RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 METP08581 1390 aa11.98□□□□□ -0.49
PDE4D-210ENST00000503258 TRPM3Q9HCF6 1732 aaPredicted RBP11.98□□□□□ -0.49
PDE4D-210ENST00000503258 AFF2P51816 1311 aa11.98□□□□□ -0.49
PDE4D-210ENST00000503258 GLI3P10071 1580 aa11.97□□□□□ -0.49
PDE4D-210ENST00000503258 ANKARQ7Z5J8 1434 aa11.97□□□□□ -0.49
PDE4D-210ENST00000503258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.97□□□□□ -0.49
PDE4D-210ENST00000503258 COL14A1Q05707 1796 aaKnown RBP11.96□□□□□ -0.49
PDE4D-210ENST00000503258 MEX3CQ5U5Q3 659 aaKnown RBP11.96□□□□□ -0.49
PDE4D-210ENST00000503258 EHMT2Q96KQ7 1210 aa11.96□□□□□ -0.49
PDE4D-210ENST00000503258 ALS2Q96Q42 1657 aa11.96□□□□□ -0.49
PDE4D-210ENST00000503258 SBNO1A3KN83 1393 aa11.96□□□□□ -0.5
PDE4D-210ENST00000503258 NUP155O75694 1391 aa11.96□□□□□ -0.5
PDE4D-210ENST00000503258 ABCC11Q96J66 1382 aa11.96□□□□□ -0.5
PDE4D-210ENST00000503258 THSD7AQ9UPZ6 1657 aa11.96□□□□□ -0.5
PDE4D-210ENST00000503258 TRPC5Q9UL62 973 aaPredicted RBP11.96□□□□□ -0.5
PDE4D-210ENST00000503258 BCL9LQ86UU0 1499 aa11.95□□□□□ -0.5
PDE4D-210ENST00000503258 NAIPQ13075 1403 aa11.95□□□□□ -0.5
PDE4D-210ENST00000503258 ANKRD30BQ9BXX2 1392 aa11.95□□□□□ -0.5
PDE4D-210ENST00000503258 CCDC144AA2RUR9 1427 aa11.94□□□□□ -0.5
PDE4D-210ENST00000503258 BLMP54132 1417 aaPredicted RBP11.94□□□□□ -0.5
PDE4D-210ENST00000503258 SPATA31E1Q6ZUB1 1445 aa11.94□□□□□ -0.5
PDE4D-210ENST00000503258 VGFO15240 615 aaPredicted RBP11.93□□□□□ -0.5
PDE4D-210ENST00000503258 ITSN1Q15811 1721 aa11.93□□□□□ -0.5
PDE4D-210ENST00000503258 RREB1Q92766 1687 aa11.93□□□□□ -0.5
PDE4D-210ENST00000503258 BRWD3Q6RI45 1802 aa11.93□□□□□ -0.5
PDE4D-210ENST00000503258 TNS1Q9HBL0 1735 aaKnown RBP11.92□□□□□ -0.5
PDE4D-210ENST00000503258 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
PDE4D-210ENST00000503258 PIK3C2GO75747 1445 aa11.92□□□□□ -0.5
PDE4D-210ENST00000503258 NPHP3Q7Z494 1330 aa11.91□□□□□ -0.5
PDE4D-210ENST00000503258 EIF3AQ14152 1382 aaKnown RBP11.91□□□□□ -0.5
PDE4D-210ENST00000503258 ROBO2Q9HCK4 1378 aa11.91□□□□□ -0.5
PDE4D-210ENST00000503258 KIAA1210Q9ULL0 1709 aa11.9□□□□□ -0.5
PDE4D-210ENST00000503258 RALGAPBQ86X10 1494 aa11.9□□□□□ -0.51
PDE4D-210ENST00000503258 QTRT2Q9H974 415 aaKnown RBP11.89□□□□□ -0.51
PDE4D-210ENST00000503258 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
PDE4D-210ENST00000503258 TNS3Q68CZ2 1445 aa11.87□□□□□ -0.51
PDE4D-210ENST00000503258 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
PDE4D-210ENST00000503258 STAC3Q96MF2 364 aa11.87□□□□□ -0.51
PDE4D-210ENST00000503258 ARHGEF10O15013 1369 aa11.86□□□□□ -0.51
PDE4D-210ENST00000503258 CHIC2Q9UKJ5 165 aa11.85□□□□□ -0.51
PDE4D-210ENST00000503258 BCANQ96GW7 911 aa11.85□□□□□ -0.51
PDE4D-210ENST00000503258 BRD4O60885 1362 aaPredicted RBP11.84□□□□□ -0.51
PDE4D-210ENST00000503258 ATP7BP35670 1465 aa11.84□□□□□ -0.51
PDE4D-210ENST00000503258 PHRF1Q9P1Y6 1649 aaKnown RBP11.84□□□□□ -0.51
PDE4D-210ENST00000503258 C14orf37Q86TY3 774 aa11.84□□□□□ -0.51
PDE4D-210ENST00000503258 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
PDE4D-210ENST00000503258 VPS72Q15906 364 aa11.83□□□□□ -0.52
PDE4D-210ENST00000503258 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
PDE4D-210ENST00000503258 ABCC6O95255 1503 aa11.83□□□□□ -0.52
PDE4D-210ENST00000503258 USP21Q9UK80 565 aa11.83□□□□□ -0.52
PDE4D-210ENST00000503258 ADGRB1O14514 1584 aa11.83□□□□□ -0.52
PDE4D-210ENST00000503258 TULP4Q9NRJ4 1543 aa11.82□□□□□ -0.52
PDE4D-210ENST00000503258 WNK3Q9BYP7 1800 aa11.82□□□□□ -0.52
PDE4D-210ENST00000503258 PARP4Q9UKK3 1724 aaKnown RBP11.81□□□□□ -0.52
PDE4D-210ENST00000503258 YTHDC2Q9H6S0 1430 aaKnown RBP11.81□□□□□ -0.52
PDE4D-210ENST00000503258 C11orf95C9JLR9 678 aaPredicted RBP11.81□□□□□ -0.52
PDE4D-210ENST00000503258 GJD4Q96KN9 370 aaPredicted RBP11.81□□□□□ -0.52
PDE4D-210ENST00000503258 USP54Q70EL1 1684 aa11.81□□□□□ -0.52
PDE4D-210ENST00000503258 UNC5CLQ8IV45 518 aa11.81□□□□□ -0.52
PDE4D-210ENST00000503258 TRIM52Q96A61 297 aa11.81□□□□□ -0.52
PDE4D-210ENST00000503258 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
PDE4D-210ENST00000503258 NUP188Q5SRE5 1749 aa11.79□□□□□ -0.52
PDE4D-210ENST00000503258 LMO7Q8WWI1 1683 aa11.79□□□□□ -0.52
PDE4D-210ENST00000503258 RGPD8O14715 1765 aaPredicted RBP11.79□□□□□ -0.52
PDE4D-210ENST00000503258 COL24A1Q17RW2 1714 aa11.78□□□□□ -0.52
PDE4D-210ENST00000503258 PSME1Q06323 249 aa11.77□□□□□ -0.52
PDE4D-210ENST00000503258 BCL9O00512 1426 aa11.77□□□□□ -0.52
PDE4D-210ENST00000503258 C8orf37Q96NL8 207 aa11.77□□□□□ -0.53
PDE4D-210ENST00000503258 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.53
PDE4D-210ENST00000503258 PEAK1Q9H792 1746 aa11.77□□□□□ -0.53
PDE4D-210ENST00000503258 RBM33Q96EV2 1170 aaKnown RBP11.76□□□□□ -0.53
PDE4D-210ENST00000503258 QSER1Q2KHR3 1735 aa11.75□□□□□ -0.53
PDE4D-210ENST00000503258 C14orf93Q9H972 538 aaKnown RBP11.75□□□□□ -0.53
PDE4D-210ENST00000503258 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
PDE4D-210ENST00000503258 LOC105371045A0A1W2PR82 267 aa11.74□□□□□ -0.53
PDE4D-210ENST00000503258 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
PDE4D-210ENST00000503258 CASZ1Q86V15 1759 aa11.74□□□□□ -0.53
PDE4D-210ENST00000503258 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
PDE4D-210ENST00000503258 NRKQ7Z2Y5 1582 aa11.73□□□□□ -0.53
PDE4D-210ENST00000503258 DHX57Q6P158 1386 aaKnown RBP11.73□□□□□ -0.53
PDE4D-210ENST00000503258 NUTM2BA6NNL0 878 aaPredicted RBP11.73□□□□□ -0.53
PDE4D-210ENST00000503258 NUTM2EB1AL46 878 aaPredicted RBP11.73□□□□□ -0.53
PDE4D-210ENST00000503258 NUTM2AQ8IVF1 878 aaPredicted RBP11.73□□□□□ -0.53
PDE4D-210ENST00000503258 HRCP23327 699 aa11.71□□□□□ -0.53
PDE4D-210ENST00000503258 ORAI2Q96SN7 254 aa11.71□□□□□ -0.53
PDE4D-210ENST00000503258 CPDO75976 1380 aa11.7□□□□□ -0.54
PDE4D-210ENST00000503258 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
PDE4D-210ENST00000503258 SLIT3O75094 1523 aa11.69□□□□□ -0.54
PDE4D-210ENST00000503258 POLR3AO14802 1390 aaPredicted RBP11.69□□□□□ -0.54
PDE4D-210ENST00000503258 QRICH2Q9H0J4 1663 aa11.67□□□□□ -0.54
PDE4D-210ENST00000503258 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
PDE4D-210ENST00000503258 SPATA31A5Q5VU36 1347 aa11.66□□□□□ -0.54
PDE4D-210ENST00000503258 SPATA31A7Q8IWB4 1347 aa11.66□□□□□ -0.54
PDE4D-210ENST00000503258 AATKQ6ZMQ8 1374 aa11.66□□□□□ -0.54
PDE4D-210ENST00000503258 CAMTA1Q9Y6Y1 1673 aa11.66□□□□□ -0.54
PDE4D-210ENST00000503258 BARGINQ6ZT62 677 aa11.66□□□□□ -0.54
PDE4D-210ENST00000503258 KRT28Q7Z3Y7 464 aa11.66□□□□□ -0.54
PDE4D-210ENST00000503258 NINLQ9Y2I6 1382 aa11.66□□□□□ -0.54
PDE4D-210ENST00000503258 PHF8Q9UPP1 1060 aa11.65□□□□□ -0.54
PDE4D-210ENST00000503258 COL18A1P39060 1754 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms