RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CDC42BPGQ6DT37 1551 aa28.62■■■□□ 2.17
UBE2D3-215ENST00000503418 WAPLQ7Z5K2 1190 aa28.61■■■□□ 2.17
UBE2D3-215ENST00000503418 ABCC11Q96J66 1382 aa28.6■■■□□ 2.17
UBE2D3-215ENST00000503418 YTHDC2Q9H6S0 1430 aaKnown RBP28.6■■■□□ 2.17
UBE2D3-215ENST00000503418 LAMC1P11047 1609 aa28.59■■■□□ 2.17
UBE2D3-215ENST00000503418 NRXN1Q9ULB1 1477 aa28.59■■■□□ 2.17
UBE2D3-215ENST00000503418 C14orf93Q9H972 538 aaKnown RBP28.57■■■□□ 2.16
UBE2D3-215ENST00000503418 PLEKHH1Q9ULM0 1364 aa28.57■■■□□ 2.16
UBE2D3-215ENST00000503418 HRCP23327 699 aa28.56■■■□□ 2.16
UBE2D3-215ENST00000503418 CFAP70Q5T0N1 1121 aa28.56■■■□□ 2.16
UBE2D3-215ENST00000503418 PNPLA6Q8IY17 1366 aa28.55■■■□□ 2.16
UBE2D3-215ENST00000503418 ESCO1Q5FWF5 840 aa28.53■■■□□ 2.16
UBE2D3-215ENST00000503418 DHX57Q6P158 1386 aaKnown RBP28.52■■■□□ 2.16
UBE2D3-215ENST00000503418 NUTM2FA1L443 756 aa28.52■■■□□ 2.16
UBE2D3-215ENST00000503418 ZNF772Q68DY9 489 aaPredicted RBP28.52■■■□□ 2.16
UBE2D3-215ENST00000503418 SOS2Q07890 1332 aaPredicted RBP28.5■■■□□ 2.15
UBE2D3-215ENST00000503418 KDM2AQ9Y2K7 1162 aa28.49■■■□□ 2.15
UBE2D3-215ENST00000503418 FMN2Q9NZ56 1722 aa28.48■■■□□ 2.15
UBE2D3-215ENST00000503418 NPHP3Q7Z494 1330 aa28.46■■■□□ 2.15
UBE2D3-215ENST00000503418 DCAF11Q8TEB1 546 aa28.46■■■□□ 2.15
UBE2D3-215ENST00000503418 SIRT1Q96EB6 747 aa28.46■■■□□ 2.15
UBE2D3-215ENST00000503418 C8orf37Q96NL8 207 aa28.45■■■□□ 2.14
UBE2D3-215ENST00000503418 AFF2P51816 1311 aa28.44■■■□□ 2.14
UBE2D3-215ENST00000503418 SAFB2Q14151 953 aaKnown RBP eCLIP28.44■■■□□ 2.14
UBE2D3-215ENST00000503418 FOXO3O43524 673 aa28.43■■■□□ 2.14
UBE2D3-215ENST00000503418 PRAM1Q96QH2 718 aa28.43■■■□□ 2.14
UBE2D3-215ENST00000503418 XPCQ01831 940 aaPredicted RBP28.42■■■□□ 2.14
UBE2D3-215ENST00000503418 PXDNQ92626 1479 aa28.41■■■□□ 2.14
UBE2D3-215ENST00000503418 ADAMTS2O95450 1211 aa28.41■■■□□ 2.14
UBE2D3-215ENST00000503418 ADGRB1O14514 1584 aa28.41■■■□□ 2.14
UBE2D3-215ENST00000503418 DLC1Q96QB1 1528 aa28.4■■■□□ 2.14
UBE2D3-215ENST00000503418 POGKQ9P215 609 aa28.4■■■□□ 2.14
UBE2D3-215ENST00000503418 RGPD8O14715 1765 aaPredicted RBP28.39■■■□□ 2.14
UBE2D3-215ENST00000503418 KIF1AQ12756 1690 aa28.39■■■□□ 2.14
UBE2D3-215ENST00000503418 COL22A1Q8NFW1 1626 aaPredicted RBP28.38■■■□□ 2.13
UBE2D3-215ENST00000503418 RXRBP28702 533 aa28.37■■■□□ 2.13
UBE2D3-215ENST00000503418 TRAK1Q9UPV9 953 aa28.37■■■□□ 2.13
UBE2D3-215ENST00000503418 STAC3Q96MF2 364 aa28.36■■■□□ 2.13
UBE2D3-215ENST00000503418 NGLY1Q96IV0 654 aa28.35■■■□□ 2.13
UBE2D3-215ENST00000503418 ADGRB2O60241 1585 aa28.3■■■□□ 2.12
UBE2D3-215ENST00000503418 QTRT2Q9H974 415 aaKnown RBP28.3■■■□□ 2.12
UBE2D3-215ENST00000503418 PHF8Q9UPP1 1060 aa28.3■■■□□ 2.12
UBE2D3-215ENST00000503418 HIRIP3Q9BW71 556 aaPredicted RBP28.29■■■□□ 2.12
UBE2D3-215ENST00000503418 KRT28Q7Z3Y7 464 aa28.28■■■□□ 2.12
UBE2D3-215ENST00000503418 MINK1Q8N4C8 1332 aaPredicted RBP28.27■■■□□ 2.12
UBE2D3-215ENST00000503418 MARF1Q9Y4F3 1742 aaKnown RBP28.26■■■□□ 2.12
UBE2D3-215ENST00000503418 USP32Q8NFA0 1604 aa28.26■■■□□ 2.11
UBE2D3-215ENST00000503418 CDK12Q9NYV4 1490 aaPredicted RBP28.26■■■□□ 2.11
UBE2D3-215ENST00000503418 SPATA31A3Q5VYP0 1347 aa28.25■■■□□ 2.11
UBE2D3-215ENST00000503418 USP21Q9UK80 565 aa28.25■■■□□ 2.11
UBE2D3-215ENST00000503418 ARHGEF28Q8N1W1 1705 aaKnown RBP28.25■■■□□ 2.11
UBE2D3-215ENST00000503418 ANKARQ7Z5J8 1434 aa28.25■■■□□ 2.11
UBE2D3-215ENST00000503418 RBM6P78332 1123 aaKnown RBP28.23■■■□□ 2.11
UBE2D3-215ENST00000503418 PSME1Q06323 249 aa28.22■■■□□ 2.11
UBE2D3-215ENST00000503418 PMFBP1Q8TBY8 1022 aa28.22■■■□□ 2.11
UBE2D3-215ENST00000503418 RGS12O14924 1447 aa28.2■■■□□ 2.11
UBE2D3-215ENST00000503418 TNS3Q68CZ2 1445 aa28.2■■■□□ 2.11
UBE2D3-215ENST00000503418 FNBP4Q8N3X1 1017 aaPredicted RBP28.2■■■□□ 2.1
UBE2D3-215ENST00000503418 KIAA1210Q9ULL0 1709 aa28.19■■■□□ 2.1
UBE2D3-215ENST00000503418 EIF3AQ14152 1382 aaKnown RBP28.19■■■□□ 2.1
UBE2D3-215ENST00000503418 TULP4Q9NRJ4 1543 aa28.18■■■□□ 2.1
UBE2D3-215ENST00000503418 TRPC5Q9UL62 973 aaPredicted RBP28.18■■■□□ 2.1
UBE2D3-215ENST00000503418 WASLO00401 505 aaPredicted RBP28.17■■■□□ 2.1
UBE2D3-215ENST00000503418 LMOD2Q6P5Q4 547 aa28.17■■■□□ 2.1
UBE2D3-215ENST00000503418 PLEKHG5O94827 1062 aa28.16■■■□□ 2.1
UBE2D3-215ENST00000503418 HAP1P54257 671 aaPredicted RBP28.16■■■□□ 2.1
UBE2D3-215ENST00000503418 PRR36Q9H6K5 1346 aa28.16■■■□□ 2.1
UBE2D3-215ENST00000503418 SBNO1A3KN83 1393 aa28.15■■■□□ 2.1
UBE2D3-215ENST00000503418 UPF1Q92900 1129 aaKnown RBP eCLIP28.14■■■□□ 2.1
UBE2D3-215ENST00000503418 ATRNO75882 1429 aa28.14■■■□□ 2.1
UBE2D3-215ENST00000503418 BCL9LQ86UU0 1499 aa28.12■■■□□ 2.09
UBE2D3-215ENST00000503418 ARHGEF10O15013 1369 aa28.11■■■□□ 2.09
UBE2D3-215ENST00000503418 CABLES1Q8TDN4 633 aa28.11■■■□□ 2.09
UBE2D3-215ENST00000503418 ITSN1Q15811 1721 aa28.1■■■□□ 2.09
UBE2D3-215ENST00000503418 ABCA3Q99758 1704 aa28.1■■■□□ 2.09
UBE2D3-215ENST00000503418 NBPF1Q3BBV0 1214 aa28.1■■■□□ 2.09
UBE2D3-215ENST00000503418 GPRASP1Q5JY77 1395 aa28.1■■■□□ 2.09
UBE2D3-215ENST00000503418 TRPM3Q9HCF6 1732 aaPredicted RBP28.09■■■□□ 2.09
UBE2D3-215ENST00000503418 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.08■■■□□ 2.09
UBE2D3-215ENST00000503418 NGDNQ8NEJ9 315 aaKnown RBP28.07■■■□□ 2.08
UBE2D3-215ENST00000503418 ATP7BP35670 1465 aa28.07■■■□□ 2.08
UBE2D3-215ENST00000503418 SIN3AQ96ST3 1273 aa28.06■■■□□ 2.08
UBE2D3-215ENST00000503418 SLIT2O94813 1529 aa28.05■■■□□ 2.08
UBE2D3-215ENST00000503418 L3MBTL2Q969R5 705 aa28.05■■■□□ 2.08
UBE2D3-215ENST00000503418 ALS2Q96Q42 1657 aa28.04■■■□□ 2.08
UBE2D3-215ENST00000503418 NUDT16Q96DE0 195 aaKnown RBP28.04■■■□□ 2.08
UBE2D3-215ENST00000503418 CDK19Q9BWU1 502 aa28.04■■■□□ 2.08
UBE2D3-215ENST00000503418 NEUROD1Q13562 356 aa28.03■■■□□ 2.08
UBE2D3-215ENST00000503418 UNC5CLQ8IV45 518 aa28.03■■■□□ 2.08
UBE2D3-215ENST00000503418 GJD4Q96KN9 370 aaPredicted RBP28.02■■■□□ 2.08
UBE2D3-215ENST00000503418 PLCH1Q4KWH8 1693 aa28.02■■■□□ 2.08
UBE2D3-215ENST00000503418 PAK3O75914 559 aaPredicted RBP28.01■■■□□ 2.07
UBE2D3-215ENST00000503418 TOPAZ1Q8N9V7 1692 aa27.98■■■□□ 2.07
UBE2D3-215ENST00000503418 NWD2Q9ULI1 1742 aa27.98■■■□□ 2.07
UBE2D3-215ENST00000503418 ATAD2Q6PL18 1390 aa27.98■■■□□ 2.07
UBE2D3-215ENST00000503418 CENPJQ9HC77 1338 aaPredicted RBP27.97■■■□□ 2.07
UBE2D3-215ENST00000503418 RALGAPBQ86X10 1494 aa27.97■■■□□ 2.07
UBE2D3-215ENST00000503418 QRICH2Q9H0J4 1663 aa27.97■■■□□ 2.07
UBE2D3-215ENST00000503418 GLI3P10071 1580 aa27.96■■■□□ 2.07
UBE2D3-215ENST00000503418 TRPM1Q7Z4N2 1603 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms