RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 PRAG1Q86YV5 1406 aa21.11■□□□□ 0.97
CCDC58-207ENST00000498466 RPGRIP1LQ68CZ1 1315 aa21.1■□□□□ 0.97
CCDC58-207ENST00000498466 NPHP3Q7Z494 1330 aa21.1■□□□□ 0.97
CCDC58-207ENST00000498466 ZRANB1Q9UGI0 708 aa21.09■□□□□ 0.97
CCDC58-207ENST00000498466 NAIPQ13075 1403 aa21.09■□□□□ 0.97
CCDC58-207ENST00000498466 COL22A1Q8NFW1 1626 aaPredicted RBP21.08■□□□□ 0.97
CCDC58-207ENST00000498466 MYOM2P54296 1465 aa21.07■□□□□ 0.96
CCDC58-207ENST00000498466 XPCQ01831 940 aaPredicted RBP21.06■□□□□ 0.96
CCDC58-207ENST00000498466 FOXO3O43524 673 aa21.05■□□□□ 0.96
CCDC58-207ENST00000498466 BCL9LQ86UU0 1499 aa21.05■□□□□ 0.96
CCDC58-207ENST00000498466 CCDC125Q86Z20 511 aa21.04■□□□□ 0.96
CCDC58-207ENST00000498466 SLC4A1APQ9BWU0 796 aaKnown RBP21.04■□□□□ 0.96
CCDC58-207ENST00000498466 CDC42BPGQ6DT37 1551 aa21.04■□□□□ 0.96
CCDC58-207ENST00000498466 PXDNQ92626 1479 aa21.03■□□□□ 0.96
CCDC58-207ENST00000498466 LRPPRCP42704 1394 aaKnown RBP21.02■□□□□ 0.96
CCDC58-207ENST00000498466 NUTM2FA1L443 756 aa21.02■□□□□ 0.96
CCDC58-207ENST00000498466 GJD4Q96KN9 370 aaPredicted RBP21.02■□□□□ 0.96
CCDC58-207ENST00000498466 STK26Q9P289 416 aa21.01■□□□□ 0.95
CCDC58-207ENST00000498466 RRBP1Q9P2E9 1410 aaKnown RBP21.01■□□□□ 0.95
CCDC58-207ENST00000498466 PPLO60437 1756 aa21■□□□□ 0.95
CCDC58-207ENST00000498466 WAPLQ7Z5K2 1190 aa20.99■□□□□ 0.95
CCDC58-207ENST00000498466 ADGRF5Q8IZF2 1346 aa20.98■□□□□ 0.95
CCDC58-207ENST00000498466 MARF1Q9Y4F3 1742 aaKnown RBP20.96■□□□□ 0.95
CCDC58-207ENST00000498466 UNC5CLQ8IV45 518 aa20.96■□□□□ 0.95
CCDC58-207ENST00000498466 RGL3Q3MIN7 710 aa20.95■□□□□ 0.94
CCDC58-207ENST00000498466 TECPR2O15040 1411 aa20.94■□□□□ 0.94
CCDC58-207ENST00000498466 RALGAPBQ86X10 1494 aa20.94■□□□□ 0.94
CCDC58-207ENST00000498466 SPATA31A3Q5VYP0 1347 aa20.93■□□□□ 0.94
CCDC58-207ENST00000498466 TMEM132EQ6IEE7 984 aa20.92■□□□□ 0.94
CCDC58-207ENST00000498466 PLEKHH1Q9ULM0 1364 aa20.92■□□□□ 0.94
CCDC58-207ENST00000498466 CCDC144AA2RUR9 1427 aa20.92■□□□□ 0.94
CCDC58-207ENST00000498466 BLMP54132 1417 aaPredicted RBP20.92■□□□□ 0.94
CCDC58-207ENST00000498466 SLIT2O94813 1529 aa20.92■□□□□ 0.94
CCDC58-207ENST00000498466 HAP1P54257 671 aaPredicted RBP20.91■□□□□ 0.94
CCDC58-207ENST00000498466 ABCC11Q96J66 1382 aa20.91■□□□□ 0.94
CCDC58-207ENST00000498466 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.91■□□□□ 0.94
CCDC58-207ENST00000498466 GLI3P10071 1580 aa20.9■□□□□ 0.94
CCDC58-207ENST00000498466 ANKRD30BQ9BXX2 1392 aa20.9■□□□□ 0.94
CCDC58-207ENST00000498466 KRT28Q7Z3Y7 464 aa20.9■□□□□ 0.94
CCDC58-207ENST00000498466 SF3B2Q13435 895 aaKnown RBP20.88■□□□□ 0.93
CCDC58-207ENST00000498466 KIF1AQ12756 1690 aa20.87■□□□□ 0.93
CCDC58-207ENST00000498466 USP32Q8NFA0 1604 aa20.87■□□□□ 0.93
CCDC58-207ENST00000498466 PLEKHG5O94827 1062 aa20.87■□□□□ 0.93
CCDC58-207ENST00000498466 DEFB132Q7Z7B7 95 aa20.87■□□□□ 0.93
CCDC58-207ENST00000498466 FMN2Q9NZ56 1722 aa20.87■□□□□ 0.93
CCDC58-207ENST00000498466 SPATA31E1Q6ZUB1 1445 aa20.87■□□□□ 0.93
CCDC58-207ENST00000498466 SEPT12Q8IYM1 358 aa20.86■□□□□ 0.93
CCDC58-207ENST00000498466 CCDC9Q9Y3X0 531 aaKnown RBP20.86■□□□□ 0.93
CCDC58-207ENST00000498466 KNDC1Q76NI1 1749 aa20.86■□□□□ 0.93
CCDC58-207ENST00000498466 YTHDC2Q9H6S0 1430 aaKnown RBP20.86■□□□□ 0.93
CCDC58-207ENST00000498466 PSME1Q06323 249 aa20.85■□□□□ 0.93
CCDC58-207ENST00000498466 CABLES1Q8TDN4 633 aa20.85■□□□□ 0.93
CCDC58-207ENST00000498466 PIK3C2GO75747 1445 aa20.85■□□□□ 0.93
CCDC58-207ENST00000498466 TNS3Q68CZ2 1445 aa20.85■□□□□ 0.93
CCDC58-207ENST00000498466 VPS72Q15906 364 aa20.84■□□□□ 0.93
CCDC58-207ENST00000498466 PHF8Q9UPP1 1060 aa20.84■□□□□ 0.93
CCDC58-207ENST00000498466 LMOD2Q6P5Q4 547 aa20.83■□□□□ 0.93
CCDC58-207ENST00000498466 IFT172Q9UG01 1749 aa20.81■□□□□ 0.92
CCDC58-207ENST00000498466 SIRT1Q96EB6 747 aa20.81■□□□□ 0.92
CCDC58-207ENST00000498466 MPHOSPH9Q99550 1183 aa20.81■□□□□ 0.92
CCDC58-207ENST00000498466 KRT27Q7Z3Y8 459 aa20.8■□□□□ 0.92
CCDC58-207ENST00000498466 BRWD3Q6RI45 1802 aa20.8■□□□□ 0.92
CCDC58-207ENST00000498466 A0A0G2JS52 829 aa20.79■□□□□ 0.92
CCDC58-207ENST00000498466 MYT1Q01538 1121 aa20.79■□□□□ 0.92
CCDC58-207ENST00000498466 SBNO1A3KN83 1393 aa20.79■□□□□ 0.92
CCDC58-207ENST00000498466 ARHGEF10O15013 1369 aa20.78■□□□□ 0.92
CCDC58-207ENST00000498466 ONECUT3O60422 494 aaPredicted RBP20.78■□□□□ 0.92
CCDC58-207ENST00000498466 SAFB2Q14151 953 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCDC58-207ENST00000498466 NRXN1Q9ULB1 1477 aa20.77■□□□□ 0.92
CCDC58-207ENST00000498466 DHX57Q6P158 1386 aaKnown RBP20.77■□□□□ 0.92
CCDC58-207ENST00000498466 C14orf93Q9H972 538 aaKnown RBP20.77■□□□□ 0.92
CCDC58-207ENST00000498466 PLCH1Q4KWH8 1693 aa20.77■□□□□ 0.91
CCDC58-207ENST00000498466 PRAM1Q96QH2 718 aa20.76■□□□□ 0.91
CCDC58-207ENST00000498466 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
CCDC58-207ENST00000498466 FAM83GA6ND36 823 aa20.75■□□□□ 0.91
CCDC58-207ENST00000498466 CFAP70Q5T0N1 1121 aa20.75■□□□□ 0.91
CCDC58-207ENST00000498466 PMFBP1Q8TBY8 1022 aa20.75■□□□□ 0.91
CCDC58-207ENST00000498466 RGPD8O14715 1765 aaPredicted RBP20.74■□□□□ 0.91
CCDC58-207ENST00000498466 BAG6P46379 1132 aa20.74■□□□□ 0.91
CCDC58-207ENST00000498466 PSDA5PKW4 1024 aaPredicted RBP20.72■□□□□ 0.91
CCDC58-207ENST00000498466 FAM98CQ17RN3 349 aaKnown RBP20.72■□□□□ 0.91
CCDC58-207ENST00000498466 POGKQ9P215 609 aa20.72■□□□□ 0.91
CCDC58-207ENST00000498466 ABCA3Q99758 1704 aa20.72■□□□□ 0.91
CCDC58-207ENST00000498466 BTG4Q9NY30 223 aa20.71■□□□□ 0.91
CCDC58-207ENST00000498466 LRP5O75197 1615 aa20.7■□□□□ 0.9
CCDC58-207ENST00000498466 ANKARQ7Z5J8 1434 aa20.7■□□□□ 0.9
CCDC58-207ENST00000498466 HRCP23327 699 aa20.67■□□□□ 0.9
CCDC58-207ENST00000498466 HIRIP3Q9BW71 556 aaPredicted RBP20.66■□□□□ 0.9
CCDC58-207ENST00000498466 GPRASP1Q5JY77 1395 aa20.66■□□□□ 0.9
CCDC58-207ENST00000498466 NRAPQ86VF7 1730 aa20.65■□□□□ 0.9
CCDC58-207ENST00000498466 DLC1Q96QB1 1528 aa20.65■□□□□ 0.9
CCDC58-207ENST00000498466 EN1Q05925 392 aaPredicted RBP20.65■□□□□ 0.9
CCDC58-207ENST00000498466 FAM182BQ5T319 152 aa20.64■□□□□ 0.89
CCDC58-207ENST00000498466 TRAK1Q9UPV9 953 aa20.63■□□□□ 0.89
CCDC58-207ENST00000498466 ADGRB2O60241 1585 aa20.63■□□□□ 0.89
CCDC58-207ENST00000498466 COL14A1Q05707 1796 aaKnown RBP20.62■□□□□ 0.89
CCDC58-207ENST00000498466 MINK1Q8N4C8 1332 aaPredicted RBP20.62■□□□□ 0.89
CCDC58-207ENST00000498466 ACIN1Q9UKV3 1341 aaKnown RBP20.62■□□□□ 0.89
CCDC58-207ENST00000498466 TRPM3Q9HCF6 1732 aaPredicted RBP20.61■□□□□ 0.89
CCDC58-207ENST00000498466 EIF3AQ14152 1382 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms