RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 APAF1O14727 1248 aa22.56■■□□□ 1.2
POLR2J3-209ENST00000504157 RIPK4P57078 832 aa22.55■■□□□ 1.2
POLR2J3-209ENST00000504157 ASXL2Q76L83 1435 aa22.55■■□□□ 1.2
POLR2J3-209ENST00000504157 SCAF11Q99590 1463 aaKnown RBP22.54■■□□□ 1.2
POLR2J3-209ENST00000504157 A0A0U1RQG5 324 aaPredicted RBP22.53■■□□□ 1.2
POLR2J3-209ENST00000504157 CCDC146Q8IYE0 955 aa22.53■■□□□ 1.2
POLR2J3-209ENST00000504157 CDC42BPBQ9Y5S2 1711 aa22.52■■□□□ 1.2
POLR2J3-209ENST00000504157 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.51■■□□□ 1.19
POLR2J3-209ENST00000504157 FGD1P98174 961 aa22.51■■□□□ 1.19
POLR2J3-209ENST00000504157 ZSCAN30Q86W11 494 aa22.51■■□□□ 1.19
POLR2J3-209ENST00000504157 SMAP1Q8IYB5 467 aaPredicted RBP22.51■■□□□ 1.19
POLR2J3-209ENST00000504157 STAC3Q96MF2 364 aa22.51■■□□□ 1.19
POLR2J3-209ENST00000504157 DUOX2Q9NRD8 1548 aa22.51■■□□□ 1.19
POLR2J3-209ENST00000504157 GAS2L3Q86XJ1 694 aa22.5■■□□□ 1.19
POLR2J3-209ENST00000504157 PPP1R9BQ96SB3 815 aa22.5■■□□□ 1.19
POLR2J3-209ENST00000504157 COG6Q9Y2V7 657 aa22.5■■□□□ 1.19
POLR2J3-209ENST00000504157 CCDC173Q0VFZ6 552 aa22.49■■□□□ 1.19
POLR2J3-209ENST00000504157 SPRYD3Q8NCJ5 442 aa22.49■■□□□ 1.19
POLR2J3-209ENST00000504157 PANK1Q8TE04 598 aa22.49■■□□□ 1.19
POLR2J3-209ENST00000504157 ZNF692Q9BU19 519 aaPredicted RBP22.49■■□□□ 1.19
POLR2J3-209ENST00000504157 SLC24A1O60721 1099 aa22.48■■□□□ 1.19
POLR2J3-209ENST00000504157 RTEL1-TNFRSF6BF6WH68 1400 aa22.47■■□□□ 1.19
POLR2J3-209ENST00000504157 CANXP27824 592 aaKnown RBP22.47■■□□□ 1.19
POLR2J3-209ENST00000504157 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
POLR2J3-209ENST00000504157 TTC37Q6PGP7 1564 aa22.46■■□□□ 1.19
POLR2J3-209ENST00000504157 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
POLR2J3-209ENST00000504157 SYCP2Q9BX26 1530 aa22.46■■□□□ 1.19
POLR2J3-209ENST00000504157 SPHKAPQ2M3C7 1700 aa22.45■■□□□ 1.18
POLR2J3-209ENST00000504157 POLR3AO14802 1390 aaPredicted RBP22.45■■□□□ 1.18
POLR2J3-209ENST00000504157 WWC1Q8IX03 1113 aa22.45■■□□□ 1.18
POLR2J3-209ENST00000504157 PDZRN3Q9UPQ7 1066 aa22.45■■□□□ 1.18
POLR2J3-209ENST00000504157 DDIT3P35638 169 aa22.44■■□□□ 1.18
POLR2J3-209ENST00000504157 MTERF4Q7Z6M4 381 aaKnown RBP22.44■■□□□ 1.18
POLR2J3-209ENST00000504157 SKOR2Q2VWA4 1001 aaPredicted RBP22.43■■□□□ 1.18
POLR2J3-209ENST00000504157 RARSP54136 660 aaKnown RBP22.43■■□□□ 1.18
POLR2J3-209ENST00000504157 PCDHB15Q9Y5E8 787 aa22.43■■□□□ 1.18
POLR2J3-209ENST00000504157 NCOA3Q9Y6Q9 1424 aa22.43■■□□□ 1.18
POLR2J3-209ENST00000504157 RWDD1Q9H446 243 aaPredicted RBP22.42■■□□□ 1.18
POLR2J3-209ENST00000504157 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.42■■□□□ 1.18
POLR2J3-209ENST00000504157 PTMSP20962 102 aa22.41■■□□□ 1.18
POLR2J3-209ENST00000504157 FAM13BQ9NYF5 915 aa22.41■■□□□ 1.18
POLR2J3-209ENST00000504157 KIAA1210Q9ULL0 1709 aa22.41■■□□□ 1.18
POLR2J3-209ENST00000504157 CEP152O94986 1710 aa22.4■■□□□ 1.18
POLR2J3-209ENST00000504157 KANK1Q14678 1352 aa22.4■■□□□ 1.18
POLR2J3-209ENST00000504157 PHF23Q9BUL5 403 aaPredicted RBP22.39■■□□□ 1.18
POLR2J3-209ENST00000504157 C22orf23Q9BZE7 217 aa22.39■■□□□ 1.18
POLR2J3-209ENST00000504157 IQSEC2Q5JU85 1478 aa22.39■■□□□ 1.18
POLR2J3-209ENST00000504157 MSNP26038 577 aaKnown RBP22.39■■□□□ 1.17
POLR2J3-209ENST00000504157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.39■■□□□ 1.17
POLR2J3-209ENST00000504157 TRPM2O94759 1503 aa22.38■■□□□ 1.17
POLR2J3-209ENST00000504157 HS1BP3Q53T59 392 aa22.37■■□□□ 1.17
POLR2J3-209ENST00000504157 NCBP3Q53F19 620 aaKnown RBP22.37■■□□□ 1.17
POLR2J3-209ENST00000504157 HSCBQ8IWL3 235 aa22.37■■□□□ 1.17
POLR2J3-209ENST00000504157 GBP4Q96PP9 640 aa22.37■■□□□ 1.17
POLR2J3-209ENST00000504157 CIZ1Q9ULV3 898 aaPredicted RBP22.37■■□□□ 1.17
POLR2J3-209ENST00000504157 NASPP49321 788 aaPredicted RBP22.36■■□□□ 1.17
POLR2J3-209ENST00000504157 UTP14CQ5TAP6 766 aaKnown RBP22.36■■□□□ 1.17
POLR2J3-209ENST00000504157 WDR63Q8IWG1 891 aa22.36■■□□□ 1.17
POLR2J3-209ENST00000504157 TNPO1Q92973 898 aaKnown RBP22.35■■□□□ 1.17
POLR2J3-209ENST00000504157 RLBP1P12271 317 aa22.35■■□□□ 1.17
POLR2J3-209ENST00000504157 SHPRHQ149N8 1683 aa22.35■■□□□ 1.17
POLR2J3-209ENST00000504157 ANP32BQ92688 251 aaKnown RBP22.34■■□□□ 1.17
POLR2J3-209ENST00000504157 R3HCC1Q9Y3T6 440 aaKnown RBP22.34■■□□□ 1.17
POLR2J3-209ENST00000504157 NEURL4Q96JN8 1562 aa22.34■■□□□ 1.17
POLR2J3-209ENST00000504157 ZNF500O60304 480 aaPredicted RBP22.34■■□□□ 1.17
POLR2J3-209ENST00000504157 IBTKQ9P2D0 1353 aaPredicted RBP22.33■■□□□ 1.17
POLR2J3-209ENST00000504157 FAM69CQ0P6D2 419 aa22.33■■□□□ 1.17
POLR2J3-209ENST00000504157 ARHGAP5Q13017 1502 aa22.33■■□□□ 1.16
POLR2J3-209ENST00000504157 DYNC1I1O14576 645 aa22.33■■□□□ 1.16
POLR2J3-209ENST00000504157 CCDC27Q2M243 656 aa22.33■■□□□ 1.16
POLR2J3-209ENST00000504157 ERVK-7P63135 1459 aa22.32■■□□□ 1.16
POLR2J3-209ENST00000504157 PTPRTO14522 1441 aa22.32■■□□□ 1.16
POLR2J3-209ENST00000504157 SMC5Q8IY18 1101 aa22.32■■□□□ 1.16
POLR2J3-209ENST00000504157 ABCA9Q8IUA7 1624 aa22.31■■□□□ 1.16
POLR2J3-209ENST00000504157 RAB3GAP1Q15042 981 aa22.31■■□□□ 1.16
POLR2J3-209ENST00000504157 RUNDC1Q96C34 613 aa22.31■■□□□ 1.16
POLR2J3-209ENST00000504157 UQCRHLA0A096LP55 91 aa22.3■■□□□ 1.16
POLR2J3-209ENST00000504157 UQCRHP07919 91 aa22.3■■□□□ 1.16
POLR2J3-209ENST00000504157 SNX21Q969T3 373 aa22.3■■□□□ 1.16
POLR2J3-209ENST00000504157 MVPQ14764 893 aaKnown RBP22.3■■□□□ 1.16
POLR2J3-209ENST00000504157 NOL7Q9UMY1 257 aaKnown RBP22.3■■□□□ 1.16
POLR2J3-209ENST00000504157 DMTNQ08495 405 aa22.29■■□□□ 1.16
POLR2J3-209ENST00000504157 CARD14Q9BXL6 1004 aa22.29■■□□□ 1.16
POLR2J3-209ENST00000504157 PLCH2O75038 1416 aa22.28■■□□□ 1.16
POLR2J3-209ENST00000504157 DIP2BQ9P265 1576 aa22.28■■□□□ 1.16
POLR2J3-209ENST00000504157 CD109Q6YHK3 1445 aa22.28■■□□□ 1.16
POLR2J3-209ENST00000504157 HDAC1Q13547 482 aaPredicted RBP22.27■■□□□ 1.16
POLR2J3-209ENST00000504157 MFAP1P55081 439 aaKnown RBP22.27■■□□□ 1.16
POLR2J3-209ENST00000504157 SBNO2Q9Y2G9 1366 aa22.26■■□□□ 1.15
POLR2J3-209ENST00000504157 RBM25P49756 843 aaKnown RBP22.26■■□□□ 1.15
POLR2J3-209ENST00000504157 CT47B1P0C2W7 299 aaPredicted RBP22.26■■□□□ 1.15
POLR2J3-209ENST00000504157 CLTCL1P53675 1640 aa22.26■■□□□ 1.15
POLR2J3-209ENST00000504157 MYO3AQ8NEV4 1616 aa22.25■■□□□ 1.15
POLR2J3-209ENST00000504157 ZHX1Q9UKY1 873 aaPredicted RBP22.25■■□□□ 1.15
POLR2J3-209ENST00000504157 TNNQ9UQP3 1299 aa22.25■■□□□ 1.15
POLR2J3-209ENST00000504157 CSPP1Q1MSJ5 1256 aa22.24■■□□□ 1.15
POLR2J3-209ENST00000504157 EFCAB2Q5VUJ9 269 aa22.23■■□□□ 1.15
POLR2J3-209ENST00000504157 MYOM2P54296 1465 aa22.23■■□□□ 1.15
POLR2J3-209ENST00000504157 TCP11L2Q8N4U5 519 aa22.23■■□□□ 1.15
POLR2J3-209ENST00000504157 CCDC94Q9BW85 323 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms