RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 PNPLA6Q8IY17 1366 aa17.94■□□□□ 0.46
CNOT4-211ENST00000498534 ADAMTS2O95450 1211 aa17.93■□□□□ 0.46
CNOT4-211ENST00000498534 MPHOSPH9Q99550 1183 aa17.93■□□□□ 0.46
CNOT4-211ENST00000498534 CCDC144AA2RUR9 1427 aa17.92■□□□□ 0.46
CNOT4-211ENST00000498534 RBM6P78332 1123 aaKnown RBP17.92■□□□□ 0.46
CNOT4-211ENST00000498534 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
CNOT4-211ENST00000498534 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
CNOT4-211ENST00000498534 STK26Q9P289 416 aa17.91■□□□□ 0.46
CNOT4-211ENST00000498534 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
CNOT4-211ENST00000498534 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
CNOT4-211ENST00000498534 CDK12Q9NYV4 1490 aaPredicted RBP17.9■□□□□ 0.46
CNOT4-211ENST00000498534 PPLO60437 1756 aa17.9■□□□□ 0.46
CNOT4-211ENST00000498534 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
CNOT4-211ENST00000498534 ADGRF5Q8IZF2 1346 aa17.9■□□□□ 0.46
CNOT4-211ENST00000498534 ANKRD30BQ9BXX2 1392 aa17.89■□□□□ 0.45
CNOT4-211ENST00000498534 NPHP3Q7Z494 1330 aa17.88■□□□□ 0.45
CNOT4-211ENST00000498534 WAPLQ7Z5K2 1190 aa17.87■□□□□ 0.45
CNOT4-211ENST00000498534 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
CNOT4-211ENST00000498534 USP21Q9UK80 565 aa17.86■□□□□ 0.45
CNOT4-211ENST00000498534 FOXO3O43524 673 aa17.85■□□□□ 0.45
CNOT4-211ENST00000498534 LAMC1P11047 1609 aa17.85■□□□□ 0.45
CNOT4-211ENST00000498534 SPATA31E1Q6ZUB1 1445 aa17.84■□□□□ 0.45
CNOT4-211ENST00000498534 LRPPRCP42704 1394 aaKnown RBP17.84■□□□□ 0.45
CNOT4-211ENST00000498534 ABCC11Q96J66 1382 aa17.84■□□□□ 0.45
CNOT4-211ENST00000498534 NUTM2FA1L443 756 aa17.84■□□□□ 0.45
CNOT4-211ENST00000498534 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
CNOT4-211ENST00000498534 TRPC5Q9UL62 973 aaPredicted RBP17.84■□□□□ 0.45
CNOT4-211ENST00000498534 KCNA4P22459 653 aa17.83■□□□□ 0.44
CNOT4-211ENST00000498534 FNBP4Q8N3X1 1017 aaPredicted RBP17.83■□□□□ 0.44
CNOT4-211ENST00000498534 XPCQ01831 940 aaPredicted RBP17.81■□□□□ 0.44
CNOT4-211ENST00000498534 TECPR2O15040 1411 aa17.81■□□□□ 0.44
CNOT4-211ENST00000498534 CDC42BPGQ6DT37 1551 aa17.8■□□□□ 0.44
CNOT4-211ENST00000498534 SIRT1Q96EB6 747 aa17.8■□□□□ 0.44
CNOT4-211ENST00000498534 C14orf93Q9H972 538 aaKnown RBP17.79■□□□□ 0.44
CNOT4-211ENST00000498534 RGS12O14924 1447 aa17.79■□□□□ 0.44
CNOT4-211ENST00000498534 PIK3C2GO75747 1445 aa17.77■□□□□ 0.44
CNOT4-211ENST00000498534 YTHDC2Q9H6S0 1430 aaKnown RBP17.77■□□□□ 0.44
CNOT4-211ENST00000498534 DHX57Q6P158 1386 aaKnown RBP17.77■□□□□ 0.43
CNOT4-211ENST00000498534 PLEKHH1Q9ULM0 1364 aa17.76■□□□□ 0.43
CNOT4-211ENST00000498534 PXDNQ92626 1479 aa17.75■□□□□ 0.43
CNOT4-211ENST00000498534 CFAP70Q5T0N1 1121 aa17.75■□□□□ 0.43
CNOT4-211ENST00000498534 KRT28Q7Z3Y7 464 aa17.75■□□□□ 0.43
CNOT4-211ENST00000498534 ATAD2Q6PL18 1390 aa17.75■□□□□ 0.43
CNOT4-211ENST00000498534 COL22A1Q8NFW1 1626 aaPredicted RBP17.75■□□□□ 0.43
CNOT4-211ENST00000498534 IFT172Q9UG01 1749 aa17.75■□□□□ 0.43
CNOT4-211ENST00000498534 PSME1Q06323 249 aa17.74■□□□□ 0.43
CNOT4-211ENST00000498534 MYOM2P54296 1465 aa17.74■□□□□ 0.43
CNOT4-211ENST00000498534 SPATA31A3Q5VYP0 1347 aa17.72■□□□□ 0.43
CNOT4-211ENST00000498534 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
CNOT4-211ENST00000498534 GJD4Q96KN9 370 aaPredicted RBP17.72■□□□□ 0.43
CNOT4-211ENST00000498534 POGKQ9P215 609 aa17.72■□□□□ 0.43
CNOT4-211ENST00000498534 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
CNOT4-211ENST00000498534 ATRNO75882 1429 aa17.72■□□□□ 0.43
CNOT4-211ENST00000498534 SAFB2Q14151 953 aaKnown RBP eCLIP17.71■□□□□ 0.43
CNOT4-211ENST00000498534 PRAM1Q96QH2 718 aa17.71■□□□□ 0.43
CNOT4-211ENST00000498534 KNDC1Q76NI1 1749 aa17.71■□□□□ 0.43
CNOT4-211ENST00000498534 BCL9LQ86UU0 1499 aa17.69■□□□□ 0.42
CNOT4-211ENST00000498534 UNC5CLQ8IV45 518 aa17.69■□□□□ 0.42
CNOT4-211ENST00000498534 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
CNOT4-211ENST00000498534 LMOD2Q6P5Q4 547 aa17.68■□□□□ 0.42
CNOT4-211ENST00000498534 CCDC125Q86Z20 511 aa17.68■□□□□ 0.42
CNOT4-211ENST00000498534 KIF1AQ12756 1690 aa17.67■□□□□ 0.42
CNOT4-211ENST00000498534 RAB3GAP2Q9H2M9 1393 aa17.67■□□□□ 0.42
CNOT4-211ENST00000498534 NRXN1Q9ULB1 1477 aa17.67■□□□□ 0.42
CNOT4-211ENST00000498534 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
CNOT4-211ENST00000498534 MARF1Q9Y4F3 1742 aaKnown RBP17.66■□□□□ 0.42
CNOT4-211ENST00000498534 PLEKHG5O94827 1062 aa17.65■□□□□ 0.42
CNOT4-211ENST00000498534 STAC3Q96MF2 364 aa17.65■□□□□ 0.42
CNOT4-211ENST00000498534 PMFBP1Q8TBY8 1022 aa17.64■□□□□ 0.41
CNOT4-211ENST00000498534 CABLES1Q8TDN4 633 aa17.64■□□□□ 0.41
CNOT4-211ENST00000498534 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
CNOT4-211ENST00000498534 TRAK1Q9UPV9 953 aa17.64■□□□□ 0.41
CNOT4-211ENST00000498534 ZRANB1Q9UGI0 708 aa17.63■□□□□ 0.41
CNOT4-211ENST00000498534 SBNO1A3KN83 1393 aa17.63■□□□□ 0.41
CNOT4-211ENST00000498534 RGPD8O14715 1765 aaPredicted RBP17.63■□□□□ 0.41
CNOT4-211ENST00000498534 ARHGEF10O15013 1369 aa17.62■□□□□ 0.41
CNOT4-211ENST00000498534 TNS3Q68CZ2 1445 aa17.62■□□□□ 0.41
CNOT4-211ENST00000498534 CCDC9Q9Y3X0 531 aaKnown RBP17.61■□□□□ 0.41
CNOT4-211ENST00000498534 SLIT2O94813 1529 aa17.61■□□□□ 0.41
CNOT4-211ENST00000498534 HRCP23327 699 aa17.6■□□□□ 0.41
CNOT4-211ENST00000498534 VPS72Q15906 364 aa17.6■□□□□ 0.41
CNOT4-211ENST00000498534 HIRIP3Q9BW71 556 aaPredicted RBP17.6■□□□□ 0.41
CNOT4-211ENST00000498534 ANKARQ7Z5J8 1434 aa17.6■□□□□ 0.41
CNOT4-211ENST00000498534 DLC1Q96QB1 1528 aa17.6■□□□□ 0.41
CNOT4-211ENST00000498534 RALGAPBQ86X10 1494 aa17.59■□□□□ 0.41
CNOT4-211ENST00000498534 EIF3AQ14152 1382 aaKnown RBP17.59■□□□□ 0.41
CNOT4-211ENST00000498534 GPRASP1Q5JY77 1395 aa17.59■□□□□ 0.41
CNOT4-211ENST00000498534 MINK1Q8N4C8 1332 aaPredicted RBP17.59■□□□□ 0.41
CNOT4-211ENST00000498534 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.4
CNOT4-211ENST00000498534 USP32Q8NFA0 1604 aa17.58■□□□□ 0.4
CNOT4-211ENST00000498534 EP400Q96L91 3159 aa17.57■□□□□ 0.4
CNOT4-211ENST00000498534 FAM83GA6ND36 823 aa17.57■□□□□ 0.4
CNOT4-211ENST00000498534 WASLO00401 505 aaPredicted RBP17.57■□□□□ 0.4
CNOT4-211ENST00000498534 SEPT12Q8IYM1 358 aa17.57■□□□□ 0.4
CNOT4-211ENST00000498534 SF3B2Q13435 895 aaKnown RBP17.56■□□□□ 0.4
CNOT4-211ENST00000498534 NGDNQ8NEJ9 315 aaKnown RBP17.56■□□□□ 0.4
CNOT4-211ENST00000498534 ONECUT3O60422 494 aaPredicted RBP17.55■□□□□ 0.4
CNOT4-211ENST00000498534 ADGRB1O14514 1584 aa17.54■□□□□ 0.4
CNOT4-211ENST00000498534 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
CNOT4-211ENST00000498534 GLI3P10071 1580 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms