RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 ANP32CO43423 234 aa18.6■□□□□ 0.57
SGCA-203ENST00000502555 SAFB2Q14151 953 aaKnown RBP eCLIP18.6■□□□□ 0.57
SGCA-203ENST00000502555 AMOTL2Q9Y2J4 779 aa18.6■□□□□ 0.57
SGCA-203ENST00000502555 NCKAP5LQ9HCH0 1330 aa18.59■□□□□ 0.57
SGCA-203ENST00000502555 WAPLQ7Z5K2 1190 aa18.59■□□□□ 0.57
SGCA-203ENST00000502555 MINK1Q8N4C8 1332 aaPredicted RBP18.58■□□□□ 0.57
SGCA-203ENST00000502555 ATAD2Q6PL18 1390 aa18.57■□□□□ 0.56
SGCA-203ENST00000502555 NINLQ9Y2I6 1382 aa18.57■□□□□ 0.56
SGCA-203ENST00000502555 MYOM1P52179 1685 aa18.57■□□□□ 0.56
SGCA-203ENST00000502555 ADGRB2O60241 1585 aa18.56■□□□□ 0.56
SGCA-203ENST00000502555 HSPA2P54652 639 aa18.53■□□□□ 0.56
SGCA-203ENST00000502555 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
SGCA-203ENST00000502555 PANK3Q9H999 370 aa18.53■□□□□ 0.56
SGCA-203ENST00000502555 NWD1Q149M9 1564 aa18.53■□□□□ 0.56
SGCA-203ENST00000502555 KCNA6P17658 529 aa18.52■□□□□ 0.56
SGCA-203ENST00000502555 CHD2O14647 1828 aaKnown RBP18.52■□□□□ 0.56
SGCA-203ENST00000502555 WASLO00401 505 aaPredicted RBP18.51■□□□□ 0.55
SGCA-203ENST00000502555 PER1O15534 1290 aaPredicted RBP18.51■□□□□ 0.55
SGCA-203ENST00000502555 CDK19Q9BWU1 502 aa18.51■□□□□ 0.55
SGCA-203ENST00000502555 CABP2Q9NPB3 220 aa18.51■□□□□ 0.55
SGCA-203ENST00000502555 KTN1Q86UP2 1357 aaKnown RBP18.5■□□□□ 0.55
SGCA-203ENST00000502555 PRKRIP1Q9H875 184 aaPredicted RBP18.49■□□□□ 0.55
SGCA-203ENST00000502555 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.49■□□□□ 0.55
SGCA-203ENST00000502555 NKTRP30414 1462 aaKnown RBP18.48■□□□□ 0.55
SGCA-203ENST00000502555 ANKRD36BQ8N2N9 1353 aa18.48■□□□□ 0.55
SGCA-203ENST00000502555 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
SGCA-203ENST00000502555 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
SGCA-203ENST00000502555 KNSTRNQ9Y448 316 aa18.47■□□□□ 0.55
SGCA-203ENST00000502555 NPC1L1Q9UHC9 1359 aa18.46■□□□□ 0.55
SGCA-203ENST00000502555 SLC12A5Q9H2X9 1139 aa18.46■□□□□ 0.55
SGCA-203ENST00000502555 ATP7BP35670 1465 aa18.44■□□□□ 0.54
SGCA-203ENST00000502555 RALBP1Q15311 655 aa18.44■□□□□ 0.54
SGCA-203ENST00000502555 STRCQ7RTU9 1775 aa18.43■□□□□ 0.54
SGCA-203ENST00000502555 TERF2IPQ9NYB0 399 aa18.43■□□□□ 0.54
SGCA-203ENST00000502555 ADGRL3Q9HAR2 1447 aa18.42■□□□□ 0.54
SGCA-203ENST00000502555 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
SGCA-203ENST00000502555 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
SGCA-203ENST00000502555 NUDT16Q96DE0 195 aaKnown RBP18.42■□□□□ 0.54
SGCA-203ENST00000502555 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
SGCA-203ENST00000502555 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
SGCA-203ENST00000502555 CARD14Q9BXL6 1004 aa18.41■□□□□ 0.54
SGCA-203ENST00000502555 ANKARQ7Z5J8 1434 aa18.41■□□□□ 0.54
SGCA-203ENST00000502555 NSD3Q9BZ95 1437 aa18.41■□□□□ 0.54
SGCA-203ENST00000502555 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
SGCA-203ENST00000502555 CD163L1Q9NR16 1453 aa18.4■□□□□ 0.54
SGCA-203ENST00000502555 PPIP5K1Q6PFW1 1433 aa18.4■□□□□ 0.54
SGCA-203ENST00000502555 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
SGCA-203ENST00000502555 HDGFL2Q7Z4V5 671 aaPredicted RBP18.4■□□□□ 0.54
SGCA-203ENST00000502555 NCOA3Q9Y6Q9 1424 aa18.39■□□□□ 0.53
SGCA-203ENST00000502555 PRR36Q9H6K5 1346 aa18.39■□□□□ 0.53
SGCA-203ENST00000502555 CABP1Q9NZU7 370 aa18.39■□□□□ 0.53
SGCA-203ENST00000502555 DMRT2Q9Y5R5 561 aa18.38■□□□□ 0.53
SGCA-203ENST00000502555 NALCNQ8IZF0 1738 aa18.38■□□□□ 0.53
SGCA-203ENST00000502555 NSD2O96028 1365 aa18.37■□□□□ 0.53
SGCA-203ENST00000502555 TOPAZ1Q8N9V7 1692 aa18.37■□□□□ 0.53
SGCA-203ENST00000502555 PROSER2Q86WR7 435 aaPredicted RBP18.37■□□□□ 0.53
SGCA-203ENST00000502555 CPSF1Q10570 1443 aaKnown RBP18.36■□□□□ 0.53
SGCA-203ENST00000502555 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
SGCA-203ENST00000502555 MYBBP1AQ9BQG0 1328 aaKnown RBP18.36■□□□□ 0.53
SGCA-203ENST00000502555 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
SGCA-203ENST00000502555 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
SGCA-203ENST00000502555 PLEKHG3A1L390 1219 aa18.34■□□□□ 0.53
SGCA-203ENST00000502555 ITSN1Q15811 1721 aa18.33■□□□□ 0.52
SGCA-203ENST00000502555 DCCP43146 1447 aa18.32■□□□□ 0.52
SGCA-203ENST00000502555 CNGB1Q14028 1251 aaPredicted RBP18.32■□□□□ 0.52
SGCA-203ENST00000502555 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
SGCA-203ENST00000502555 C14orf37Q86TY3 774 aa18.32■□□□□ 0.52
SGCA-203ENST00000502555 ZNF692Q9BU19 519 aaPredicted RBP18.32■□□□□ 0.52
SGCA-203ENST00000502555 TMEM94Q12767 1356 aa18.32■□□□□ 0.52
SGCA-203ENST00000502555 STRCP1A6NGW2 1772 aa18.32■□□□□ 0.52
SGCA-203ENST00000502555 NLRP13Q86W25 1043 aa18.31■□□□□ 0.52
SGCA-203ENST00000502555 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
SGCA-203ENST00000502555 C19orf44Q9H6X5 657 aa18.3■□□□□ 0.52
SGCA-203ENST00000502555 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
SGCA-203ENST00000502555 MRS2Q9HD23 443 aa18.29■□□□□ 0.52
SGCA-203ENST00000502555 POLR3AO14802 1390 aaPredicted RBP18.29■□□□□ 0.52
SGCA-203ENST00000502555 NUTM2FA1L443 756 aa18.28■□□□□ 0.52
SGCA-203ENST00000502555 MON2Q7Z3U7 1717 aa18.28■□□□□ 0.52
SGCA-203ENST00000502555 ACEP12821 1306 aa18.28■□□□□ 0.52
SGCA-203ENST00000502555 AKAP12Q02952 1782 aa18.28■□□□□ 0.52
SGCA-203ENST00000502555 ZNF335Q9H4Z2 1342 aaPredicted RBP18.27■□□□□ 0.52
SGCA-203ENST00000502555 USP6P35125 1406 aa18.26■□□□□ 0.51
SGCA-203ENST00000502555 LRRC7Q96NW7 1537 aa18.25■□□□□ 0.51
SGCA-203ENST00000502555 MORC1Q86VD1 984 aa18.25■□□□□ 0.51
SGCA-203ENST00000502555 MSH6P52701 1360 aa18.25■□□□□ 0.51
SGCA-203ENST00000502555 PPP2R1AP30153 589 aa18.24■□□□□ 0.51
SGCA-203ENST00000502555 CCDC184Q52MB2 194 aa18.24■□□□□ 0.51
SGCA-203ENST00000502555 NRKQ7Z2Y5 1582 aa18.24■□□□□ 0.51
SGCA-203ENST00000502555 FYB1O15117 783 aa18.23■□□□□ 0.51
SGCA-203ENST00000502555 NGDNQ8NEJ9 315 aaKnown RBP18.23■□□□□ 0.51
SGCA-203ENST00000502555 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
SGCA-203ENST00000502555 ATF3P18847 181 aa18.23■□□□□ 0.51
SGCA-203ENST00000502555 CADPS2Q86UW7 1296 aa18.23■□□□□ 0.51
SGCA-203ENST00000502555 PHF8Q9UPP1 1060 aa18.23■□□□□ 0.51
SGCA-203ENST00000502555 C1orf167Q5SNV9 1468 aa18.22■□□□□ 0.51
SGCA-203ENST00000502555 ANKRD26Q9UPS8 1709 aa18.21■□□□□ 0.51
SGCA-203ENST00000502555 KIF20BQ96Q89 1820 aa18.21■□□□□ 0.51
SGCA-203ENST00000502555 MST1RQ04912 1400 aa18.21■□□□□ 0.51
SGCA-203ENST00000502555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.21■□□□□ 0.51
SGCA-203ENST00000502555 PMFBP1Q8TBY8 1022 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms