa12.91□□□□□ -0.34
COL1A1-210ENST00000504289 DIP2AQ14689 1571 aa12.9□□□□□ -0.34
COL1A1-210ENST00000504289 C3P01024 1663 aa12.9□□□□□ -0.34
COL1A1-210ENST00000504289 ADAMTS13Q76LX8 1427 aa12.9□□□□□ -0.34
COL1A1-210ENST00000504289 E9PSI1 815 aa12.9□□□□□ -0.34
COL1A1-210ENST00000504289 SAFB2Q14151 953 aaKnown RBP eCLIP12.9□□□□□ -0.34
COL1A1-210ENST00000504289 CCDC27Q2M243 656 aa12.9□□□□□ -0.34
COL1A1-210ENST00000504289 THEMISQ8N1K5 641 aaPredicted RBP12.9□□□□□ -0.34
COL1A1-210ENST00000504289 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
COL1A1-210ENST00000504289 TBX22Q9Y458 520 aa12.9□□□□□ -0.34
COL1A1-210ENST00000504289 PLEKHH1Q9ULM0 1364 aa12.9□□□□□ -0.34
COL1A1-210ENST00000504289 ADGRB2O60241 1585 aa12.9□□□□□ -0.35
COL1A1-210ENST00000504289 SHPRHQ149N8 1683 aa12.89□□□□□ -0.35
COL1A1-210ENST00000504289 FER1L4A9Z1Z3 1794 aa12.89□□□□□ -0.35
COL1A1-210ENST00000504289 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
COL1A1-210ENST00000504289 FYB1O15117 783 aa12.89□□□□□ -0.35
COL1A1-210ENST00000504289 MTHFSP49914 203 aa12.89□□□□□ -0.35
COL1A1-210ENST00000504289 SLFN5Q08AF3 891 aa12.89□□□□□ -0.35
COL1A1-210ENST00000504289 DUSP27Q5VZP5 1158 aa12.89□□□□□ -0.35
COL1A1-210ENST00000504289 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
COL1A1-210ENST00000504289 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
COL1A1-210ENST00000504289 EDC4Q6P2E9 1401 aaKnown RBP12.88□□□□□ -0.35
COL1A1-210ENST00000504289 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-210ENST00000504289 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-210ENST00000504289 TSHZ2Q9NRE2 1034 aa12.88□□□□□ -0.35
COL1A1-210ENST00000504289 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
COL1A1-210ENST00000504289 PNPLA6Q8IY17 1366 aa12.87□□□□□ -0.35
COL1A1-210ENST00000504289 PIK3R4Q99570 1358 aa12.87□□□□□ -0.35
COL1A1-210ENST00000504289 WDR63Q8IWG1 891 aa12.87□□□□□ -0.35
COL1A1-210ENST00000504289 CDCA7LQ96GN5 454 aa12.87□□□□□ -0.35
COL1A1-210ENST00000504289 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-210ENST00000504289 CABP1Q9NZU7 370 aa12.87□□□□□ -0.35
COL1A1-210ENST00000504289 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
COL1A1-210ENST00000504289 KIF20BQ96Q89 1820 aa12.86□□□□□ -0.35
COL1A1-210ENST00000504289 APAF1O14727 1248 aa12.86□□□□□ -0.35
COL1A1-210ENST00000504289 WAPLQ7Z5K2 1190 aa12.86□□□□□ -0.35
COL1A1-210ENST00000504289 TXNDC2Q86VQ3 553 aa12.86□□□□□ -0.35
COL1A1-210ENST00000504289 PTCH1Q13635 1447 aa12.86□□□□□ -0.35
COL1A1-210ENST00000504289 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-210ENST00000504289 NKTRP30414 1462 aaKnown RBP12.85□□□□□ -0.35
COL1A1-210ENST00000504289 IQSEC2Q5JU85 1478 aa12.85□□□□□ -0.35
COL1A1-210ENST00000504289 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
COL1A1-210ENST00000504289 NUDT16Q96DE0 195 aaKnown RBP12.84□□□□□ -0.35
COL1A1-210ENST00000504289 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
COL1A1-210ENST00000504289 COL3A1P02461 1466 aaPredicted RBP12.84□□□□□ -0.35
COL1A1-210ENST00000504289 LTKP29376 864 aa12.83□□□□□ -0.36
COL1A1-210ENST00000504289 CCDC136Q96JN2 1154 aa12.83□□□□□ -0.36
COL1A1-210ENST00000504289 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
COL1A1-210ENST00000504289 WWC1Q8IX03 1113 aa12.82□□□□□ -0.36
COL1A1-210ENST00000504289 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
COL1A1-210ENST00000504289 MON2Q7Z3U7 1717 aa12.82□□□□□ -0.36
COL1A1-210ENST00000504289 ROBO2Q9HCK4 1378 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms