RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 ATF3P18847 181 aa25.82■■□□□ 1.72
DDR1-252ENST00000504152 RALGAPBQ86X10 1494 aa25.8■■□□□ 1.72
DDR1-252ENST00000504152 SAFB2Q14151 953 aaKnown RBP eCLIP25.8■■□□□ 1.72
DDR1-252ENST00000504152 CADPS2Q86UW7 1296 aa25.79■■□□□ 1.72
DDR1-252ENST00000504152 GPRASP1Q5JY77 1395 aa25.79■■□□□ 1.72
DDR1-252ENST00000504152 PLEKHH1Q9ULM0 1364 aa25.79■■□□□ 1.72
DDR1-252ENST00000504152 SCAF1Q9H7N4 1312 aaKnown RBP25.78■■□□□ 1.72
DDR1-252ENST00000504152 ADGRL3Q9HAR2 1447 aa25.77■■□□□ 1.72
DDR1-252ENST00000504152 PIP4K2BP78356 416 aa25.76■■□□□ 1.71
DDR1-252ENST00000504152 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.74■■□□□ 1.71
DDR1-252ENST00000504152 SLAIN2Q9P270 581 aa25.74■■□□□ 1.71
DDR1-252ENST00000504152 CENPJQ9HC77 1338 aaPredicted RBP25.73■■□□□ 1.71
DDR1-252ENST00000504152 DCCP43146 1447 aa25.72■■□□□ 1.71
DDR1-252ENST00000504152 EIF3AQ14152 1382 aaKnown RBP25.72■■□□□ 1.71
DDR1-252ENST00000504152 ARHGEF28Q8N1W1 1705 aaKnown RBP25.71■■□□□ 1.71
DDR1-252ENST00000504152 MINK1Q8N4C8 1332 aaPredicted RBP25.71■■□□□ 1.71
DDR1-252ENST00000504152 NALCNQ8IZF0 1738 aa25.71■■□□□ 1.71
DDR1-252ENST00000504152 HIRIP3Q9BW71 556 aaPredicted RBP25.69■■□□□ 1.7
DDR1-252ENST00000504152 WASLO00401 505 aaPredicted RBP25.65■■□□□ 1.7
DDR1-252ENST00000504152 CDC42BPGQ6DT37 1551 aa25.62■■□□□ 1.69
DDR1-252ENST00000504152 NUTM2FA1L443 756 aa25.62■■□□□ 1.69
DDR1-252ENST00000504152 SLC24A1O60721 1099 aa25.62■■□□□ 1.69
DDR1-252ENST00000504152 ST20-MTHFSA0A0A6YYL1 179 aa25.61■■□□□ 1.69
DDR1-252ENST00000504152 CDK19Q9BWU1 502 aa25.61■■□□□ 1.69
DDR1-252ENST00000504152 MST1RQ04912 1400 aa25.61■■□□□ 1.69
DDR1-252ENST00000504152 HSPA1LP34931 641 aa25.6■■□□□ 1.69
DDR1-252ENST00000504152 USP47Q96K76 1375 aa25.59■■□□□ 1.69
DDR1-252ENST00000504152 ZEB1P37275 1124 aaPredicted RBP25.59■■□□□ 1.69
DDR1-252ENST00000504152 EVC2Q86UK5 1308 aa25.59■■□□□ 1.69
DDR1-252ENST00000504152 QRICH2Q9H0J4 1663 aa25.58■■□□□ 1.69
DDR1-252ENST00000504152 ADGRB2O60241 1585 aa25.57■■□□□ 1.68
DDR1-252ENST00000504152 EIF4G2P78344 907 aaKnown RBP eCLIP25.57■■□□□ 1.68
DDR1-252ENST00000504152 ESCO1Q5FWF5 840 aa25.57■■□□□ 1.68
DDR1-252ENST00000504152 C1orf167Q5SNV9 1468 aa25.57■■□□□ 1.68
DDR1-252ENST00000504152 FMN2Q9NZ56 1722 aa25.55■■□□□ 1.68
DDR1-252ENST00000504152 SRPK2P78362 688 aaKnown RBP25.55■■□□□ 1.68
DDR1-252ENST00000504152 BRINP3Q76B58 766 aa25.55■■□□□ 1.68
DDR1-252ENST00000504152 ORAI2Q96SN7 254 aa25.55■■□□□ 1.68
DDR1-252ENST00000504152 SBNO2Q9Y2G9 1366 aa25.55■■□□□ 1.68
DDR1-252ENST00000504152 NUDT16Q96DE0 195 aaKnown RBP25.53■■□□□ 1.68
DDR1-252ENST00000504152 MED1Q15648 1581 aaPredicted RBP25.52■■□□□ 1.68
DDR1-252ENST00000504152 TESK2Q96S53 571 aa25.51■■□□□ 1.67
DDR1-252ENST00000504152 CABP2Q9NPB3 220 aa25.51■■□□□ 1.67
DDR1-252ENST00000504152 ANKARQ7Z5J8 1434 aa25.51■■□□□ 1.67
DDR1-252ENST00000504152 ROBO1Q9Y6N7 1651 aa25.51■■□□□ 1.67
DDR1-252ENST00000504152 HSPA5P11021 654 aaKnown RBP25.49■■□□□ 1.67
DDR1-252ENST00000504152 PHF8Q9UPP1 1060 aa25.49■■□□□ 1.67
DDR1-252ENST00000504152 CCDC61Q9Y6R9 512 aa25.49■■□□□ 1.67
DDR1-252ENST00000504152 TULP4Q9NRJ4 1543 aa25.48■■□□□ 1.67
DDR1-252ENST00000504152 TMF1P82094 1093 aa25.48■■□□□ 1.67
DDR1-252ENST00000504152 RGPD8O14715 1765 aaPredicted RBP25.48■■□□□ 1.67
DDR1-252ENST00000504152 PRR36Q9H6K5 1346 aa25.47■■□□□ 1.67
DDR1-252ENST00000504152 PUS7Q96PZ0 661 aaKnown RBP25.45■■□□□ 1.66
DDR1-252ENST00000504152 FOXO3O43524 673 aa25.44■■□□□ 1.66
DDR1-252ENST00000504152 PMFBP1Q8TBY8 1022 aa25.44■■□□□ 1.66
DDR1-252ENST00000504152 CDCA8Q53HL2 280 aa25.43■■□□□ 1.66
DDR1-252ENST00000504152 USP32Q8NFA0 1604 aa25.43■■□□□ 1.66
DDR1-252ENST00000504152 NPHP3Q7Z494 1330 aa25.42■■□□□ 1.66
DDR1-252ENST00000504152 NGDNQ8NEJ9 315 aaKnown RBP25.42■■□□□ 1.66
DDR1-252ENST00000504152 PLEKHG3A1L390 1219 aa25.41■■□□□ 1.66
DDR1-252ENST00000504152 PSME1Q06323 249 aa25.41■■□□□ 1.66
DDR1-252ENST00000504152 DDX17Q92841 729 aaKnown RBP25.41■■□□□ 1.66
DDR1-252ENST00000504152 ATP7BP35670 1465 aa25.4■■□□□ 1.66
DDR1-252ENST00000504152 CABP1Q9NZU7 370 aa25.4■■□□□ 1.66
DDR1-252ENST00000504152 ATAD2Q6PL18 1390 aa25.4■■□□□ 1.66
DDR1-252ENST00000504152 ITSN1Q15811 1721 aa25.38■■□□□ 1.65
DDR1-252ENST00000504152 KRT28Q7Z3Y7 464 aa25.38■■□□□ 1.65
DDR1-252ENST00000504152 KIF1AQ12756 1690 aa25.38■■□□□ 1.65
DDR1-252ENST00000504152 LRRC59Q96AG4 307 aaKnown RBP25.37■■□□□ 1.65
DDR1-252ENST00000504152 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
DDR1-252ENST00000504152 PHLPP1O60346 1717 aa25.37■■□□□ 1.65
DDR1-252ENST00000504152 PPIP5K1Q6PFW1 1433 aa25.37■■□□□ 1.65
DDR1-252ENST00000504152 AHDC1Q5TGY3 1603 aaPredicted RBP25.36■■□□□ 1.65
DDR1-252ENST00000504152 SOS2Q07890 1332 aaPredicted RBP25.36■■□□□ 1.65
DDR1-252ENST00000504152 TMC1Q8TDI8 760 aa25.35■■□□□ 1.65
DDR1-252ENST00000504152 ACEP12821 1306 aa25.35■■□□□ 1.65
DDR1-252ENST00000504152 NHSL1Q5SYE7 1610 aa25.34■■□□□ 1.65
DDR1-252ENST00000504152 XPCQ01831 940 aaPredicted RBP25.33■■□□□ 1.65
DDR1-252ENST00000504152 ZNF692Q9BU19 519 aaPredicted RBP25.32■■□□□ 1.64
DDR1-252ENST00000504152 POLR3AO14802 1390 aaPredicted RBP25.31■■□□□ 1.64
DDR1-252ENST00000504152 TOPAZ1Q8N9V7 1692 aa25.3■■□□□ 1.64
DDR1-252ENST00000504152 SLC12A5Q9H2X9 1139 aa25.3■■□□□ 1.64
DDR1-252ENST00000504152 POLR3GLQ9BT43 218 aa25.29■■□□□ 1.64
DDR1-252ENST00000504152 COL16A1Q07092 1604 aaPredicted RBP25.27■■□□□ 1.64
DDR1-252ENST00000504152 HDGFL2Q7Z4V5 671 aaPredicted RBP25.27■■□□□ 1.64
DDR1-252ENST00000504152 TERF2IPQ9NYB0 399 aa25.27■■□□□ 1.64
DDR1-252ENST00000504152 PXDNQ92626 1479 aa25.27■■□□□ 1.64
DDR1-252ENST00000504152 PAK3O75914 559 aaPredicted RBP25.26■■□□□ 1.63
DDR1-252ENST00000504152 JCADQ9P266 1359 aa25.26■■□□□ 1.63
DDR1-252ENST00000504152 NINLQ9Y2I6 1382 aa25.26■■□□□ 1.63
DDR1-252ENST00000504152 SBNO1A3KN83 1393 aa25.25■■□□□ 1.63
DDR1-252ENST00000504152 SPATA31A3Q5VYP0 1347 aa25.24■■□□□ 1.63
DDR1-252ENST00000504152 C11orf95C9JLR9 678 aaPredicted RBP25.24■■□□□ 1.63
DDR1-252ENST00000504152 LMOD2Q6P5Q4 547 aa25.24■■□□□ 1.63
DDR1-252ENST00000504152 BRD4O60885 1362 aaPredicted RBP25.21■■□□□ 1.63
DDR1-252ENST00000504152 CPSF1Q10570 1443 aaKnown RBP25.2■■□□□ 1.63
DDR1-252ENST00000504152 KTN1Q86UP2 1357 aaKnown RBP25.2■■□□□ 1.63
DDR1-252ENST00000504152 USP6P35125 1406 aa25.18■■□□□ 1.62
DDR1-252ENST00000504152 ABTB2Q8N961 1025 aa25.17■■□□□ 1.62
DDR1-252ENST00000504152 TNS3Q68CZ2 1445 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms