RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 CCDC125Q86Z20 511 aa23.97■■□□□ 1.43
DDR1-250ENST00000503628 MYOM2P54296 1465 aa23.96■■□□□ 1.43
DDR1-250ENST00000503628 ESCO1Q5FWF5 840 aa23.96■■□□□ 1.43
DDR1-250ENST00000503628 PPARGC1BQ86YN6 1023 aaKnown RBP23.96■■□□□ 1.43
DDR1-250ENST00000503628 HFM1A2PYH4 1435 aa23.95■■□□□ 1.42
DDR1-250ENST00000503628 NPHP3Q7Z494 1330 aa23.95■■□□□ 1.42
DDR1-250ENST00000503628 PRAG1Q86YV5 1406 aa23.94■■□□□ 1.42
DDR1-250ENST00000503628 MARF1Q9Y4F3 1742 aaKnown RBP23.94■■□□□ 1.42
DDR1-250ENST00000503628 GJD4Q96KN9 370 aaPredicted RBP23.94■■□□□ 1.42
DDR1-250ENST00000503628 FOXO3O43524 673 aa23.93■■□□□ 1.42
DDR1-250ENST00000503628 XPCQ01831 940 aaPredicted RBP23.93■■□□□ 1.42
DDR1-250ENST00000503628 PXDNQ92626 1479 aa23.92■■□□□ 1.42
DDR1-250ENST00000503628 RPGRIP1LQ68CZ1 1315 aa23.91■■□□□ 1.42
DDR1-250ENST00000503628 CDC42BPGQ6DT37 1551 aa23.87■■□□□ 1.41
DDR1-250ENST00000503628 NUTM2FA1L443 756 aa23.87■■□□□ 1.41
DDR1-250ENST00000503628 PPLO60437 1756 aa23.87■■□□□ 1.41
DDR1-250ENST00000503628 NAIPQ13075 1403 aa23.84■■□□□ 1.41
DDR1-250ENST00000503628 LRPPRCP42704 1394 aaKnown RBP23.84■■□□□ 1.41
DDR1-250ENST00000503628 UNC5CLQ8IV45 518 aa23.84■■□□□ 1.41
DDR1-250ENST00000503628 WAPLQ7Z5K2 1190 aa23.83■■□□□ 1.41
DDR1-250ENST00000503628 STK26Q9P289 416 aa23.83■■□□□ 1.41
DDR1-250ENST00000503628 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.83■■□□□ 1.41
DDR1-250ENST00000503628 RALGAPBQ86X10 1494 aa23.82■■□□□ 1.4
DDR1-250ENST00000503628 GLI3P10071 1580 aa23.82■■□□□ 1.4
DDR1-250ENST00000503628 BLMP54132 1417 aaPredicted RBP23.81■■□□□ 1.4
DDR1-250ENST00000503628 SLIT2O94813 1529 aa23.8■■□□□ 1.4
DDR1-250ENST00000503628 BRWD3Q6RI45 1802 aa23.8■■□□□ 1.4
DDR1-250ENST00000503628 DEFB132Q7Z7B7 95 aa23.8■■□□□ 1.4
DDR1-250ENST00000503628 SLC4A1APQ9BWU0 796 aaKnown RBP23.8■■□□□ 1.4
DDR1-250ENST00000503628 SPATA31A3Q5VYP0 1347 aa23.79■■□□□ 1.4
DDR1-250ENST00000503628 ADGRF5Q8IZF2 1346 aa23.79■■□□□ 1.4
DDR1-250ENST00000503628 KRT28Q7Z3Y7 464 aa23.75■■□□□ 1.39
DDR1-250ENST00000503628 SEPT12Q8IYM1 358 aa23.75■■□□□ 1.39
DDR1-250ENST00000503628 PLEKHH1Q9ULM0 1364 aa23.75■■□□□ 1.39
DDR1-250ENST00000503628 TECPR2O15040 1411 aa23.75■■□□□ 1.39
DDR1-250ENST00000503628 SF3B2Q13435 895 aaKnown RBP23.74■■□□□ 1.39
DDR1-250ENST00000503628 TMEM132EQ6IEE7 984 aa23.74■■□□□ 1.39
DDR1-250ENST00000503628 RGL3Q3MIN7 710 aa23.73■■□□□ 1.39
DDR1-250ENST00000503628 RRBP1Q9P2E9 1410 aaKnown RBP23.73■■□□□ 1.39
DDR1-250ENST00000503628 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
DDR1-250ENST00000503628 FMN2Q9NZ56 1722 aa23.73■■□□□ 1.39
DDR1-250ENST00000503628 ABCC11Q96J66 1382 aa23.72■■□□□ 1.39
DDR1-250ENST00000503628 CCDC144AA2RUR9 1427 aa23.71■■□□□ 1.39
DDR1-250ENST00000503628 PLEKHG5O94827 1062 aa23.71■■□□□ 1.39
DDR1-250ENST00000503628 HAP1P54257 671 aaPredicted RBP23.71■■□□□ 1.39
DDR1-250ENST00000503628 VPS72Q15906 364 aa23.71■■□□□ 1.39
DDR1-250ENST00000503628 CABLES1Q8TDN4 633 aa23.71■■□□□ 1.39
DDR1-250ENST00000503628 KIF1AQ12756 1690 aa23.7■■□□□ 1.39
DDR1-250ENST00000503628 RGPD8O14715 1765 aaPredicted RBP23.68■■□□□ 1.38
DDR1-250ENST00000503628 KNDC1Q76NI1 1749 aa23.68■■□□□ 1.38
DDR1-250ENST00000503628 ONECUT3O60422 494 aaPredicted RBP23.68■■□□□ 1.38
DDR1-250ENST00000503628 CCDC9Q9Y3X0 531 aaKnown RBP23.68■■□□□ 1.38
DDR1-250ENST00000503628 KRT27Q7Z3Y8 459 aa23.67■■□□□ 1.38
DDR1-250ENST00000503628 PSME1Q06323 249 aa23.66■■□□□ 1.38
DDR1-250ENST00000503628 PHF8Q9UPP1 1060 aa23.66■■□□□ 1.38
DDR1-250ENST00000503628 PLCH1Q4KWH8 1693 aa23.66■■□□□ 1.38
DDR1-250ENST00000503628 ANKRD30BQ9BXX2 1392 aa23.65■■□□□ 1.38
DDR1-250ENST00000503628 IFT172Q9UG01 1749 aa23.65■■□□□ 1.38
DDR1-250ENST00000503628 TNS3Q68CZ2 1445 aa23.65■■□□□ 1.38
DDR1-250ENST00000503628 NWD2Q9ULI1 1742 aa23.64■■□□□ 1.38
DDR1-250ENST00000503628 LRP5O75197 1615 aa23.64■■□□□ 1.38
DDR1-250ENST00000503628 SPATA31E1Q6ZUB1 1445 aa23.64■■□□□ 1.37
DDR1-250ENST00000503628 YTHDC2Q9H6S0 1430 aaKnown RBP23.64■■□□□ 1.37
DDR1-250ENST00000503628 LMOD2Q6P5Q4 547 aa23.63■■□□□ 1.37
DDR1-250ENST00000503628 PSDA5PKW4 1024 aaPredicted RBP23.62■■□□□ 1.37
DDR1-250ENST00000503628 FAM83GA6ND36 823 aa23.62■■□□□ 1.37
DDR1-250ENST00000503628 PIK3C2GO75747 1445 aa23.61■■□□□ 1.37
DDR1-250ENST00000503628 SIRT1Q96EB6 747 aa23.61■■□□□ 1.37
DDR1-250ENST00000503628 A0A0G2JS52 829 aa23.6■■□□□ 1.37
DDR1-250ENST00000503628 MYT1Q01538 1121 aa23.6■■□□□ 1.37
DDR1-250ENST00000503628 SBNO1A3KN83 1393 aa23.6■■□□□ 1.37
DDR1-250ENST00000503628 ABCA3Q99758 1704 aa23.59■■□□□ 1.37
DDR1-250ENST00000503628 BAG6P46379 1132 aa23.59■■□□□ 1.37
DDR1-250ENST00000503628 HRCP23327 699 aa23.58■■□□□ 1.37
DDR1-250ENST00000503628 NRXN1Q9ULB1 1477 aa23.57■■□□□ 1.36
DDR1-250ENST00000503628 ARHGEF10O15013 1369 aa23.57■■□□□ 1.36
DDR1-250ENST00000503628 FAM98CQ17RN3 349 aaKnown RBP23.57■■□□□ 1.36
DDR1-250ENST00000503628 C14orf93Q9H972 538 aaKnown RBP23.56■■□□□ 1.36
DDR1-250ENST00000503628 SAFB2Q14151 953 aaKnown RBP eCLIP23.55■■□□□ 1.36
DDR1-250ENST00000503628 PMFBP1Q8TBY8 1022 aa23.55■■□□□ 1.36
DDR1-250ENST00000503628 MPHOSPH9Q99550 1183 aa23.54■■□□□ 1.36
DDR1-250ENST00000503628 EN1Q05925 392 aaPredicted RBP23.53■■□□□ 1.36
DDR1-250ENST00000503628 BTG4Q9NY30 223 aa23.53■■□□□ 1.36
DDR1-250ENST00000503628 DHX57Q6P158 1386 aaKnown RBP23.52■■□□□ 1.36
DDR1-250ENST00000503628 CFAP70Q5T0N1 1121 aa23.52■■□□□ 1.36
DDR1-250ENST00000503628 PRAM1Q96QH2 718 aa23.52■■□□□ 1.36
DDR1-250ENST00000503628 NRAPQ86VF7 1730 aa23.52■■□□□ 1.36
DDR1-250ENST00000503628 FAM182BQ5T319 152 aa23.51■■□□□ 1.35
DDR1-250ENST00000503628 R3HDM1Q15032 1099 aaKnown RBP23.47■■□□□ 1.35
DDR1-250ENST00000503628 POGKQ9P215 609 aa23.47■■□□□ 1.35
DDR1-250ENST00000503628 RGPD1P0DJD0 1748 aa23.47■■□□□ 1.35
DDR1-250ENST00000503628 TRPM3Q9HCF6 1732 aaPredicted RBP23.46■■□□□ 1.35
DDR1-250ENST00000503628 COL14A1Q05707 1796 aaKnown RBP23.45■■□□□ 1.34
DDR1-250ENST00000503628 ANKARQ7Z5J8 1434 aa23.45■■□□□ 1.34
DDR1-250ENST00000503628 SPATA31A5Q5VU36 1347 aa23.44■■□□□ 1.34
DDR1-250ENST00000503628 SPATA31A7Q8IWB4 1347 aa23.44■■□□□ 1.34
DDR1-250ENST00000503628 ALS2Q96Q42 1657 aa23.43■■□□□ 1.34
DDR1-250ENST00000503628 HIRIP3Q9BW71 556 aaPredicted RBP23.42■■□□□ 1.34
DDR1-250ENST00000503628 GPRASP1Q5JY77 1395 aa23.41■■□□□ 1.34
DDR1-250ENST00000503628 EZH2Q15910 746 aaKnown RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms