RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 C14orf93Q9H972 538 aaKnown RBP19.32■□□□□ 0.68
SNF8-203ENST00000504000 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
SNF8-203ENST00000504000 ADGRB1O14514 1584 aa19.31■□□□□ 0.68
SNF8-203ENST00000504000 ZNF518AQ6AHZ1 1483 aa19.31■□□□□ 0.68
SNF8-203ENST00000504000 IGHDP01880 384 aa19.31■□□□□ 0.68
SNF8-203ENST00000504000 RGS3P49796 1198 aa19.31■□□□□ 0.68
SNF8-203ENST00000504000 NOS1P29475 1434 aa19.3■□□□□ 0.68
SNF8-203ENST00000504000 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
SNF8-203ENST00000504000 PPLO60437 1756 aa19.3■□□□□ 0.68
SNF8-203ENST00000504000 MORC1Q86VD1 984 aa19.29■□□□□ 0.68
SNF8-203ENST00000504000 NSD2O96028 1365 aa19.29■□□□□ 0.68
SNF8-203ENST00000504000 PMFBP1Q8TBY8 1022 aa19.28■□□□□ 0.68
SNF8-203ENST00000504000 QRICH2Q9H0J4 1663 aa19.28■□□□□ 0.68
SNF8-203ENST00000504000 RARSP54136 660 aaKnown RBP19.27■□□□□ 0.68
SNF8-203ENST00000504000 USP19O94966 1318 aa19.26■□□□□ 0.67
SNF8-203ENST00000504000 MLH3Q9UHC1 1453 aa19.24■□□□□ 0.67
SNF8-203ENST00000504000 NPATQ14207 1427 aa19.24■□□□□ 0.67
SNF8-203ENST00000504000 CANXP27824 592 aaKnown RBP19.24■□□□□ 0.67
SNF8-203ENST00000504000 SLC4A3P48751 1232 aa19.24■□□□□ 0.67
SNF8-203ENST00000504000 CT47B1P0C2W7 299 aaPredicted RBP19.24■□□□□ 0.67
SNF8-203ENST00000504000 TCP11L2Q8N4U5 519 aa19.24■□□□□ 0.67
SNF8-203ENST00000504000 CFAP53Q96M91 514 aa19.24■□□□□ 0.67
SNF8-203ENST00000504000 ASXL2Q76L83 1435 aa19.23■□□□□ 0.67
SNF8-203ENST00000504000 COG6Q9Y2V7 657 aa19.23■□□□□ 0.67
SNF8-203ENST00000504000 CFAP74Q9C0B2 1584 aa19.23■□□□□ 0.67
SNF8-203ENST00000504000 PANK1Q8TE04 598 aa19.22■□□□□ 0.67
SNF8-203ENST00000504000 BECN1Q14457 450 aa19.21■□□□□ 0.67
SNF8-203ENST00000504000 SLC12A5Q9H2X9 1139 aa19.21■□□□□ 0.67
SNF8-203ENST00000504000 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
SNF8-203ENST00000504000 ADGRB2O60241 1585 aa19.21■□□□□ 0.67
SNF8-203ENST00000504000 HECW2Q9P2P5 1572 aa19.21■□□□□ 0.67
SNF8-203ENST00000504000 NLRP1Q9C000 1473 aa19.2■□□□□ 0.66
SNF8-203ENST00000504000 MYH16Q9H6N6 1097 aa19.2■□□□□ 0.66
SNF8-203ENST00000504000 TRAK1Q9UPV9 953 aa19.2■□□□□ 0.66
SNF8-203ENST00000504000 FRMPD1Q5SYB0 1578 aa19.19■□□□□ 0.66
SNF8-203ENST00000504000 IL27Q8NEV9 243 aa19.19■□□□□ 0.66
SNF8-203ENST00000504000 POGZQ7Z3K3 1410 aa19.18■□□□□ 0.66
SNF8-203ENST00000504000 EVC2Q86UK5 1308 aa19.18■□□□□ 0.66
SNF8-203ENST00000504000 MTHFSP49914 203 aa19.18■□□□□ 0.66
SNF8-203ENST00000504000 FRAT1Q92837 279 aaPredicted RBP19.17■□□□□ 0.66
SNF8-203ENST00000504000 RWDD1Q9H446 243 aaPredicted RBP19.17■□□□□ 0.66
SNF8-203ENST00000504000 GLI2P10070 1586 aa19.17■□□□□ 0.66
SNF8-203ENST00000504000 PIK3C2BO00750 1634 aa19.16■□□□□ 0.66
SNF8-203ENST00000504000 ABCC3O15438 1527 aa19.16■□□□□ 0.66
SNF8-203ENST00000504000 ARHGEF28Q8N1W1 1705 aaKnown RBP19.15■□□□□ 0.66
SNF8-203ENST00000504000 FRAT2O75474 233 aaPredicted RBP19.15■□□□□ 0.66
SNF8-203ENST00000504000 PCDHB15Q9Y5E8 787 aa19.15■□□□□ 0.66
SNF8-203ENST00000504000 ZFYVE9O95405 1425 aa19.15■□□□□ 0.66
SNF8-203ENST00000504000 TULP4Q9NRJ4 1543 aa19.14■□□□□ 0.65
SNF8-203ENST00000504000 VGFO15240 615 aaPredicted RBP19.14■□□□□ 0.65
SNF8-203ENST00000504000 UPF2Q9HAU5 1272 aaKnown RBP19.14■□□□□ 0.65
SNF8-203ENST00000504000 RLBP1P12271 317 aa19.13■□□□□ 0.65
SNF8-203ENST00000504000 CAMSAP1Q5T5Y3 1602 aa19.12■□□□□ 0.65
SNF8-203ENST00000504000 SEC24BO95487 1268 aa19.12■□□□□ 0.65
SNF8-203ENST00000504000 MVPQ14764 893 aaKnown RBP19.12■□□□□ 0.65
SNF8-203ENST00000504000 TBC1D32Q96NH3 1257 aa19.12■□□□□ 0.65
SNF8-203ENST00000504000 NEXMIFQ5QGS0 1516 aa19.12■□□□□ 0.65
SNF8-203ENST00000504000 ARHGAP31Q2M1Z3 1444 aa19.12■□□□□ 0.65
SNF8-203ENST00000504000 MED14O60244 1454 aa19.12■□□□□ 0.65
SNF8-203ENST00000504000 CHGAP10645 457 aaKnown RBP19.11■□□□□ 0.65
SNF8-203ENST00000504000 NEUROD2Q15784 382 aa19.11■□□□□ 0.65
SNF8-203ENST00000504000 RRP7AQ9Y3A4 280 aaKnown RBP19.11■□□□□ 0.65
SNF8-203ENST00000504000 ABCC11Q96J66 1382 aa19.11■□□□□ 0.65
SNF8-203ENST00000504000 ZKSCAN2Q63HK3 967 aa19.11■□□□□ 0.65
SNF8-203ENST00000504000 PDZRN3Q9UPQ7 1066 aa19.11■□□□□ 0.65
SNF8-203ENST00000504000 IL16Q14005 1332 aa19.11■□□□□ 0.65
SNF8-203ENST00000504000 TMEM132EQ6IEE7 984 aa19.09■□□□□ 0.65
SNF8-203ENST00000504000 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
SNF8-203ENST00000504000 ANTXR1Q9H6X2 564 aa19.08■□□□□ 0.65
SNF8-203ENST00000504000 CD109Q6YHK3 1445 aa19.08■□□□□ 0.64
SNF8-203ENST00000504000 HDAC1Q13547 482 aaPredicted RBP19.07■□□□□ 0.64
SNF8-203ENST00000504000 DZIP1LQ8IYY4 767 aaKnown RBP19.07■□□□□ 0.64
SNF8-203ENST00000504000 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
SNF8-203ENST00000504000 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
SNF8-203ENST00000504000 PLEKHF1Q96S99 279 aa19.07■□□□□ 0.64
SNF8-203ENST00000504000 COL3A1P02461 1466 aaPredicted RBP19.06■□□□□ 0.64
SNF8-203ENST00000504000 SIGLEC1Q9BZZ2 1709 aa19.05■□□□□ 0.64
SNF8-203ENST00000504000 GGT6Q6P531 493 aa19.05■□□□□ 0.64
SNF8-203ENST00000504000 BRPF3Q9ULD4 1205 aa19.05■□□□□ 0.64
SNF8-203ENST00000504000 ANKRD26Q9UPS8 1709 aa19.04■□□□□ 0.64
SNF8-203ENST00000504000 DDX19BQ9UMR2 479 aa19.04■□□□□ 0.64
SNF8-203ENST00000504000 NEO1Q92859 1461 aa19.04■□□□□ 0.64
SNF8-203ENST00000504000 FTSJ3Q8IY81 847 aaKnown RBP19.03■□□□□ 0.64
SNF8-203ENST00000504000 PNNQ9H307 717 aaKnown RBP19.03■□□□□ 0.64
SNF8-203ENST00000504000 TNNQ9UQP3 1299 aa19.03■□□□□ 0.64
SNF8-203ENST00000504000 ATAD2Q6PL18 1390 aa19.03■□□□□ 0.64
SNF8-203ENST00000504000 SLC52A1Q9NWF4 448 aa19.03■□□□□ 0.64
SNF8-203ENST00000504000 A0A1W2PP64 1363 aa19.02■□□□□ 0.64
SNF8-203ENST00000504000 CLTCQ00610 1675 aaKnown RBP19.02■□□□□ 0.64
SNF8-203ENST00000504000 NPM1P06748 294 aaKnown RBP eCLIP19.02■□□□□ 0.64
SNF8-203ENST00000504000 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
SNF8-203ENST00000504000 BCL2L13Q9BXK5 485 aa19.01■□□□□ 0.63
SNF8-203ENST00000504000 CFAP65Q6ZU64 1925 aaKnown RBP19.01■□□□□ 0.63
SNF8-203ENST00000504000 TBC1D2Q9BYX2 928 aa19.01■□□□□ 0.63
SNF8-203ENST00000504000 PNPLA6Q8IY17 1366 aa19■□□□□ 0.63
SNF8-203ENST00000504000 ATF7IPQ6VMQ6 1270 aa19■□□□□ 0.63
SNF8-203ENST00000504000 SMC5Q8IY18 1101 aa19■□□□□ 0.63
SNF8-203ENST00000504000 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
SNF8-203ENST00000504000 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
SNF8-203ENST00000504000 TRIM27P14373 513 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms