RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 SAFB2Q14151 953 aaKnown RBP eCLIP27.44■■□□□ 1.98
LINC01550-201ENST00000499006 LTBP4Q8N2S1 1624 aa27.44■■□□□ 1.98
LINC01550-201ENST00000499006 LRRC7Q96NW7 1537 aa27.42■■□□□ 1.98
LINC01550-201ENST00000499006 PROSER2Q86WR7 435 aaPredicted RBP27.41■■□□□ 1.98
LINC01550-201ENST00000499006 NCOA3Q9Y6Q9 1424 aa27.41■■□□□ 1.98
LINC01550-201ENST00000499006 TULP4Q9NRJ4 1543 aa27.4■■□□□ 1.98
LINC01550-201ENST00000499006 MINK1Q8N4C8 1332 aaPredicted RBP27.39■■□□□ 1.98
LINC01550-201ENST00000499006 SLC24A1O60721 1099 aa27.38■■□□□ 1.97
LINC01550-201ENST00000499006 RBM33Q96EV2 1170 aaKnown RBP27.38■■□□□ 1.97
LINC01550-201ENST00000499006 TMEM94Q12767 1356 aa27.37■■□□□ 1.97
LINC01550-201ENST00000499006 ADGRL3Q9HAR2 1447 aa27.37■■□□□ 1.97
LINC01550-201ENST00000499006 DISP3Q9P2K9 1392 aa27.36■■□□□ 1.97
LINC01550-201ENST00000499006 CDC42BPGQ6DT37 1551 aa27.35■■□□□ 1.97
LINC01550-201ENST00000499006 C11orf95C9JLR9 678 aaPredicted RBP27.34■■□□□ 1.97
LINC01550-201ENST00000499006 TMF1P82094 1093 aa27.34■■□□□ 1.97
LINC01550-201ENST00000499006 FMN2Q9NZ56 1722 aa27.33■■□□□ 1.97
LINC01550-201ENST00000499006 EVC2Q86UK5 1308 aa27.32■■□□□ 1.96
LINC01550-201ENST00000499006 ZNF316A6NFI3 1004 aaPredicted RBP27.32■■□□□ 1.96
LINC01550-201ENST00000499006 RGPD8O14715 1765 aaPredicted RBP27.3■■□□□ 1.96
LINC01550-201ENST00000499006 WASLO00401 505 aaPredicted RBP27.3■■□□□ 1.96
LINC01550-201ENST00000499006 CDK19Q9BWU1 502 aa27.27■■□□□ 1.96
LINC01550-201ENST00000499006 C19orf44Q9H6X5 657 aa27.27■■□□□ 1.96
LINC01550-201ENST00000499006 USP32Q8NFA0 1604 aa27.27■■□□□ 1.96
LINC01550-201ENST00000499006 DCCP43146 1447 aa27.27■■□□□ 1.96
LINC01550-201ENST00000499006 KIF7Q2M1P5 1343 aa27.27■■□□□ 1.96
LINC01550-201ENST00000499006 WASHC2AQ641Q2 1341 aa27.27■■□□□ 1.96
LINC01550-201ENST00000499006 C14orf37Q86TY3 774 aa27.26■■□□□ 1.95
LINC01550-201ENST00000499006 PUS7Q96PZ0 661 aaKnown RBP27.26■■□□□ 1.95
LINC01550-201ENST00000499006 CDCA8Q53HL2 280 aa27.25■■□□□ 1.95
LINC01550-201ENST00000499006 MYOM1P52179 1685 aa27.25■■□□□ 1.95
LINC01550-201ENST00000499006 CCDC7Q96M83 1385 aa27.25■■□□□ 1.95
LINC01550-201ENST00000499006 TOPAZ1Q8N9V7 1692 aa27.24■■□□□ 1.95
LINC01550-201ENST00000499006 ITSN1Q15811 1721 aa27.24■■□□□ 1.95
LINC01550-201ENST00000499006 MSH6P52701 1360 aa27.24■■□□□ 1.95
LINC01550-201ENST00000499006 CABP2Q9NPB3 220 aa27.23■■□□□ 1.95
LINC01550-201ENST00000499006 ATP7BP35670 1465 aa27.22■■□□□ 1.95
LINC01550-201ENST00000499006 SRPK2P78362 688 aaKnown RBP27.21■■□□□ 1.95
LINC01550-201ENST00000499006 ANKARQ7Z5J8 1434 aa27.19■■□□□ 1.94
LINC01550-201ENST00000499006 ATAD2Q6PL18 1390 aa27.19■■□□□ 1.94
LINC01550-201ENST00000499006 PRR36Q9H6K5 1346 aa27.18■■□□□ 1.94
LINC01550-201ENST00000499006 ATF3P18847 181 aa27.16■■□□□ 1.94
LINC01550-201ENST00000499006 CADPS2Q86UW7 1296 aa27.16■■□□□ 1.94
LINC01550-201ENST00000499006 NUDT16Q96DE0 195 aaKnown RBP27.16■■□□□ 1.94
LINC01550-201ENST00000499006 MST1RQ04912 1400 aa27.15■■□□□ 1.94
LINC01550-201ENST00000499006 IQSEC2Q5JU85 1478 aa27.15■■□□□ 1.94
LINC01550-201ENST00000499006 POLR3GLQ9BT43 218 aa27.13■■□□□ 1.93
LINC01550-201ENST00000499006 NUTM2FA1L443 756 aa27.13■■□□□ 1.93
LINC01550-201ENST00000499006 CCDC61Q9Y6R9 512 aa27.13■■□□□ 1.93
LINC01550-201ENST00000499006 C1orf167Q5SNV9 1468 aa27.12■■□□□ 1.93
LINC01550-201ENST00000499006 NINLQ9Y2I6 1382 aa27.12■■□□□ 1.93
LINC01550-201ENST00000499006 AKAP12Q02952 1782 aa27.11■■□□□ 1.93
LINC01550-201ENST00000499006 PPIP5K1Q6PFW1 1433 aa27.11■■□□□ 1.93
LINC01550-201ENST00000499006 SLC12A5Q9H2X9 1139 aa27.07■■□□□ 1.92
LINC01550-201ENST00000499006 KIF1AQ12756 1690 aa27.07■■□□□ 1.92
LINC01550-201ENST00000499006 CERKQ8TCT0 537 aa27.06■■□□□ 1.92
LINC01550-201ENST00000499006 CABP1Q9NZU7 370 aa27.06■■□□□ 1.92
LINC01550-201ENST00000499006 CD163L1Q9NR16 1453 aa27.06■■□□□ 1.92
LINC01550-201ENST00000499006 PLEKHG3A1L390 1219 aa27.05■■□□□ 1.92
LINC01550-201ENST00000499006 TMC1Q8TDI8 760 aa27.05■■□□□ 1.92
LINC01550-201ENST00000499006 MON2Q7Z3U7 1717 aa27.05■■□□□ 1.92
LINC01550-201ENST00000499006 SLAIN2Q9P270 581 aa27.04■■□□□ 1.92
LINC01550-201ENST00000499006 CPSF1Q10570 1443 aaKnown RBP27.02■■□□□ 1.92
LINC01550-201ENST00000499006 DDX10Q13206 875 aaKnown RBP27.01■■□□□ 1.91
LINC01550-201ENST00000499006 ORAI2Q96SN7 254 aa27.01■■□□□ 1.91
LINC01550-201ENST00000499006 POLR3AO14802 1390 aaPredicted RBP27.01■■□□□ 1.91
LINC01550-201ENST00000499006 ANKRD36BQ8N2N9 1353 aa27.01■■□□□ 1.91
LINC01550-201ENST00000499006 ESCO1Q5FWF5 840 aa27■■□□□ 1.91
LINC01550-201ENST00000499006 PHF8Q9UPP1 1060 aa27■■□□□ 1.91
LINC01550-201ENST00000499006 A0A1W2PP64 1363 aa26.99■■□□□ 1.91
LINC01550-201ENST00000499006 PMFBP1Q8TBY8 1022 aa26.99■■□□□ 1.91
LINC01550-201ENST00000499006 PANK3Q9H999 370 aa26.99■■□□□ 1.91
LINC01550-201ENST00000499006 ACEP12821 1306 aa26.98■■□□□ 1.91
LINC01550-201ENST00000499006 ROBO1Q9Y6N7 1651 aa26.98■■□□□ 1.91
LINC01550-201ENST00000499006 TERF2IPQ9NYB0 399 aa26.97■■□□□ 1.91
LINC01550-201ENST00000499006 NRKQ7Z2Y5 1582 aa26.97■■□□□ 1.91
LINC01550-201ENST00000499006 BRINP3Q76B58 766 aa26.95■■□□□ 1.91
LINC01550-201ENST00000499006 NHSL1Q5SYE7 1610 aa26.95■■□□□ 1.9
LINC01550-201ENST00000499006 TOM1O60784 492 aa26.94■■□□□ 1.9
LINC01550-201ENST00000499006 HDGFL2Q7Z4V5 671 aaPredicted RBP26.93■■□□□ 1.9
LINC01550-201ENST00000499006 ZNF692Q9BU19 519 aaPredicted RBP26.93■■□□□ 1.9
LINC01550-201ENST00000499006 CARD14Q9BXL6 1004 aa26.93■■□□□ 1.9
LINC01550-201ENST00000499006 NGDNQ8NEJ9 315 aaKnown RBP26.93■■□□□ 1.9
LINC01550-201ENST00000499006 PER1O15534 1290 aaPredicted RBP26.92■■□□□ 1.9
LINC01550-201ENST00000499006 KTN1Q86UP2 1357 aaKnown RBP26.92■■□□□ 1.9
LINC01550-201ENST00000499006 USP6P35125 1406 aa26.91■■□□□ 1.9
LINC01550-201ENST00000499006 TRPM3Q9HCF6 1732 aaPredicted RBP26.91■■□□□ 1.9
LINC01550-201ENST00000499006 UBAP1LF5GYI3 381 aa26.89■■□□□ 1.9
LINC01550-201ENST00000499006 EDC4Q6P2E9 1401 aaKnown RBP26.89■■□□□ 1.9
LINC01550-201ENST00000499006 SSH2Q76I76 1423 aa26.89■■□□□ 1.9
LINC01550-201ENST00000499006 KIF20BQ96Q89 1820 aa26.89■■□□□ 1.89
LINC01550-201ENST00000499006 NSD3Q9BZ95 1437 aa26.88■■□□□ 1.89
LINC01550-201ENST00000499006 FOXO3O43524 673 aa26.88■■□□□ 1.89
LINC01550-201ENST00000499006 NPHP3Q7Z494 1330 aa26.86■■□□□ 1.89
LINC01550-201ENST00000499006 AHDC1Q5TGY3 1603 aaPredicted RBP26.86■■□□□ 1.89
LINC01550-201ENST00000499006 PXDNQ92626 1479 aa26.85■■□□□ 1.89
LINC01550-201ENST00000499006 BRD4O60885 1362 aaPredicted RBP26.85■■□□□ 1.89
LINC01550-201ENST00000499006 ANKRD26Q9UPS8 1709 aa26.83■■□□□ 1.89
LINC01550-201ENST00000499006 PSME1Q06323 249 aa26.83■■□□□ 1.89
LINC01550-201ENST00000499006 DDX17Q92841 729 aaKnown RBP26.83■■□□□ 1.89
LINC01550-201ENST00000499006 ALS2Q96Q42 1657 aa26.83■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms