RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 ATRNO75882 1429 aa18.22■□□□□ 0.51
THBS3-209ENST00000498500 EP400Q96L91 3159 aa18.19■□□□□ 0.5
THBS3-209ENST00000498500 ESCO1Q5FWF5 840 aa18.19■□□□□ 0.5
THBS3-209ENST00000498500 CCDC125Q86Z20 511 aa18.19■□□□□ 0.5
THBS3-209ENST00000498500 HFM1A2PYH4 1435 aa18.18■□□□□ 0.5
THBS3-209ENST00000498500 NPHP3Q7Z494 1330 aa18.18■□□□□ 0.5
THBS3-209ENST00000498500 MYOM2P54296 1465 aa18.16■□□□□ 0.5
THBS3-209ENST00000498500 BCL9LQ86UU0 1499 aa18.16■□□□□ 0.5
THBS3-209ENST00000498500 PPLO60437 1756 aa18.16■□□□□ 0.5
THBS3-209ENST00000498500 XPCQ01831 940 aaPredicted RBP18.15■□□□□ 0.5
THBS3-209ENST00000498500 GJD4Q96KN9 370 aaPredicted RBP18.15■□□□□ 0.5
THBS3-209ENST00000498500 NAIPQ13075 1403 aa18.15■□□□□ 0.5
THBS3-209ENST00000498500 PRAG1Q86YV5 1406 aa18.15■□□□□ 0.5
THBS3-209ENST00000498500 FOXO3O43524 673 aa18.14■□□□□ 0.49
THBS3-209ENST00000498500 RPGRIP1LQ68CZ1 1315 aa18.14■□□□□ 0.49
THBS3-209ENST00000498500 PXDNQ92626 1479 aa18.14■□□□□ 0.49
THBS3-209ENST00000498500 CDC42BPGQ6DT37 1551 aa18.13■□□□□ 0.49
THBS3-209ENST00000498500 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.12■□□□□ 0.49
THBS3-209ENST00000498500 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
THBS3-209ENST00000498500 LRPPRCP42704 1394 aaKnown RBP18.11■□□□□ 0.49
THBS3-209ENST00000498500 BRWD3Q6RI45 1802 aa18.1■□□□□ 0.49
THBS3-209ENST00000498500 UNC5CLQ8IV45 518 aa18.08■□□□□ 0.48
THBS3-209ENST00000498500 BLMP54132 1417 aaPredicted RBP18.07■□□□□ 0.48
THBS3-209ENST00000498500 STK26Q9P289 416 aa18.07■□□□□ 0.48
THBS3-209ENST00000498500 GLI3P10071 1580 aa18.07■□□□□ 0.48
THBS3-209ENST00000498500 RALGAPBQ86X10 1494 aa18.07■□□□□ 0.48
THBS3-209ENST00000498500 SF3B2Q13435 895 aaKnown RBP18.06■□□□□ 0.48
THBS3-209ENST00000498500 WAPLQ7Z5K2 1190 aa18.06■□□□□ 0.48
THBS3-209ENST00000498500 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
THBS3-209ENST00000498500 SLIT2O94813 1529 aa18.04■□□□□ 0.48
THBS3-209ENST00000498500 HAP1P54257 671 aaPredicted RBP18.04■□□□□ 0.48
THBS3-209ENST00000498500 DEFB132Q7Z7B7 95 aa18.04■□□□□ 0.48
THBS3-209ENST00000498500 FMN2Q9NZ56 1722 aa18.03■□□□□ 0.48
THBS3-209ENST00000498500 SPATA31A3Q5VYP0 1347 aa18.03■□□□□ 0.48
THBS3-209ENST00000498500 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
THBS3-209ENST00000498500 USP32Q8NFA0 1604 aa18.03■□□□□ 0.48
THBS3-209ENST00000498500 RGPD8O14715 1765 aaPredicted RBP18.03■□□□□ 0.48
THBS3-209ENST00000498500 ADGRF5Q8IZF2 1346 aa18.02■□□□□ 0.48
THBS3-209ENST00000498500 KNDC1Q76NI1 1749 aa18.01■□□□□ 0.47
THBS3-209ENST00000498500 KRT28Q7Z3Y7 464 aa18.01■□□□□ 0.47
THBS3-209ENST00000498500 SEPT12Q8IYM1 358 aa18.01■□□□□ 0.47
THBS3-209ENST00000498500 CCDC144AA2RUR9 1427 aa18■□□□□ 0.47
THBS3-209ENST00000498500 TECPR2O15040 1411 aa18■□□□□ 0.47
THBS3-209ENST00000498500 PLEKHG5O94827 1062 aa18■□□□□ 0.47
THBS3-209ENST00000498500 RGL3Q3MIN7 710 aa18■□□□□ 0.47
THBS3-209ENST00000498500 CCDC9Q9Y3X0 531 aaKnown RBP18■□□□□ 0.47
THBS3-209ENST00000498500 PLCH1Q4KWH8 1693 aa17.99■□□□□ 0.47
THBS3-209ENST00000498500 TMEM132EQ6IEE7 984 aa17.99■□□□□ 0.47
THBS3-209ENST00000498500 PLEKHH1Q9ULM0 1364 aa17.99■□□□□ 0.47
THBS3-209ENST00000498500 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
THBS3-209ENST00000498500 NWD2Q9ULI1 1742 aa17.98■□□□□ 0.47
THBS3-209ENST00000498500 ABCC11Q96J66 1382 aa17.98■□□□□ 0.47
THBS3-209ENST00000498500 PSME1Q06323 249 aa17.97■□□□□ 0.47
THBS3-209ENST00000498500 VPS72Q15906 364 aa17.97■□□□□ 0.47
THBS3-209ENST00000498500 CABLES1Q8TDN4 633 aa17.97■□□□□ 0.47
THBS3-209ENST00000498500 LMOD2Q6P5Q4 547 aa17.96■□□□□ 0.47
THBS3-209ENST00000498500 KRT27Q7Z3Y8 459 aa17.96■□□□□ 0.47
THBS3-209ENST00000498500 LRP5O75197 1615 aa17.96■□□□□ 0.47
THBS3-209ENST00000498500 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
THBS3-209ENST00000498500 A0A0G2JS52 829 aa17.95■□□□□ 0.46
THBS3-209ENST00000498500 MYT1Q01538 1121 aa17.95■□□□□ 0.46
THBS3-209ENST00000498500 PHF8Q9UPP1 1060 aa17.95■□□□□ 0.46
THBS3-209ENST00000498500 TNS3Q68CZ2 1445 aa17.95■□□□□ 0.46
THBS3-209ENST00000498500 YTHDC2Q9H6S0 1430 aaKnown RBP17.94■□□□□ 0.46
THBS3-209ENST00000498500 ABCA3Q99758 1704 aa17.94■□□□□ 0.46
THBS3-209ENST00000498500 ONECUT3O60422 494 aaPredicted RBP17.93■□□□□ 0.46
THBS3-209ENST00000498500 PSDA5PKW4 1024 aaPredicted RBP17.92■□□□□ 0.46
THBS3-209ENST00000498500 BAG6P46379 1132 aa17.92■□□□□ 0.46
THBS3-209ENST00000498500 SPATA31E1Q6ZUB1 1445 aa17.91■□□□□ 0.46
THBS3-209ENST00000498500 PIK3C2GO75747 1445 aa17.9■□□□□ 0.46
THBS3-209ENST00000498500 SBNO1A3KN83 1393 aa17.9■□□□□ 0.46
THBS3-209ENST00000498500 ARHGEF10O15013 1369 aa17.9■□□□□ 0.46
THBS3-209ENST00000498500 SIRT1Q96EB6 747 aa17.89■□□□□ 0.45
THBS3-209ENST00000498500 NRXN1Q9ULB1 1477 aa17.88■□□□□ 0.45
THBS3-209ENST00000498500 FAM83GA6ND36 823 aa17.88■□□□□ 0.45
THBS3-209ENST00000498500 NRAPQ86VF7 1730 aa17.87■□□□□ 0.45
THBS3-209ENST00000498500 HRCP23327 699 aa17.87■□□□□ 0.45
THBS3-209ENST00000498500 SAFB2Q14151 953 aaKnown RBP eCLIP17.87■□□□□ 0.45
THBS3-209ENST00000498500 FAM98CQ17RN3 349 aaKnown RBP17.87■□□□□ 0.45
THBS3-209ENST00000498500 RGPD1P0DJD0 1748 aa17.86■□□□□ 0.45
THBS3-209ENST00000498500 PMFBP1Q8TBY8 1022 aa17.86■□□□□ 0.45
THBS3-209ENST00000498500 DHX57Q6P158 1386 aaKnown RBP17.86■□□□□ 0.45
THBS3-209ENST00000498500 C14orf93Q9H972 538 aaKnown RBP17.85■□□□□ 0.45
THBS3-209ENST00000498500 BTG4Q9NY30 223 aa17.85■□□□□ 0.45
THBS3-209ENST00000498500 EN1Q05925 392 aaPredicted RBP17.84■□□□□ 0.45
THBS3-209ENST00000498500 PRAM1Q96QH2 718 aa17.84■□□□□ 0.45
THBS3-209ENST00000498500 MPHOSPH9Q99550 1183 aa17.84■□□□□ 0.45
THBS3-209ENST00000498500 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
THBS3-209ENST00000498500 CFAP70Q5T0N1 1121 aa17.83■□□□□ 0.44
THBS3-209ENST00000498500 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
THBS3-209ENST00000498500 TRPM3Q9HCF6 1732 aaPredicted RBP17.82■□□□□ 0.44
THBS3-209ENST00000498500 FAM182BQ5T319 152 aa17.82■□□□□ 0.44
THBS3-209ENST00000498500 POGKQ9P215 609 aa17.82■□□□□ 0.44
THBS3-209ENST00000498500 R3HDM1Q15032 1099 aaKnown RBP17.8■□□□□ 0.44
THBS3-209ENST00000498500 ALS2Q96Q42 1657 aa17.8■□□□□ 0.44
THBS3-209ENST00000498500 ANKARQ7Z5J8 1434 aa17.8■□□□□ 0.44
THBS3-209ENST00000498500 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
THBS3-209ENST00000498500 TNS1Q9HBL0 1735 aaKnown RBP17.78■□□□□ 0.44
THBS3-209ENST00000498500 SPATA31A5Q5VU36 1347 aa17.77■□□□□ 0.44
THBS3-209ENST00000498500 SPATA31A7Q8IWB4 1347 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms