RNA–Protein interactions for RNA: ENST00000503979.1

APBB3-208, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-208ENST00000503979 TONSLQ96HA7 1378 aa27.34■■□□□ 1.97
APBB3-208ENST00000503979 PRAM1Q96QH2 718 aa27.33■■□□□ 1.97
APBB3-208ENST00000503979 C1orf167Q5SNV9 1468 aa27.32■■□□□ 1.96
APBB3-208ENST00000503979 TRAK1Q9UPV9 953 aa27.32■■□□□ 1.96
APBB3-208ENST00000503979 AHDC1Q5TGY3 1603 aaPredicted RBP27.31■■□□□ 1.96
APBB3-208ENST00000503979 TRPM1Q7Z4N2 1603 aa27.31■■□□□ 1.96
APBB3-208ENST00000503979 BRINP3Q76B58 766 aa27.31■■□□□ 1.96
APBB3-208ENST00000503979 ARHGEF28Q8N1W1 1705 aaKnown RBP27.3■■□□□ 1.96
APBB3-208ENST00000503979 ADGRB2O60241 1585 aa27.3■■□□□ 1.96
APBB3-208ENST00000503979 NBPF1Q3BBV0 1214 aa27.29■■□□□ 1.96
APBB3-208ENST00000503979 POGKQ9P215 609 aa27.28■■□□□ 1.96
APBB3-208ENST00000503979 FMN2Q9NZ56 1722 aa27.27■■□□□ 1.96
APBB3-208ENST00000503979 PHLPP1O60346 1717 aa27.25■■□□□ 1.95
APBB3-208ENST00000503979 TIMELESSQ9UNS1 1208 aa27.25■■□□□ 1.95
APBB3-208ENST00000503979 NHSL1Q5SYE7 1610 aa27.24■■□□□ 1.95
APBB3-208ENST00000503979 COL16A1Q07092 1604 aaPredicted RBP27.23■■□□□ 1.95
APBB3-208ENST00000503979 GPRASP1Q5JY77 1395 aa27.22■■□□□ 1.95
APBB3-208ENST00000503979 NBPF8Q3BBV2 869 aa27.22■■□□□ 1.95
APBB3-208ENST00000503979 SAFB2Q14151 953 aaKnown RBP eCLIP27.19■■□□□ 1.94
APBB3-208ENST00000503979 ROCK2O75116 1388 aaKnown RBP27.19■■□□□ 1.94
APBB3-208ENST00000503979 ANKARQ7Z5J8 1434 aa27.18■■□□□ 1.94
APBB3-208ENST00000503979 ORAI2Q96SN7 254 aa27.18■■□□□ 1.94
APBB3-208ENST00000503979 RALGAPBQ86X10 1494 aa27.18■■□□□ 1.94
APBB3-208ENST00000503979 EIF3AQ14152 1382 aaKnown RBP27.17■■□□□ 1.94
APBB3-208ENST00000503979 JCADQ9P266 1359 aa27.15■■□□□ 1.94
APBB3-208ENST00000503979 WASLO00401 505 aaPredicted RBP27.14■■□□□ 1.94
APBB3-208ENST00000503979 ESCO1Q5FWF5 840 aa27.14■■□□□ 1.94
APBB3-208ENST00000503979 KIF1AQ12756 1690 aa27.14■■□□□ 1.93
APBB3-208ENST00000503979 MINK1Q8N4C8 1332 aaPredicted RBP27.14■■□□□ 1.93
APBB3-208ENST00000503979 SOS2Q07890 1332 aaPredicted RBP27.13■■□□□ 1.93
APBB3-208ENST00000503979 CENPJQ9HC77 1338 aaPredicted RBP27.13■■□□□ 1.93
APBB3-208ENST00000503979 TULP4Q9NRJ4 1543 aa27.12■■□□□ 1.93
APBB3-208ENST00000503979 USP32Q8NFA0 1604 aa27.12■■□□□ 1.93
APBB3-208ENST00000503979 CCER1Q8TC90 406 aaPredicted RBP27.11■■□□□ 1.93
APBB3-208ENST00000503979 LRRC59Q96AG4 307 aaKnown RBP27.1■■□□□ 1.93
APBB3-208ENST00000503979 HIRIP3Q9BW71 556 aaPredicted RBP27.1■■□□□ 1.93
APBB3-208ENST00000503979 SHPRHQ149N8 1683 aa27.1■■□□□ 1.93
APBB3-208ENST00000503979 NPHP3Q7Z494 1330 aa27.1■■□□□ 1.93
APBB3-208ENST00000503979 RGPD8O14715 1765 aaPredicted RBP27.09■■□□□ 1.93
APBB3-208ENST00000503979 NUTM2FA1L443 756 aa27.08■■□□□ 1.93
APBB3-208ENST00000503979 MED1Q15648 1581 aaPredicted RBP27.08■■□□□ 1.93
APBB3-208ENST00000503979 QRICH2Q9H0J4 1663 aa27.07■■□□□ 1.92
APBB3-208ENST00000503979 PXDNQ92626 1479 aa27.06■■□□□ 1.92
APBB3-208ENST00000503979 DDX17Q92841 729 aaKnown RBP27.05■■□□□ 1.92
APBB3-208ENST00000503979 CARD11Q9BXL7 1154 aa27.05■■□□□ 1.92
APBB3-208ENST00000503979 PHF8Q9UPP1 1060 aa27.05■■□□□ 1.92
APBB3-208ENST00000503979 SPATA31A6Q5VVP1 1343 aa27.05■■□□□ 1.92
APBB3-208ENST00000503979 PRR36Q9H6K5 1346 aa27.04■■□□□ 1.92
APBB3-208ENST00000503979 FOXO3O43524 673 aa27.03■■□□□ 1.92
APBB3-208ENST00000503979 ATP7BP35670 1465 aa27.03■■□□□ 1.92
APBB3-208ENST00000503979 SBNO2Q9Y2G9 1366 aa27.03■■□□□ 1.92
APBB3-208ENST00000503979 CDK19Q9BWU1 502 aa27.02■■□□□ 1.92
APBB3-208ENST00000503979 ITSN1Q15811 1721 aa27.02■■□□□ 1.92
APBB3-208ENST00000503979 PNPLA6Q8IY17 1366 aa26.98■■□□□ 1.91
APBB3-208ENST00000503979 NUDT16Q96DE0 195 aaKnown RBP26.98■■□□□ 1.91
APBB3-208ENST00000503979 TOPAZ1Q8N9V7 1692 aa26.98■■□□□ 1.91
APBB3-208ENST00000503979 CCDC61Q9Y6R9 512 aa26.96■■□□□ 1.91
APBB3-208ENST00000503979 COL22A1Q8NFW1 1626 aaPredicted RBP26.96■■□□□ 1.91
APBB3-208ENST00000503979 DISP3Q9P2K9 1392 aa26.96■■□□□ 1.91
APBB3-208ENST00000503979 EVC2Q86UK5 1308 aa26.94■■□□□ 1.9
APBB3-208ENST00000503979 PSME1Q06323 249 aa26.94■■□□□ 1.9
APBB3-208ENST00000503979 SBNO1A3KN83 1393 aa26.94■■□□□ 1.9
APBB3-208ENST00000503979 KRT28Q7Z3Y7 464 aa26.93■■□□□ 1.9
APBB3-208ENST00000503979 PLEKHG3A1L390 1219 aa26.92■■□□□ 1.9
APBB3-208ENST00000503979 PMFBP1Q8TBY8 1022 aa26.92■■□□□ 1.9
APBB3-208ENST00000503979 SPATA31A3Q5VYP0 1347 aa26.91■■□□□ 1.9
APBB3-208ENST00000503979 LRP6O75581 1613 aa26.91■■□□□ 1.9
APBB3-208ENST00000503979 POLR3AO14802 1390 aaPredicted RBP26.91■■□□□ 1.9
APBB3-208ENST00000503979 SLC24A1O60721 1099 aa26.9■■□□□ 1.9
APBB3-208ENST00000503979 SRPK2P78362 688 aaKnown RBP26.9■■□□□ 1.9
APBB3-208ENST00000503979 XPCQ01831 940 aaPredicted RBP26.89■■□□□ 1.9
APBB3-208ENST00000503979 TNS3Q68CZ2 1445 aa26.88■■□□□ 1.89
APBB3-208ENST00000503979 TRPM3Q9HCF6 1732 aaPredicted RBP26.87■■□□□ 1.89
APBB3-208ENST00000503979 CABP2Q9NPB3 220 aa26.87■■□□□ 1.89
APBB3-208ENST00000503979 NGDNQ8NEJ9 315 aaKnown RBP26.86■■□□□ 1.89
APBB3-208ENST00000503979 PPIP5K1Q6PFW1 1433 aa26.85■■□□□ 1.89
APBB3-208ENST00000503979 PUS7Q96PZ0 661 aaKnown RBP26.85■■□□□ 1.89
APBB3-208ENST00000503979 PHF23Q9BUL5 403 aaPredicted RBP26.84■■□□□ 1.89
APBB3-208ENST00000503979 ARHGEF10O15013 1369 aa26.84■■□□□ 1.89
APBB3-208ENST00000503979 ATAD2Q6PL18 1390 aa26.84■■□□□ 1.89
APBB3-208ENST00000503979 USP47Q96K76 1375 aa26.84■■□□□ 1.89
APBB3-208ENST00000503979 TESK2Q96S53 571 aa26.83■■□□□ 1.89
APBB3-208ENST00000503979 ST20-MTHFSA0A0A6YYL1 179 aa26.82■■□□□ 1.88
APBB3-208ENST00000503979 ACEP12821 1306 aa26.82■■□□□ 1.88
APBB3-208ENST00000503979 ALS2Q96Q42 1657 aa26.82■■□□□ 1.88
APBB3-208ENST00000503979 BRD4O60885 1362 aaPredicted RBP26.82■■□□□ 1.88
APBB3-208ENST00000503979 NUTM2BA6NNL0 878 aaPredicted RBP26.79■■□□□ 1.88
APBB3-208ENST00000503979 NUTM2EB1AL46 878 aaPredicted RBP26.79■■□□□ 1.88
APBB3-208ENST00000503979 NUTM2AQ8IVF1 878 aaPredicted RBP26.79■■□□□ 1.88
APBB3-208ENST00000503979 RGS17Q9UGC6 210 aaPredicted RBP26.79■■□□□ 1.88
APBB3-208ENST00000503979 CABP1Q9NZU7 370 aa26.78■■□□□ 1.88
APBB3-208ENST00000503979 MEX3CQ5U5Q3 659 aaKnown RBP26.77■■□□□ 1.88
APBB3-208ENST00000503979 MARF1Q9Y4F3 1742 aaKnown RBP26.73■■□□□ 1.87
APBB3-208ENST00000503979 ZNF692Q9BU19 519 aaPredicted RBP26.73■■□□□ 1.87
APBB3-208ENST00000503979 USP6P35125 1406 aa26.72■■□□□ 1.87
APBB3-208ENST00000503979 CPSF1Q10570 1443 aaKnown RBP26.72■■□□□ 1.87
APBB3-208ENST00000503979 ABCA3Q99758 1704 aa26.71■■□□□ 1.87
APBB3-208ENST00000503979 ZNF772Q68DY9 489 aaPredicted RBP26.71■■□□□ 1.87
APBB3-208ENST00000503979 SSH2Q76I76 1423 aa26.71■■□□□ 1.87
APBB3-208ENST00000503979 AKAP12Q02952 1782 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms