RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 ATRNO75882 1429 aa13.94□□□□□ -0.18
CCDC171-209ENST00000498725 XPCQ01831 940 aaPredicted RBP13.94□□□□□ -0.18
CCDC171-209ENST00000498725 PTCH1Q13635 1447 aa13.93□□□□□ -0.18
CCDC171-209ENST00000498725 BRWD3Q6RI45 1802 aa13.92□□□□□ -0.18
CCDC171-209ENST00000498725 ESCO1Q5FWF5 840 aa13.92□□□□□ -0.18
CCDC171-209ENST00000498725 FNBP4Q8N3X1 1017 aaPredicted RBP13.92□□□□□ -0.18
CCDC171-209ENST00000498725 NUTM2FA1L443 756 aa13.91□□□□□ -0.18
CCDC171-209ENST00000498725 PPLO60437 1756 aa13.91□□□□□ -0.18
CCDC171-209ENST00000498725 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
CCDC171-209ENST00000498725 BCL9LQ86UU0 1499 aa13.89□□□□□ -0.19
CCDC171-209ENST00000498725 MYOM2P54296 1465 aa13.88□□□□□ -0.19
CCDC171-209ENST00000498725 VGFO15240 615 aaPredicted RBP13.88□□□□□ -0.19
CCDC171-209ENST00000498725 FOXO3O43524 673 aa13.88□□□□□ -0.19
CCDC171-209ENST00000498725 NPHP3Q7Z494 1330 aa13.88□□□□□ -0.19
CCDC171-209ENST00000498725 EP400Q96L91 3159 aa13.87□□□□□ -0.19
CCDC171-209ENST00000498725 PXDNQ92626 1479 aa13.87□□□□□ -0.19
CCDC171-209ENST00000498725 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.87□□□□□ -0.19
CCDC171-209ENST00000498725 GJD4Q96KN9 370 aaPredicted RBP13.87□□□□□ -0.19
CCDC171-209ENST00000498725 SRCAPQ6ZRS2 3230 aa13.87□□□□□ -0.19
CCDC171-209ENST00000498725 CCDC125Q86Z20 511 aa13.86□□□□□ -0.19
CCDC171-209ENST00000498725 STK26Q9P289 416 aa13.86□□□□□ -0.19
CCDC171-209ENST00000498725 GLI3P10071 1580 aa13.86□□□□□ -0.19
CCDC171-209ENST00000498725 CDC42BPGQ6DT37 1551 aa13.85□□□□□ -0.19
CCDC171-209ENST00000498725 HFM1A2PYH4 1435 aa13.85□□□□□ -0.19
CCDC171-209ENST00000498725 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
CCDC171-209ENST00000498725 RGPD8O14715 1765 aaPredicted RBP13.85□□□□□ -0.19
CCDC171-209ENST00000498725 RALGAPBQ86X10 1494 aa13.84□□□□□ -0.19
CCDC171-209ENST00000498725 NAIPQ13075 1403 aa13.83□□□□□ -0.2
CCDC171-209ENST00000498725 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
CCDC171-209ENST00000498725 PLCH1Q4KWH8 1693 aa13.82□□□□□ -0.2
CCDC171-209ENST00000498725 HAP1P54257 671 aaPredicted RBP13.82□□□□□ -0.2
CCDC171-209ENST00000498725 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
CCDC171-209ENST00000498725 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
CCDC171-209ENST00000498725 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
CCDC171-209ENST00000498725 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
CCDC171-209ENST00000498725 FMN2Q9NZ56 1722 aa13.81□□□□□ -0.2
CCDC171-209ENST00000498725 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
CCDC171-209ENST00000498725 IFT172Q9UG01 1749 aa13.8□□□□□ -0.2
CCDC171-209ENST00000498725 LRPPRCP42704 1394 aaKnown RBP13.8□□□□□ -0.2
CCDC171-209ENST00000498725 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
CCDC171-209ENST00000498725 A0A0G2JS52 829 aa13.79□□□□□ -0.2
CCDC171-209ENST00000498725 MYT1Q01538 1121 aa13.79□□□□□ -0.2
CCDC171-209ENST00000498725 RGL3Q3MIN7 710 aa13.79□□□□□ -0.2
CCDC171-209ENST00000498725 SEPT12Q8IYM1 358 aa13.79□□□□□ -0.2
CCDC171-209ENST00000498725 CABLES1Q8TDN4 633 aa13.79□□□□□ -0.2
CCDC171-209ENST00000498725 RPGRIP1LQ68CZ1 1315 aa13.79□□□□□ -0.2
CCDC171-209ENST00000498725 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
CCDC171-209ENST00000498725 SLIT2O94813 1529 aa13.79□□□□□ -0.2
CCDC171-209ENST00000498725 PSDA5PKW4 1024 aaPredicted RBP13.78□□□□□ -0.2
CCDC171-209ENST00000498725 TMEM132EQ6IEE7 984 aa13.78□□□□□ -0.2
CCDC171-209ENST00000498725 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
CCDC171-209ENST00000498725 KRT28Q7Z3Y7 464 aa13.78□□□□□ -0.2
CCDC171-209ENST00000498725 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
CCDC171-209ENST00000498725 SPATA31A3Q5VYP0 1347 aa13.78□□□□□ -0.2
CCDC171-209ENST00000498725 ADGRF5Q8IZF2 1346 aa13.78□□□□□ -0.2
CCDC171-209ENST00000498725 PLEKHH1Q9ULM0 1364 aa13.78□□□□□ -0.2
CCDC171-209ENST00000498725 ABCA3Q99758 1704 aa13.78□□□□□ -0.2
CCDC171-209ENST00000498725 LRP5O75197 1615 aa13.77□□□□□ -0.21
CCDC171-209ENST00000498725 KNDC1Q76NI1 1749 aa13.77□□□□□ -0.21
CCDC171-209ENST00000498725 NWD2Q9ULI1 1742 aa13.76□□□□□ -0.21
CCDC171-209ENST00000498725 RRBP1Q9P2E9 1410 aaKnown RBP13.75□□□□□ -0.21
CCDC171-209ENST00000498725 CCDC144AA2RUR9 1427 aa13.74□□□□□ -0.21
CCDC171-209ENST00000498725 PPP4R3CPQ6ZMV5 832 aa13.74□□□□□ -0.21
CCDC171-209ENST00000498725 KRT27Q7Z3Y8 459 aa13.74□□□□□ -0.21
CCDC171-209ENST00000498725 VPS72Q15906 364 aa13.73□□□□□ -0.21
CCDC171-209ENST00000498725 TNS3Q68CZ2 1445 aa13.73□□□□□ -0.21
CCDC171-209ENST00000498725 SAFB2Q14151 953 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCDC171-209ENST00000498725 BAG6P46379 1132 aa13.71□□□□□ -0.21
CCDC171-209ENST00000498725 PSME1Q06323 249 aa13.71□□□□□ -0.21
CCDC171-209ENST00000498725 FAM182BQ5T319 152 aa13.71□□□□□ -0.21
CCDC171-209ENST00000498725 PHF8Q9UPP1 1060 aa13.71□□□□□ -0.21
CCDC171-209ENST00000498725 TECPR2O15040 1411 aa13.71□□□□□ -0.22
CCDC171-209ENST00000498725 RGPD1P0DJD0 1748 aa13.7□□□□□ -0.22
CCDC171-209ENST00000498725 NRAPQ86VF7 1730 aa13.7□□□□□ -0.22
CCDC171-209ENST00000498725 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
CCDC171-209ENST00000498725 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
CCDC171-209ENST00000498725 YTHDC2Q9H6S0 1430 aaKnown RBP13.7□□□□□ -0.22
CCDC171-209ENST00000498725 ABCC11Q96J66 1382 aa13.7□□□□□ -0.22
CCDC171-209ENST00000498725 HRCP23327 699 aa13.69□□□□□ -0.22
CCDC171-209ENST00000498725 EN1Q05925 392 aaPredicted RBP13.69□□□□□ -0.22
CCDC171-209ENST00000498725 PMFBP1Q8TBY8 1022 aa13.69□□□□□ -0.22
CCDC171-209ENST00000498725 FAM83GA6ND36 823 aa13.68□□□□□ -0.22
CCDC171-209ENST00000498725 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
CCDC171-209ENST00000498725 R3HDM1Q15032 1099 aaKnown RBP13.67□□□□□ -0.22
CCDC171-209ENST00000498725 ANKRD30BQ9BXX2 1392 aa13.67□□□□□ -0.22
CCDC171-209ENST00000498725 ONECUT3O60422 494 aaPredicted RBP13.66□□□□□ -0.22
CCDC171-209ENST00000498725 BTG4Q9NY30 223 aa13.66□□□□□ -0.22
CCDC171-209ENST00000498725 TNS1Q9HBL0 1735 aaKnown RBP13.66□□□□□ -0.22
CCDC171-209ENST00000498725 NRXN1Q9ULB1 1477 aa13.66□□□□□ -0.22
CCDC171-209ENST00000498725 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
CCDC171-209ENST00000498725 PIK3C2GO75747 1445 aa13.65□□□□□ -0.22
CCDC171-209ENST00000498725 SPATA31E1Q6ZUB1 1445 aa13.65□□□□□ -0.22
CCDC171-209ENST00000498725 TRPM3Q9HCF6 1732 aaPredicted RBP13.65□□□□□ -0.22
CCDC171-209ENST00000498725 ARHGEF10O15013 1369 aa13.65□□□□□ -0.22
CCDC171-209ENST00000498725 SBNO1A3KN83 1393 aa13.64□□□□□ -0.23
CCDC171-209ENST00000498725 PRAM1Q96QH2 718 aa13.64□□□□□ -0.23
CCDC171-209ENST00000498725 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
CCDC171-209ENST00000498725 CFAP70Q5T0N1 1121 aa13.63□□□□□ -0.23
CCDC171-209ENST00000498725 POGKQ9P215 609 aa13.63□□□□□ -0.23
CCDC171-209ENST00000498725 DHX57Q6P158 1386 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms