RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
UBE3D-205ENST00000503942 ZBTB24O43167 697 aaPredicted RBP11.16□□□□□ -0.62
UBE3D-205ENST00000503942 WFS1O76024 890 aa11.16□□□□□ -0.62
UBE3D-205ENST00000503942 WNT7AO00755 349 aa11.15□□□□□ -0.62
UBE3D-205ENST00000503942 GRIPAP1Q4V328 841 aa11.14□□□□□ -0.63
UBE3D-205ENST00000503942 TRIM32Q13049 653 aa11.13□□□□□ -0.63
UBE3D-205ENST00000503942 SMPD1P17405 629 aa11.12□□□□□ -0.63
UBE3D-205ENST00000503942 MMP16P51512 607 aa11.12□□□□□ -0.63
UBE3D-205ENST00000503942 NFX1Q12986 1120 aaKnown RBP11.12□□□□□ -0.63
UBE3D-205ENST00000503942 SNIP1Q8TAD8 396 aaKnown RBP11.12□□□□□ -0.63
UBE3D-205ENST00000503942 Q3C1V9 767 aa11.11□□□□□ -0.63
UBE3D-205ENST00000503942 ATP13A2Q9NQ11 1180 aa11.09□□□□□ -0.63
UBE3D-205ENST00000503942 WIPF1O43516 503 aa11.08□□□□□ -0.64
UBE3D-205ENST00000503942 MRGPRX2Q96LB1 330 aa11.08□□□□□ -0.64
UBE3D-205ENST00000503942 J3QL48 77 aa11.06□□□□□ -0.64
UBE3D-205ENST00000503942 DXOO77932 396 aaKnown RBP11.06□□□□□ -0.64
UBE3D-205ENST00000503942 CD46P15529 392 aa11.06□□□□□ -0.64
UBE3D-205ENST00000503942 GPIHBP1Q8IV16 184 aa11.06□□□□□ -0.64
UBE3D-205ENST00000503942 STK17AQ9UEE5 414 aa11.06□□□□□ -0.64
UBE3D-205ENST00000503942 SNRPBP14678 240 aaKnown RBP11.05□□□□□ -0.64
UBE3D-205ENST00000503942 TRIM47Q96LD4 638 aa11.05□□□□□ -0.64
UBE3D-205ENST00000503942 USB1Q9BQ65 265 aaKnown RBP11.05□□□□□ -0.64
UBE3D-205ENST00000503942 REPIN1Q9BWE0 567 aaKnown RBP11.05□□□□□ -0.64
UBE3D-205ENST00000503942 SENP2Q9HC62 589 aa11.03□□□□□ -0.64
UBE3D-205ENST00000503942 KDM4AO75164 1064 aa11.02□□□□□ -0.65
UBE3D-205ENST00000503942 INSM1Q01101 510 aaPredicted RBP11.02□□□□□ -0.65
UBE3D-205ENST00000503942 LCE2CQ5TA81 110 aa11.02□□□□□ -0.65
UBE3D-205ENST00000503942 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
UBE3D-205ENST00000503942 HPS1Q92902 700 aa11.01□□□□□ -0.65
UBE3D-205ENST00000503942 TERTO14746 1132 aaKnown RBP11□□□□□ -0.65
UBE3D-205ENST00000503942 USP46P62068 366 aa11□□□□□ -0.65
UBE3D-205ENST00000503942 WNT7BP56706 349 aa10.99□□□□□ -0.65
UBE3D-205ENST00000503942 SKOR1P84550 965 aa10.99□□□□□ -0.65
UBE3D-205ENST00000503942 MAP2K5Q13163 448 aa10.98□□□□□ -0.65
UBE3D-205ENST00000503942 RC3H1Q5TC82 1133 aaKnown RBP10.98□□□□□ -0.65
UBE3D-205ENST00000503942 HLA-CQ95604 372 aa10.97□□□□□ -0.65
UBE3D-205ENST00000503942 KIFC2Q96AC6 838 aa10.97□□□□□ -0.65
UBE3D-205ENST00000503942 CCDC24Q8N4L8 307 aa10.96□□□□□ -0.65
UBE3D-205ENST00000503942 HOXA2O43364 376 aa10.95□□□□□ -0.66
UBE3D-205ENST00000503942 MDM2Q00987 491 aaPredicted RBP10.93□□□□□ -0.66
UBE3D-205ENST00000503942 JUNDP17535 347 aa10.92□□□□□ -0.66
UBE3D-205ENST00000503942 IRF6O14896 467 aa10.91□□□□□ -0.66
UBE3D-205ENST00000503942 ALDH1A1P00352 501 aa10.9□□□□□ -0.66
UBE3D-205ENST00000503942 GUCA2AQ02747 115 aa10.9□□□□□ -0.66
UBE3D-205ENST00000503942 SIAH2O43255 324 aa10.87□□□□□ -0.67
UBE3D-205ENST00000503942 RETREG3Q86VR2 466 aa10.87□□□□□ -0.67
UBE3D-205ENST00000503942 MINK1Q8N4C8 1332 aaPredicted RBP10.86□□□□□ -0.67
UBE3D-205ENST00000503942 SYMPKQ92797 1274 aaKnown RBP10.86□□□□□ -0.67
UBE3D-205ENST00000503942 NUDT12Q9BQG2 462 aa10.86□□□□□ -0.67
UBE3D-205ENST00000503942 EHBP1Q8NDI1 1231 aa10.85□□□□□ -0.67
UBE3D-205ENST00000503942 BMP1P13497 986 aa10.84□□□□□ -0.67
UBE3D-205ENST00000503942 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
UBE3D-205ENST00000503942 TRIM46Q7Z4K8 759 aa10.84□□□□□ -0.67
UBE3D-205ENST00000503942 SLC16A10Q8TF71 515 aa10.84□□□□□ -0.67
UBE3D-205ENST00000503942 CCDC102AQ96A19 550 aa10.84□□□□□ -0.67
UBE3D-205ENST00000503942 GPCPD1Q9NPB8 672 aa10.84□□□□□ -0.67
UBE3D-205ENST00000503942 FAM217BQ9NTX9 383 aaPredicted RBP10.84□□□□□ -0.67
UBE3D-205ENST00000503942 NXF1Q9UBU9 619 aaKnown RBP10.84□□□□□ -0.67
UBE3D-205ENST00000503942 HAP1P54257 671 aaPredicted RBP10.83□□□□□ -0.68
UBE3D-205ENST00000503942 CLCN1P35523 988 aa10.82□□□□□ -0.68
UBE3D-205ENST00000503942 CAPN5O15484 640 aaPredicted RBP10.81□□□□□ -0.68
UBE3D-205ENST00000503942 NPAS3Q8IXF0 933 aa10.81□□□□□ -0.68
UBE3D-205ENST00000503942 WASF2Q9Y6W5 498 aa10.81□□□□□ -0.68
UBE3D-205ENST00000503942 SH3BP2P78314 561 aa10.8□□□□□ -0.68
UBE3D-205ENST00000503942 NUTM1Q86Y26 1132 aa10.8□□□□□ -0.68
UBE3D-205ENST00000503942 CCNYL3P0C7X3 344 aa10.79□□□□□ -0.68
UBE3D-205ENST00000503942 MS4A1P11836 297 aa10.79□□□□□ -0.68
UBE3D-205ENST00000503942 GMPRP36959 345 aa10.79□□□□□ -0.68
UBE3D-205ENST00000503942 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
UBE3D-205ENST00000503942 TULP1O00294 542 aaPredicted RBP10.78□□□□□ -0.68
UBE3D-205ENST00000503942 FDX1P10109 184 aa10.78□□□□□ -0.68
UBE3D-205ENST00000503942 IRF7Q92985 503 aa10.78□□□□□ -0.68
UBE3D-205ENST00000503942 PCDHGC3Q9UN70 934 aa10.78□□□□□ -0.68
UBE3D-205ENST00000503942 LORP23490 312 aaPredicted RBP10.77□□□□□ -0.69
UBE3D-205ENST00000503942 H3BM21 787 aa10.76□□□□□ -0.69
UBE3D-205ENST00000503942 C6orf229H3BNL8 230 aa10.76□□□□□ -0.69
UBE3D-205ENST00000503942 PTPRNQ16849 979 aa10.75□□□□□ -0.69
UBE3D-205ENST00000503942 KDM2AQ9Y2K7 1162 aa10.75□□□□□ -0.69
UBE3D-205ENST00000503942 ZSCAN1Q8NBB4 408 aa10.74□□□□□ -0.69
UBE3D-205ENST00000503942 UNC93B1Q9H1C4 597 aa10.74□□□□□ -0.69
UBE3D-205ENST00000503942 TLL2Q9Y6L7 1015 aa10.74□□□□□ -0.69
UBE3D-205ENST00000503942 VEGFBP49765 207 aa10.73□□□□□ -0.69
UBE3D-205ENST00000503942 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
UBE3D-205ENST00000503942 ZFP42Q96MM3 310 aa10.72□□□□□ -0.69
UBE3D-205ENST00000503942 EVA1BQ9NVM1 165 aa10.72□□□□□ -0.69
UBE3D-205ENST00000503942 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
UBE3D-205ENST00000503942 LINC01559Q495D7 138 aa10.71□□□□□ -0.69
UBE3D-205ENST00000503942 MPNDQ8N594 471 aa10.7□□□□□ -0.7
UBE3D-205ENST00000503942 ZNF511Q8NB15 262 aa10.7□□□□□ -0.7
UBE3D-205ENST00000503942 SPIRE2Q8WWL2 714 aa10.7□□□□□ -0.7
UBE3D-205ENST00000503942 BAP1Q92560 729 aa10.7□□□□□ -0.7
UBE3D-205ENST00000503942 KCNH2Q12809 1159 aa10.69□□□□□ -0.7
UBE3D-205ENST00000503942 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
UBE3D-205ENST00000503942 VARSP26640 1264 aaKnown RBP10.68□□□□□ -0.7
UBE3D-205ENST00000503942 NNTQ13423 1086 aa10.68□□□□□ -0.7
UBE3D-205ENST00000503942 VSIG10Q8N0Z9 540 aa10.68□□□□□ -0.7
UBE3D-205ENST00000503942 DESI1Q6ICB0 168 aa10.67□□□□□ -0.7
UBE3D-205ENST00000503942 MRPL14Q6P1L8 145 aaKnown RBP10.67□□□□□ -0.7
UBE3D-205ENST00000503942 PRR7Q8TB68 274 aa10.67□□□□□ -0.7
UBE3D-205ENST00000503942 MOXD2PA6NHM9 499 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms