RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 PRAG1Q86YV5 1406 aa27.56■■■□□ 2
HERC6-204ENST00000502870 ROBO2Q9HCK4 1378 aa27.55■■■□□ 2
HERC6-204ENST00000502870 HFM1A2PYH4 1435 aa27.55■■■□□ 2
HERC6-204ENST00000502870 VGFO15240 615 aaPredicted RBP27.54■■■□□ 2
HERC6-204ENST00000502870 BCL9LQ86UU0 1499 aa27.53■■■□□ 2
HERC6-204ENST00000502870 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.53■■■□□ 2
HERC6-204ENST00000502870 ITGAEP38570 1179 aa27.51■■□□□ 1.99
HERC6-204ENST00000502870 GJD4Q96KN9 370 aaPredicted RBP27.51■■□□□ 1.99
HERC6-204ENST00000502870 CDC42BPGQ6DT37 1551 aa27.5■■□□□ 1.99
HERC6-204ENST00000502870 BLMP54132 1417 aaPredicted RBP27.5■■□□□ 1.99
HERC6-204ENST00000502870 ESCO1Q5FWF5 840 aa27.48■■□□□ 1.99
HERC6-204ENST00000502870 PXDNQ92626 1479 aa27.48■■□□□ 1.99
HERC6-204ENST00000502870 LRPPRCP42704 1394 aaKnown RBP27.48■■□□□ 1.99
HERC6-204ENST00000502870 RPGRIP1LQ68CZ1 1315 aa27.43■■□□□ 1.98
HERC6-204ENST00000502870 SF3B2Q13435 895 aaKnown RBP27.43■■□□□ 1.98
HERC6-204ENST00000502870 UNC5CLQ8IV45 518 aa27.41■■□□□ 1.98
HERC6-204ENST00000502870 PPLO60437 1756 aa27.4■■□□□ 1.98
HERC6-204ENST00000502870 RALGAPBQ86X10 1494 aa27.4■■□□□ 1.98
HERC6-204ENST00000502870 FOXO3O43524 673 aa27.4■■□□□ 1.98
HERC6-204ENST00000502870 LRP5O75197 1615 aa27.4■■□□□ 1.98
HERC6-204ENST00000502870 GLI3P10071 1580 aa27.39■■□□□ 1.98
HERC6-204ENST00000502870 BRWD3Q6RI45 1802 aa27.39■■□□□ 1.97
HERC6-204ENST00000502870 SLIT2O94813 1529 aa27.37■■□□□ 1.97
HERC6-204ENST00000502870 XPCQ01831 940 aaPredicted RBP27.37■■□□□ 1.97
HERC6-204ENST00000502870 USP32Q8NFA0 1604 aa27.34■■□□□ 1.97
HERC6-204ENST00000502870 NAIPQ13075 1403 aa27.34■■□□□ 1.97
HERC6-204ENST00000502870 KIF1AQ12756 1690 aa27.34■■□□□ 1.97
HERC6-204ENST00000502870 DEFB132Q7Z7B7 95 aa27.32■■□□□ 1.96
HERC6-204ENST00000502870 CCDC144AA2RUR9 1427 aa27.32■■□□□ 1.96
HERC6-204ENST00000502870 SPATA31A3Q5VYP0 1347 aa27.3■■□□□ 1.96
HERC6-204ENST00000502870 HAP1P54257 671 aaPredicted RBP27.29■■□□□ 1.96
HERC6-204ENST00000502870 NWD2Q9ULI1 1742 aa27.28■■□□□ 1.96
HERC6-204ENST00000502870 SEPT12Q8IYM1 358 aa27.28■■□□□ 1.96
HERC6-204ENST00000502870 FMN2Q9NZ56 1722 aa27.27■■□□□ 1.96
HERC6-204ENST00000502870 TECPR2O15040 1411 aa27.27■■□□□ 1.96
HERC6-204ENST00000502870 NUTM2FA1L443 756 aa27.26■■□□□ 1.95
HERC6-204ENST00000502870 KNDC1Q76NI1 1749 aa27.25■■□□□ 1.95
HERC6-204ENST00000502870 PLCH1Q4KWH8 1693 aa27.25■■□□□ 1.95
HERC6-204ENST00000502870 VPS72Q15906 364 aa27.25■■□□□ 1.95
HERC6-204ENST00000502870 KRT27Q7Z3Y8 459 aa27.23■■□□□ 1.95
HERC6-204ENST00000502870 CCDC9Q9Y3X0 531 aaKnown RBP27.23■■□□□ 1.95
HERC6-204ENST00000502870 BAG6P46379 1132 aa27.22■■□□□ 1.95
HERC6-204ENST00000502870 STK26Q9P289 416 aa27.22■■□□□ 1.95
HERC6-204ENST00000502870 ONECUT3O60422 494 aaPredicted RBP27.21■■□□□ 1.95
HERC6-204ENST00000502870 KRT28Q7Z3Y7 464 aa27.21■■□□□ 1.95
HERC6-204ENST00000502870 TNS3Q68CZ2 1445 aa27.21■■□□□ 1.95
HERC6-204ENST00000502870 RRBP1Q9P2E9 1410 aaKnown RBP27.21■■□□□ 1.95
HERC6-204ENST00000502870 PSME1Q06323 249 aa27.2■■□□□ 1.94
HERC6-204ENST00000502870 WAPLQ7Z5K2 1190 aa27.2■■□□□ 1.94
HERC6-204ENST00000502870 ABCC11Q96J66 1382 aa27.19■■□□□ 1.94
HERC6-204ENST00000502870 SLC4A1APQ9BWU0 796 aaKnown RBP27.18■■□□□ 1.94
HERC6-204ENST00000502870 IFT172Q9UG01 1749 aa27.17■■□□□ 1.94
HERC6-204ENST00000502870 ABCA3Q99758 1704 aa27.16■■□□□ 1.94
HERC6-204ENST00000502870 A0A0G2JS52 829 aa27.16■■□□□ 1.94
HERC6-204ENST00000502870 MYT1Q01538 1121 aa27.16■■□□□ 1.94
HERC6-204ENST00000502870 ARHGEF10O15013 1369 aa27.15■■□□□ 1.94
HERC6-204ENST00000502870 ANKRD30BQ9BXX2 1392 aa27.15■■□□□ 1.94
HERC6-204ENST00000502870 PSDA5PKW4 1024 aaPredicted RBP27.15■■□□□ 1.94
HERC6-204ENST00000502870 ADGRF5Q8IZF2 1346 aa27.15■■□□□ 1.94
HERC6-204ENST00000502870 HRCP23327 699 aa27.14■■□□□ 1.94
HERC6-204ENST00000502870 RGPD8O14715 1765 aaPredicted RBP27.14■■□□□ 1.93
HERC6-204ENST00000502870 RGPD1P0DJD0 1748 aa27.13■■□□□ 1.93
HERC6-204ENST00000502870 PLEKHH1Q9ULM0 1364 aa27.13■■□□□ 1.93
HERC6-204ENST00000502870 PHF8Q9UPP1 1060 aa27.13■■□□□ 1.93
HERC6-204ENST00000502870 SBNO1A3KN83 1393 aa27.12■■□□□ 1.93
HERC6-204ENST00000502870 CABLES1Q8TDN4 633 aa27.11■■□□□ 1.93
HERC6-204ENST00000502870 LMOD2Q6P5Q4 547 aa27.1■■□□□ 1.93
HERC6-204ENST00000502870 YTHDC2Q9H6S0 1430 aaKnown RBP27.09■■□□□ 1.93
HERC6-204ENST00000502870 NRXN1Q9ULB1 1477 aa27.08■■□□□ 1.93
HERC6-204ENST00000502870 TMEM132EQ6IEE7 984 aa27.08■■□□□ 1.93
HERC6-204ENST00000502870 SIRT1Q96EB6 747 aa27.08■■□□□ 1.93
HERC6-204ENST00000502870 NRAPQ86VF7 1730 aa27.07■■□□□ 1.92
HERC6-204ENST00000502870 PLEKHG5O94827 1062 aa27.07■■□□□ 1.92
HERC6-204ENST00000502870 PPARGC1BQ86YN6 1023 aaKnown RBP27.07■■□□□ 1.92
HERC6-204ENST00000502870 PIK3C2GO75747 1445 aa27.07■■□□□ 1.92
HERC6-204ENST00000502870 RGL3Q3MIN7 710 aa27.06■■□□□ 1.92
HERC6-204ENST00000502870 FAM98CQ17RN3 349 aaKnown RBP27.04■■□□□ 1.92
HERC6-204ENST00000502870 SPATA31E1Q6ZUB1 1445 aa27.04■■□□□ 1.92
HERC6-204ENST00000502870 FAM83GA6ND36 823 aa27.03■■□□□ 1.92
HERC6-204ENST00000502870 COL14A1Q05707 1796 aaKnown RBP27.03■■□□□ 1.92
HERC6-204ENST00000502870 EN1Q05925 392 aaPredicted RBP27.01■■□□□ 1.91
HERC6-204ENST00000502870 DISP2A7MBM2 1401 aa27■■□□□ 1.91
HERC6-204ENST00000502870 BTG4Q9NY30 223 aa27■■□□□ 1.91
HERC6-204ENST00000502870 R3HDM1Q15032 1099 aaKnown RBP26.99■■□□□ 1.91
HERC6-204ENST00000502870 ADGRB2O60241 1585 aa26.99■■□□□ 1.91
HERC6-204ENST00000502870 TNS1Q9HBL0 1735 aaKnown RBP26.98■■□□□ 1.91
HERC6-204ENST00000502870 ANKARQ7Z5J8 1434 aa26.98■■□□□ 1.91
HERC6-204ENST00000502870 DHX57Q6P158 1386 aaKnown RBP26.97■■□□□ 1.91
HERC6-204ENST00000502870 TRPM3Q9HCF6 1732 aaPredicted RBP26.95■■□□□ 1.9
HERC6-204ENST00000502870 THSD7AQ9UPZ6 1657 aa26.94■■□□□ 1.9
HERC6-204ENST00000502870 C14orf93Q9H972 538 aaKnown RBP26.93■■□□□ 1.9
HERC6-204ENST00000502870 GPRASP1Q5JY77 1395 aa26.93■■□□□ 1.9
HERC6-204ENST00000502870 SPATA31A5Q5VU36 1347 aa26.92■■□□□ 1.9
HERC6-204ENST00000502870 SPATA31A7Q8IWB4 1347 aa26.92■■□□□ 1.9
HERC6-204ENST00000502870 ALS2Q96Q42 1657 aa26.92■■□□□ 1.9
HERC6-204ENST00000502870 PMFBP1Q8TBY8 1022 aa26.91■■□□□ 1.9
HERC6-204ENST00000502870 PRAM1Q96QH2 718 aa26.91■■□□□ 1.9
HERC6-204ENST00000502870 EIF3AQ14152 1382 aaKnown RBP26.89■■□□□ 1.9
HERC6-204ENST00000502870 PARD3Q8TEW0 1356 aa26.89■■□□□ 1.9
HERC6-204ENST00000502870 SAFB2Q14151 953 aaKnown RBP eCLIP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms