RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
CRNDE-202ENST00000502066 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
CRNDE-202ENST00000502066 YY1P25490 414 aa12.74□□□□□ -0.37
CRNDE-202ENST00000502066 CDCA7LQ96GN5 454 aa12.74□□□□□ -0.37
CRNDE-202ENST00000502066 FANCAO15360 1455 aa12.73□□□□□ -0.37
CRNDE-202ENST00000502066 UACAQ9BZF9 1416 aa12.73□□□□□ -0.37
CRNDE-202ENST00000502066 PPP4CP60510 307 aa12.73□□□□□ -0.37
CRNDE-202ENST00000502066 SPRYD3Q8NCJ5 442 aa12.73□□□□□ -0.37
CRNDE-202ENST00000502066 SIGLEC1Q9BZZ2 1709 aa12.73□□□□□ -0.37
CRNDE-202ENST00000502066 SAMD7Q7Z3H4 446 aa12.72□□□□□ -0.37
CRNDE-202ENST00000502066 ARHGEF40Q8TER5 1519 aa12.72□□□□□ -0.37
CRNDE-202ENST00000502066 ALKQ9UM73 1620 aa12.71□□□□□ -0.37
CRNDE-202ENST00000502066 Q6ZNB5 142 aa12.71□□□□□ -0.37
CRNDE-202ENST00000502066 TNIKQ9UKE5 1360 aa12.7□□□□□ -0.38
CRNDE-202ENST00000502066 SPDYE16A6NNV3 312 aaPredicted RBP12.7□□□□□ -0.38
CRNDE-202ENST00000502066 PRSS12P56730 875 aa12.7□□□□□ -0.38
CRNDE-202ENST00000502066 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
CRNDE-202ENST00000502066 E2F4Q16254 413 aa12.69□□□□□ -0.38
CRNDE-202ENST00000502066 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
CRNDE-202ENST00000502066 CDHR5Q9HBB8 845 aa12.67□□□□□ -0.38
CRNDE-202ENST00000502066 PNMA3Q9UL41 463 aa12.67□□□□□ -0.38
CRNDE-202ENST00000502066 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
CRNDE-202ENST00000502066 TJAP1Q5JTD0 557 aa12.65□□□□□ -0.38
CRNDE-202ENST00000502066 TATDN2Q93075 761 aa12.65□□□□□ -0.38
CRNDE-202ENST00000502066 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
CRNDE-202ENST00000502066 PHLDB1Q86UU1 1377 aa12.64□□□□□ -0.39
CRNDE-202ENST00000502066 RNF40O75150 1001 aa12.63□□□□□ -0.39
CRNDE-202ENST00000502066 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
CRNDE-202ENST00000502066 WDR70Q9NW82 654 aa12.63□□□□□ -0.39
CRNDE-202ENST00000502066 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.63□□□□□ -0.39
CRNDE-202ENST00000502066 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
CRNDE-202ENST00000502066 OSBPP22059 807 aa12.62□□□□□ -0.39
CRNDE-202ENST00000502066 NUDT18Q6ZVK8 323 aa12.62□□□□□ -0.39
CRNDE-202ENST00000502066 MTRQ99707 1265 aa12.61□□□□□ -0.39
CRNDE-202ENST00000502066 ARHGEF12Q9NZN5 1544 aa12.61□□□□□ -0.39
CRNDE-202ENST00000502066 AKNAQ7Z591 1439 aa12.61□□□□□ -0.39
CRNDE-202ENST00000502066 NBPF26B4DH59 902 aa12.59□□□□□ -0.39
CRNDE-202ENST00000502066 ZNF516Q92618 1163 aa12.59□□□□□ -0.39
CRNDE-202ENST00000502066 CPS1P31327 1500 aa12.58□□□□□ -0.4
CRNDE-202ENST00000502066 CARMIL2Q6F5E8 1435 aa12.58□□□□□ -0.4
CRNDE-202ENST00000502066 GFRA3O60609 400 aa12.57□□□□□ -0.4
CRNDE-202ENST00000502066 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
CRNDE-202ENST00000502066 PPP1R18Q6NYC8 613 aa12.56□□□□□ -0.4
CRNDE-202ENST00000502066 ARIH1Q9Y4X5 557 aaPredicted RBP12.56□□□□□ -0.4
CRNDE-202ENST00000502066 LCE2BO14633 110 aa12.55□□□□□ -0.4
CRNDE-202ENST00000502066 APLP1P51693 650 aa12.55□□□□□ -0.4
CRNDE-202ENST00000502066 IL21Q9HBE4 155 aa12.55□□□□□ -0.4
CRNDE-202ENST00000502066 LRRC7Q96NW7 1537 aa12.55□□□□□ -0.4
CRNDE-202ENST00000502066 NKX2-3Q8TAU0 364 aa12.54□□□□□ -0.4
CRNDE-202ENST00000502066 LRP5O75197 1615 aa12.53□□□□□ -0.4
CRNDE-202ENST00000502066 HDGFP51858 240 aaKnown RBP12.53□□□□□ -0.4
CRNDE-202ENST00000502066 NPDC1Q9NQX5 325 aaPredicted RBP12.52□□□□□ -0.41
CRNDE-202ENST00000502066 RXRBP28702 533 aa12.51□□□□□ -0.41
CRNDE-202ENST00000502066 PADI6Q6TGC4 694 aa12.51□□□□□ -0.41
CRNDE-202ENST00000502066 C3P01024 1663 aa12.51□□□□□ -0.41
CRNDE-202ENST00000502066 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
CRNDE-202ENST00000502066 TRAPPC8Q9Y2L5 1435 aa12.5□□□□□ -0.41
CRNDE-202ENST00000502066 NEO1Q92859 1461 aa12.5□□□□□ -0.41
CRNDE-202ENST00000502066 SHANK2Q9UPX8 1470 aa12.5□□□□□ -0.41
CRNDE-202ENST00000502066 RAPGEF6Q8TEU7 1601 aa12.5□□□□□ -0.41
CRNDE-202ENST00000502066 ZFYVE16Q7Z3T8 1539 aa12.49□□□□□ -0.41
CRNDE-202ENST00000502066 COPS2P61201 443 aa12.49□□□□□ -0.41
CRNDE-202ENST00000502066 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
CRNDE-202ENST00000502066 LAPTM4AQ15012 233 aa12.48□□□□□ -0.41
CRNDE-202ENST00000502066 ZNF772Q68DY9 489 aaPredicted RBP12.47□□□□□ -0.41
CRNDE-202ENST00000502066 TRAF7Q6Q0C0 670 aa12.47□□□□□ -0.41
CRNDE-202ENST00000502066 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.47□□□□□ -0.41
CRNDE-202ENST00000502066 TTC13Q8NBP0 860 aa12.46□□□□□ -0.41
CRNDE-202ENST00000502066 RBM27Q9P2N5 1060 aaKnown RBP12.46□□□□□ -0.41
CRNDE-202ENST00000502066 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
CRNDE-202ENST00000502066 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
CRNDE-202ENST00000502066 NUTM2DQ5VT03 806 aaPredicted RBP12.45□□□□□ -0.42
CRNDE-202ENST00000502066 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
CRNDE-202ENST00000502066 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
CRNDE-202ENST00000502066 EFCAB5A4FU69 1503 aa12.45□□□□□ -0.42
CRNDE-202ENST00000502066 DENND4BO75064 1496 aaPredicted RBP12.45□□□□□ -0.42
CRNDE-202ENST00000502066 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
CRNDE-202ENST00000502066 C1QTNF8P60827 252 aa12.44□□□□□ -0.42
CRNDE-202ENST00000502066 TCOF1Q13428 1488 aaKnown RBP12.43□□□□□ -0.42
CRNDE-202ENST00000502066 CDK12Q9NYV4 1490 aaPredicted RBP12.43□□□□□ -0.42
CRNDE-202ENST00000502066 SUPT6HQ7KZ85 1726 aaKnown RBP12.42□□□□□ -0.42
CRNDE-202ENST00000502066 MLLT3P42568 568 aaPredicted RBP12.42□□□□□ -0.42
CRNDE-202ENST00000502066 PLA2R1Q13018 1463 aa12.41□□□□□ -0.42
CRNDE-202ENST00000502066 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
CRNDE-202ENST00000502066 FHOD3Q2V2M9 1422 aa12.4□□□□□ -0.42
CRNDE-202ENST00000502066 NRG2O14511 850 aaPredicted RBP12.4□□□□□ -0.42
CRNDE-202ENST00000502066 EYA1Q99502 592 aa12.4□□□□□ -0.42
CRNDE-202ENST00000502066 V9GY48 417 aaPredicted RBP12.4□□□□□ -0.42
CRNDE-202ENST00000502066 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.43
CRNDE-202ENST00000502066 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
CRNDE-202ENST00000502066 ABCA9Q8IUA7 1624 aa12.39□□□□□ -0.43
CRNDE-202ENST00000502066 RNF17Q9BXT8 1623 aaKnown RBP12.38□□□□□ -0.43
CRNDE-202ENST00000502066 ZMYM4Q5VZL5 1548 aa12.37□□□□□ -0.43
CRNDE-202ENST00000502066 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
CRNDE-202ENST00000502066 MEX3CQ5U5Q3 659 aaKnown RBP12.36□□□□□ -0.43
CRNDE-202ENST00000502066 CEP350Q5VT06 3117 aa12.36□□□□□ -0.43
CRNDE-202ENST00000502066 ZPR1O75312 459 aa12.35□□□□□ -0.43
CRNDE-202ENST00000502066 DISP1Q96F81 1524 aa12.35□□□□□ -0.43
CRNDE-202ENST00000502066 ESF1Q9H501 851 aaKnown RBP12.34□□□□□ -0.43
CRNDE-202ENST00000502066 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms